CX043387 | Citrus Genome Database

Overview


Name	CX043387
Unique Name	CX043387
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	808

Libraries


Library Name	Type
Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig9802	contig	Csv1_Contig9802:54..860.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CX043387 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 2.818e-76
Identity = 99/166 (59.64%), Postives = 121/166 (72.89%), Query Frame = 3

Query:  309 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFF 803
            K ++  FFAQT HETTGGW  AP G YAWGYC++R+                 PG+ Y+GRGPIQ++ N NY  CG A+GVDLLNNPDL+ATDPV+SFKSA+WFWMT Q PKPSCH+VII  W+PSA D  A RLPG+G+ TNIINGG+ECG   +  V++RIGF+
Sbjct:  132 KREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSAGDRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFY 297

HSP 2 Score: 89.3521 bits (220), Expect = 2.818e-76
Identity = 40/63 (63.49%), Postives = 50/63 (79.37%), Query Frame = 2

Query:  143 GGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 331
            GG+LG IIS  MF+ +L +RND  C  +GFY+Y+AFI AA++FPGFG SG+ T RKREIAAFF
Sbjct:   77 GGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFF 139

[Close]

BLAST of CX043387 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3)

HSP 1 Score: 218.009 bits (554), Expect = 3.675e-76
Identity = 99/166 (59.64%), Postives = 122/166 (73.49%), Query Frame = 3

Query:  309 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFF 803
            K+++  FF QT HETTGGW  AP G Y+WGYC+ ++ +PAS             G+ YYGRGP+QL+WN NY  CG A+GVDLLNNPDL+A D V++FK+AIWFWMTAQPPKPSCH VI  +W+PS  D  AGRLPGYG+ TNIINGG+ECG   +  V +RIGF+
Sbjct:  138 KKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSATWPCASGKRYYGRGPMQLSWNYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMTAQPPKPSCHAVIAGQWQPSDADRAAGRLPGYGVITNIINGGLECGRGQDGRVADRIGFY 303

HSP 2 Score: 88.9669 bits (219), Expect = 3.675e-76
Identity = 39/62 (62.90%), Postives = 50/62 (80.65%), Query Frame = 2

Query:  146 GELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 331
            G+L  IIS   F+D+L +RNDA CPARGFYTY+AFI AA++FPGFG +G+   RK+E+AAFF
Sbjct:   84 GDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFF 145

[Close]

BLAST of CX043387 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 6.252e-76
Identity = 98/166 (59.04%), Postives = 121/166 (72.89%), Query Frame = 3

Query:  309 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFF 803
            K ++  FFAQT HETTGGW  AP G YAWGYC++R+                 PG+ Y+GRGPIQ++ N NY  CG A+GVDLLNNPDL+ATDPV+SFKSA+WFWMT Q PKPSCH+VII  W+PS+ D  A RLPG+G+ TNIINGG+ECG   +  V++RIGF+
Sbjct:  127 KREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSSADRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFY 292

HSP 2 Score: 90.1225 bits (222), Expect = 6.252e-76
Identity = 46/82 (56.10%), Postives = 57/82 (69.51%), Query Frame = 2

Query:   92 CGSGVVCGERDTGHGTD--GGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 331
            CG G  C  +  G  T   GG+LG IIS  MF+ +L +RND  C  +GFY+Y+AFI AA++FPGFG SG+ T RKREIAAFF
Sbjct:   54 CGPGN-CQSQCPGGPTPPGGGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFF 134

[Close]

BLAST of CX043387 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.387e-75
Identity = 94/166 (56.63%), Postives = 123/166 (74.10%), Query Frame = 3

