CX043294

Overview
NameCX043294
Unique NameCX043294
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length728
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11791 contig Csv1_Contig11791:5..732. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043294 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1)

HSP 1 Score: 367.081 bits (941), Expect = 5.478e-101
Identity = 168/217 (77.42%), Postives = 188/217 (86.64%), Query Frame = 1
Query:   79 GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG-SIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPKWSFGQTYTGRQ 726
            G WINAHATFY              YGNLYSQGYG  TAALSTALF+ GLSCGACF++MC NDPQWC++G SI+VTATNFCPPGG CDPPNHHFDLSQP+++ IA Y++GI+PV+YRRVRCKR+GGIRFTINGHSYFNLVL+TNVGGAGDV +VS+KGSRT+WQ MSRNWGQNWQSNSYLNGQSLSFVVTTS+  SVVS+NVAPP WSFGQTYTG Q
Sbjct:   36 GPWINAHATFYGGGDASGTMGGACGYGNLYSQGYGLETAALSTALFDQGLSCGACFELMCVNDPQWCIKGRSIVVTATNFCPPGGACDPPNHHFDLSQPIYEKIALYKSGIIPVMYRRVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSMKGSRTKWQLMSRNWGQNWQSNSYLNGQSLSFVVTTSDRRSVVSFNVAPPTWSFGQTYTGGQ 252          
BLAST of CX043294 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 363.229 bits (931), Expect = 7.910e-100
Identity = 174/247 (70.45%), Postives = 193/247 (78.14%), Query Frame = 1
Query:   13 KMALWVILCVGFLSLVSSVQGY-GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPKWSFGQTYTGRQ 726
            KM L  I    F ++V SV GY  GW+NAHATFY              YGNLYSQGYGTNTAALSTALFNNGLSCGACF+I C +D  WCL G+IIVTATNFCPP        GGWC+PP HHFDLSQPVFQ IAQY+AG+VPV YRRV C R GGIRFTINGHSYFNLVL+TNVGGAGDV +V++KGSRTRWQ MSRNWGQNWQSN+ LNGQ+LSF VT S+G +VVS N+AP  WSFGQT+TGRQ
Sbjct:    5 KMGLLGIALFCFAAMVCSVHGYDAGWVNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCQSDGAWCLPGAIIVTATNFCPPNNALPNNAGGWCNPPLHHFDLSQPVFQRIAQYKAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRWQQMSRNWGQNWQSNNLLNGQALSFKVTASDGRTVVSNNIAPASWSFGQTFTGRQ 251          
BLAST of CX043294 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1)

HSP 1 Score: 360.147 bits (923), Expect = 6.696e-99
Identity = 177/248 (71.37%), Postives = 191/248 (77.02%), Query Frame = 1
Query:   16 MALWVILCVGFL-SLVSSVQGY--GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPKWSFGQTYTGRQ 726
            MAL   L +  L ++ S V GY  GGW+NAHATFY              YGNLYSQGYGTNTAALSTALFNNGLSCGACF+I C ND +WCL GSI+VTATNFCPP        GGWC+PP  HFDLSQPVFQ IAQYRAGIVPV YRRV C R GGIRFTINGHSYFNLVLITNVGGAGDV +  +KGSRT WQ MSRNWGQNWQSNSYLNGQSLSF VTTS+G ++VS NVA   WSFGQT+TG Q
Sbjct:    1 MALVTFLFIATLGAMTSHVNGYAGGGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRCQNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQYRAGIVPVAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAMVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGQTIVSNNVANAGWSFGQTFTGAQ 248          
BLAST of CX043294 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1)

HSP 1 Score: 357.836 bits (917), Expect = 3.323e-98
Identity = 173/242 (71.49%), Postives = 193/242 (79.75%), Query Frame = 1
Query:   28 VILCVGFLSLVSSVQGYGG-WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPKWSFGQTYTGRQ 726
            V++ VG ++  SSV GYGG WINAHATFY              YGNLYSQGYGT+TAALSTALFNNGLSCG+CF+I C ND +WCL GSI+VTATNFCPP        GGWC+PP  HFDL+QPVFQ IAQYRAGIVPV YRRV C+R GGIRFTINGHSYFNLVLITNVGGAGDV + +IKGSRT WQ MSRNWGQNWQSNSYLNGQ+LSF VTTS+G +VVS+N AP  WS+GQT+ G Q
Sbjct:    8 VMIMVGVMA--SSVSGYGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTVWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGWSYGQTFAGGQ 247          
BLAST of CX043294 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1)