Query:  309 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFF 803
            K+++  FF QT HETTGGW  AP G Y+WGYC+ ++ +P+S+            G+ YYGRGP+QL+WN NY +CG A+G DLLNNPDL++ DPV++FK+AIWFWMT Q PKPSCH VI+ +W+PS  D  AGR+PGYG+ TNIINGG+ECG   +  V +RIGF+
Sbjct:  123 KKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAEWPCASGKSYYGRGPMQLSWNYNYGQCGRAIGSDLLNNPDLVSNDPVIAFKAAIWFWMTPQSPKPSCHAVIVGQWQPSDADRAAGRVPGYGVITNIINGGLECGRGQDARVADRIGFY 288

HSP 2 Score: 91.6633 bits (226), Expect = 1.387e-75
Identity = 41/62 (66.13%), Postives = 50/62 (80.65%), Query Frame = 2

Query:  146 GELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 331
            G+L  IISR  F+D+L +RND  CPARGFYTYDAFI AA++FPGFG +G+   RK+EIAAFF
Sbjct:   69 GDLSGIISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFF 130

[Close]

BLAST of CX043387 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 1.809e-75
Identity = 98/165 (59.39%), Postives = 119/165 (72.12%), Query Frame = 3

Query:  309 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFF 803
            K ++  F  QT HETTGGW  AP G YAWGYC++R+ +P++              QYYGRGPIQ++WN NY +CG A+GVDLLN PDL+ATD V+SFKSA+WFWMTAQ PKPS H+VI   W PS+ DV A RLPGYG  TNIINGG+ECG   +  V++RIGFF
Sbjct:  128 KREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPSTYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFF 292

HSP 2 Score: 87.0409 bits (214), Expect = 1.809e-75
Identity = 42/79 (53.16%), Postives = 53/79 (67.09%), Query Frame = 2

Query:   92 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAF 328
            CG G  C  +  G      +L  +ISR  F+ +L +RND  CPA+GFYTYDAFI AA+A+P FGN+G+   RKREIAAF
Sbjct:   58 CGPG--CQSQCGGPSPAPTDLSALISRSTFDQMLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAF 134

[Close]

BLAST of CX043387 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 5.234e-75
Identity = 98/165 (59.39%), Postives = 119/165 (72.12%), Query Frame = 3

Query:  309 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFF 803
            K ++  F  QT HETTGGW  AP G YAWGYC++R+ +P++              QYYGRGPIQ++WN NY +CG A+GVDLLN PDL+ATD V+SFKSA+WFWMTAQ PKPS H+VI   W PS+ DV A RLPGYG  TNIINGG+ECG   +  V++RIGFF
Sbjct:  127 KREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPSAYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFF 291

HSP 2 Score: 85.5001 bits (210), Expect = 5.234e-75
Identity = 43/84 (51.19%), Postives = 54/84 (64.29%), Query Frame = 2

Query:   92 CGS-----GVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAF 328
            CGS     G  C  +  G      +L  +ISR  F+ +L +RND  CPA+GFYTYDAFI AA+A+P FGN+G+   RKREIAAF
Sbjct:   50 CGSTTDYCGKDCQSQCGGPSPAPTDLSALISRSTFDQVLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAF 133

[Close]

BLAST of CX043387 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 2.577e-74
Identity = 96/166 (57.83%), Postives = 118/166 (71.08%), Query Frame = 3

Query:  309 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIR-QVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFF 803
            K ++  F AQT HETTGGW  AP G YAWGYCY+R Q SP +              +YYGRGPIQ+++N NY + G+A+GVDL+NNPDL+ATD V+SFK+A WFWMT Q PKPSCH VI   W PS  D +AGRLPG+G+ TNIINGG+ECG      V++RIGF+
Sbjct:  117 KREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGAYCVPSAQWPCAAGRKYYGRGPIQISYNYNYGQAGKAIGVDLVNNPDLVATDAVISFKTAFWFWMTPQSPKPSCHNVITGGWTPSGADRSAGRLPGFGVITNIINGGVECGKGVVPQVQDRIGFY 282