HSP 1 Score: 340.502 bits (872), Expect = 5.491e-93
Identity = 160/242 (66.12%), Postives = 184/242 (76.03%), Query Frame = 1
Query:   28 VILCVGFLSLVSSVQGYG-GWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPKWSFGQTYTGRQ 726
            + L +  + +  SV GY  GW+NA ATFY              YGNLYSQGYGTNTAALSTALFN G SCGACFQI C +DP+WC+ G+I VT TNFCPP        GGWC+PP HHFDL+QP+F  IAQY+AG+VPV YRRV C+R GGIRFTINGHSYFNLVLITNV GAGDV +VSIKG+ TRWQ MSRNWGQNWQSN+ L+GQ+LSF VTTS+G +V+S N  P  WSFGQTYTG+Q
Sbjct:    9 ISLSLMMMIMWKSVDGYSSGWVNARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIKCVDDPKWCIGGTITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAGVVPVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNWGQNWQSNAKLDGQALSFKVTTSDGRTVISNNATPRNWSFGQTYTGKQ 250          
BLAST of CX043294 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 331.643 bits (849), Expect = 2.551e-90
Identity = 157/245 (64.08%), Postives = 185/245 (75.51%), Query Frame = 1
Query:   16 MALWVILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPKWSFGQTYTGRQ 726
            MA+  +L + FL+  +S  GYGGW +AHATFY              YGNLYSQGYGTNTAALSTALFN+G +CG+C+++ C N    CL GSI VTATNFCPP        GGWC+PP  HFD+++P F HIAQYRAGIVPV +RRV C + GG+RFT+NGHSYFNLVL+TNV GAGDVR+VSIKGSRT WQPMSRNWGQNWQSN++L+GQSLSF VT S+G +V S NVA P W FGQT+ G Q
Sbjct:    1 MAIAGVLFLLFLARQASAAGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTFEGGQ 245          
BLAST of CX043294 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 331.643 bits (849), Expect = 2.551e-90
Identity = 157/245 (64.08%), Postives = 185/245 (75.51%), Query Frame = 1
Query:   16 MALWVILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPKWSFGQTYTGRQ 726
            MA+  +L + FL+  +S  GYGGW +AHATFY              YGNLYSQGYGTNTAALSTALFN+G +CG+C+++ C N    CL GSI VTATNFCPP        GGWC+PP  HFD+++P F HIAQYRAGIVPV +RRV C + GG+RFT+NGHSYFNLVL+TNV GAGDVR+VSIKGSRT WQPMSRNWGQNWQSN++L+GQSLSF VT S+G +V S NVA P W FGQT+ G Q
Sbjct:    1 MAIAGVLFLLFLARQASAAGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTFEGGQ 245          
BLAST of CX043294 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 323.939 bits (829), Expect = 5.318e-88
Identity = 156/242 (64.46%), Postives = 179/242 (73.97%), Query Frame = 1
Query:   28 VILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTR-WQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPKWSFGQTYTGRQ 726
            +I  +  L L  +    GGW   HATFY              YGNLY QGYGTNTAALSTALFNNGL+CGAC+++ C +DP+WCL  +I VTATNFCPP        GGWC+PP  HFDL++P F  IAQYRAGIVPV +RRV C + GGIRFTINGHSYFNLVLI+NVGGAGDV AVSIKGS+T+ WQ MSRNWGQNWQSNSY+N QSLSF VTTS+G ++VS +VAP  W FGQTY G Q
Sbjct:   11 IISIISVLFLQGTHGDDGGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTAALSTALFNNGLTCGACYEMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQAMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNWQFGQTYQGGQ 252          
BLAST of CX043294 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1)

HSP 1 Score: 314.309 bits (804), Expect = 4.214e-85
Identity = 150/246 (60.98%), Postives = 176/246 (71.54%), Query Frame = 1
Query:   16 MALWVILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG--SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPKWSFGQTYTGR 723
            MA+ V+      + +  V   G WINAHATFY              YGNLYSQGYG NTAALSTALFNNGLSCG+CF++ C NDP WCL G  SI++TATNFCPP        GGWC+PP  HFDL+ P+F  IA+Y+AGIVPV YRR+ C++ GGIRFTING  YFNLVL+TNV GAGDV  VS+KGS T+W  +SRNWGQNWQSN+ L GQSLSF V TS+G S  S N+AP  W FGQTY+G+
Sbjct:    9 MAVMVVTAFTANAKIPGVYTGGPWINAHATFYGEADASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASDNGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSVKGSNTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGRSSTSNNIAPSNWQFGQTYSGK 254          
BLAST of CX043294 vs. ExPASy Swiss-Prot
Match: EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 314.309 bits (804), Expect = 4.214e-85
Identity = 147/225 (65.33%), Postives = 172/225 (76.44%), Query Frame = 1
Query:   79 GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRT-RWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPKWSFGQTYTGRQ 726
            GGW   HATFY              YGNL+SQGYG  TAALSTALFN+G  CGACF++ C +DP+WC+ GSIIV+ATNFCPP        GGWC+PP  HFDL++P F  IAQYRAGIVPV +RRV C++ GGIRFTING+ YF+LVLITNVGGAGD+RAVS+KGS+T +WQ MSRNWGQNWQSN+YL GQSLSF VT S+G +VVSY+V P  W FGQT+ G Q
Sbjct:   30 GGWERGHATFYGGADASGTMGGACGYGNLHSQGYGLQTAALSTALFNSGQKCGACFELQCEDDPEWCIPGSIIVSATNFCPPNFALANDNGGWCNPPLKHFDLAEPAFLQIAQYRAGIVPVAFRRVPCEKGGGIRFTINGNPYFDLVLITNVGGAGDIRAVSLKGSKTDQWQSMSRNWGQNWQSNTYLRGQSLSFQVTDSDGRTVVSYDVVPHDWQFGQTFEGGQ 254          
The following BLAST results are available for this feature:
BLAST of CX043294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
EXPA5_ARATH5.478e-10177.42Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 ... [more]
EXP15_ARATH7.910e-10070.45Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=... [more]
EXPA1_ARATH6.696e-9971.37Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 ... [more]
EXP10_ARATH3.323e-9871.49Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=... [more]
EXP14_ARATH5.491e-9366.12Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=... [more]
EXPA4_ORYSJ2.551e-9064.08Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA4_ORYSI2.551e-9064.08Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4... [more]
EXPA8_ARATH5.318e-8864.46Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 ... [more]
EXPA9_ARATH4.214e-8560.98Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 ... [more]
EXPA2_ARATH4.214e-8565.33Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10B05_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10B05-D10-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043294 ID=CX043294; Name=CX043294; organism=Citrus sinensis; type=EST; length=728bp
TCAAAGGAAAAAAAAATGGCTCTTTGGGTGATTCTTTGTGTTGGGTTTCT
CTCATTGGTCTCATCCGTTCAAGGTTATGGAGGTTGGATTAATGCTCATG
CAACTTTCTATGGAGGTGGTGATGCTTCTGGCACAATGGGGGGCGCTTGT
GGGTACGGCAATTTGTACAGCCAAGGTTATGGTACTAATACCGCAGCACT
TAGCACTGCTTTGTTCAACAATGGCCTAAGTTGTGGAGCTTGCTTTCAAA
TTATGTGCGCTAATGACCCGCAATGGTGCCTGCGTGGCTCCATCATTGTC
ACTGCCACTAACTTTTGCCCTCCTGGAGGCTGGTGTGATCCTCCTAACCA
CCACTTTGATCTCTCTCAGCCTGTCTTCCAACACATTGCCCAGTATAGAG
CTGGTATTGTTCCTGTAATCTACAGAAGGGTGAGATGCAAGAGAAATGGG
GGCATAAGGTTCACAATCAATGGCCATTCTTACTTCAATTTAGTTCTAAT
AACAAACGTGGGTGGAGCTGGTGACGTGCGTGCTGTATCCATCAAAGGTT
CAAGGACTAGATGGCAACCGATGTCGAGAAACTGGGGCCAAAACTGGCAA
AGCAACTCGTATCTTAATGGACAAAGCCTCTCTTTTGTTGTGACCACAAG
TAATGGCCACAGTGTTGTTTCTTACAATGTTGCCCCTCCTAAGTGGTCAT
TTGGGCAGACTTATACCGGCAGACAATT
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