HSP 2 Score: 93.9745 bits (232), Expect = 2.577e-74
Identity = 43/80 (53.75%), Postives = 57/80 (71.25%), Query Frame = 2

Query:   92 CGSGV-VCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAF 328
            CG+    CG       +  G++G++I+R MF D+L +RN+  CP +GFYTYDAFI AA+AFPGFG +G+ T RKREIAAF
Sbjct:   44 CGNTADYCGSGCQSQCSSTGDIGQLITRSMFNDMLKHRNEGSCPGKGFYTYDAFIAAAKAFPGFGTTGDTTTRKREIAAF 123

[Close]

BLAST of CX043387 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 3.362e-74
Identity = 100/166 (60.24%), Postives = 121/166 (72.89%), Query Frame = 3

Query:  309 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFF 803
            K ++  FFAQT HETTGGW  AP G YAWGYC++R+                 PG+ Y+GRGPIQ++ N NY  CG A+GVDLLNNPDL+ATDPV+SFKSAIWFWMT Q PKPSCH+VII  W+PSA D  A RLPG+G+ TNIINGG+ECG   +  V++RIGF+
Sbjct:  131 KREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVIIGRWQPSAADRAANRLPGFGVITNIINGGLECGRGSDSRVQDRIGFY 296

HSP 2 Score: 81.6481 bits (200), Expect = 3.362e-74
Identity = 40/81 (49.38%), Postives = 53/81 (65.43%), Query Frame = 2

Query:   92 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARG-FYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 331
            C SG        G G  GG++G +IS  MF+ +L +RND  C  +  FY+Y+AFI AA++F GFG +G+ T RKREIAAFF
Sbjct:   58 CPSGPSPKPPTPGPGPSGGDIGSVISNSMFDQMLKHRNDNACQGKNNFYSYNAFINAARSFGGFGTTGDTTARKREIAAFF 138

[Close]

BLAST of CX043387 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 4.382e-74
Identity = 98/165 (59.39%), Postives = 121/165 (73.33%), Query Frame = 3

Query:  309 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFF 803
            K ++  F  QT HETTGGW  AP G YAWGYC++R+ +P++              QYYGRGPIQ++WN NY +CG A+GVDLLNNPDL+ATDPV+SFK+A+WFWMT Q PKPSCH+VI   W PS+ D  AGRLPGYG  TNIINGG+ECG   +  V++RIGF+
Sbjct:  120 KREIAAFLGQTSHETTGGWPTAPDGPYAWGYCFLREQNPSTYCQASSEFPCASGKQYYGRGPIQISWNYNYGQCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVITGGWTPSSADRAAGRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFY 284

HSP 2 Score: 78.1814 bits (191), Expect = 4.382e-74
Identity = 38/83 (45.78%), Postives = 54/83 (65.06%), Query Frame = 2

Query:   80 SAQNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAF 328
            +++ CG G  C  + +G  + GG L  +IS + F ++L +RND  C  + FYTYDAF+ AA+AFP F N G+   +KREIAAF
Sbjct:   47 TSEYCGDG--CQSQCSG-SSGGGTLSSLISGDTFNNMLKHRNDNACQGKPFYTYDAFLSAAKAFPNFANKGDTATKKREIAAF 126

[Close]

BLAST of CX043387 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 7.452e-74
Identity = 93/166 (56.02%), Postives = 121/166 (72.89%), Query Frame = 3

Query:  309 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFF 803
            K ++  F  QT HETTGGW  AP G Y+WGYC+  ++   +S           P + Y+GRGPIQL++N NY   GEA+G DLLNNP+L+A+DPV+SFK+A+WFWMT Q PKPSCH+VI  +W PS+ D+ AGR+PGYG+ TNIINGG+ECG+  +D V NRIGF+
Sbjct:  138 KREVAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATASYCVPSAEWPCAPDKKYFGRGPIQLSYNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQWTPSSGDIAAGRVPGYGVITNIINGGLECGFGPDDRVANRIGFY 303

HSP 2 Score: 87.4261 bits (215), Expect = 7.452e-74
Identity = 42/78 (53.85%), Postives = 53/78 (67.95%), Query Frame = 2

Query:   95 GSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAF 328
            G G   G    G G  GG +  ++S+E+FE LL +RNDA CPARGFYTYDA + AA AFP F  +G++  RKRE+AAF
Sbjct:   67 GGGGGGGGGGGGGGGGGGAVEAVVSKELFEQLLLHRNDAACPARGFYTYDALVTAAAAFPDFAATGDDEARKREVAAF 144

The following BLAST results are available for this feature:

BLAST of CX043387 vs. ExPASy Swiss-Prot

BLAST of CX043387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56


Match Name	E-value	Identity	Description
CHI1_TOBAC	2.818e-76	59.64	Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1...	[more]
CHIB_ARATH	3.675e-76	59.64	Basic endochitinase B OS=Arabidopsis thaliana GN=C...	[more]
CHI2_TOBAC	6.252e-76	59.04	Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1...	[more]
CHI2_BRANA	1.387e-75	56.63	Endochitinase CH25 OS=Brassica napus PE=2 SV=1	[more]
CHIT_PHAVU	1.809e-75	59.39	Endochitinase OS=Phaseolus vulgaris PE=1 SV=1	[more]
CHI5_PHAVU	5.234e-75	59.39	Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1	[more]
CHIB_VITVI	2.577e-74	57.83	Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE...	[more]
CHI4_SOLTU	3.362e-74	60.24	Endochitinase 4 (Fragment) OS=Solanum tuberosum GN...	[more]
CHI2_PEA	4.382e-74	59.39	Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=...	[more]
CHI9_ORYSJ	7.452e-74	56.02	Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht...	[more]

Pages

Properties


Property Name	Value
Genbank description	UCRCS07_10G02_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10G02-N4-1-6.g, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CX043387 ID=CX043387; Name=CX043387; organism=Citrus sinensis; type=EST; length=808bp
CATAACTCTTGCTTTCAAAATGAGGCTCATTGGGTCCTTACTAATTTTCT
CTCTAGTTTTATCTTTTGTACTAGGAGGTTCAGCACAGAATTGTGGAAGC
GGCGTTGTGTGCGGTGAACGTGATACTGGCCACGGGACGGATGGCGGTGA
ACTGGGCAAGATCATCTCAAGGGAGATGTTTGAAGACTTGCTTCCGTATA
GAAATGATGCCCGATGCCCTGCCAGAGGCTTCTACACTTATGATGCTTTT
ATAGAGGCAGCCCAAGCTTTTCCAGGCTTTGGTAACTCTGGAAATGAAAC
CATGCGTAAAAGAGAAATTGCTGCCTTTTTTTGCCCAAACTGGCCATGAA
ACTACTGGGGGATGGACCGATGCACCTGGTGGAGAATATGCTTGGGGATA
TTGCTATATTAGGCAAGTTAGCCCTGCGTCGTCCGACTACTGTTATCCTT
ACTGTCCATGTCCCTTGCCAGGGCAATACTATGGCCGAGGTCCAATTCAA
CTCACTTGGAATTGCAATTACTTAAGGTGCGGAGAAGCCTTGGGGGTGGA
CTTGTTGAACAATCCAGACCTACTTGCCACTGATCCAGTACTATCATTCA
AGTCAGCAATCTGGTTCTGGATGACTGCACAGCCACCAAAGCCATCGTGC
CACGAAGTCATTATCGACGAATGGAAACCATCAGCAAATGACGTAAACGC
CGGCCGGCTTCCGGGATACGGTCTAACCACAAATATAATCAACGGTGGAA
TTGAATGTGGCTACGTTGGGAATGACGCTGTACGTAACCGTATTGGGTTC
TTTACCAC