CN186137
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186137 vs. ExPASy Swiss-Prot
Match: HMGL_SOYBN (HMG1/2-like protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.143e-22 Identity = 55/101 (54.46%), Postives = 65/101 (64.36%), Query Frame = -1 Query: 364 AAGKRKAVLKASKSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDXXXXXXXXXXXXXKLDYEKLMTAYN 666 A K+ A KA K + K A KDPNKPKRPPSAFFVF+EEFRKV+ +EHP KAVSAVGKA G KWK+++D K++YEK M AYN Sbjct: 18 AVNKKGAATKARKPAGKG-----KAAKDPNKPKRPPSAFFVFMEEFRKVFNKEHPENKAVSAVGKAAGAKWKTMSDAEKAPYVAKSEKRKVEYEKNMRAYN 113
BLAST of CN186137 vs. ExPASy Swiss-Prot
Match: HMGL_IPONI (HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.143e-22 Identity = 53/108 (49.07%), Postives = 68/108 (62.96%), Query Frame = -1 Query: 364 VKPVEDRAAGKRKAVLKASKSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDXXXXXXXXXXXXXKLDYEKLMTAYN 687 +K + +A K +K + K+TK A KDPNKPKRPPSAFFVF+E+FRK YK++HPN K+V+ VGKAGG+KWK LT K +YEK + AYN Sbjct: 1 MKGGKSKAKSDNKLAVKKQAADTKKTKK---AVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTAAEKAPFISKAEKRKQEYEKNLQAYN 105
BLAST of CN186137 vs. ExPASy Swiss-Prot
Match: MNB1B_MAIZE (DNA-binding protein MNB1B OS=Zea mays GN=MNB1B PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.452e-19 Identity = 52/110 (47.27%), Postives = 69/110 (62.73%), Query Frame = -1 Query: 364 VKPVEDRAAGKRKAVLKA-SKSSNKRTKNVKS-AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDXXXXXXXXXXXXXKLDYEKLMTAYN 687 +K + + A K A L SK + K K K A KDPNKPKR PSAFFVF+EEFRK +K+++P K+V+AVGKA G++WKSL++ KL+Y K + AYN Sbjct: 1 MKGAKSKGAAKADAKLAVKSKGAEKPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYN 110
BLAST of CN186137 vs. ExPASy Swiss-Prot
Match: HMGL_VICFA (HMG1/2-like protein OS=Vicia faba PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.877e-18 Identity = 50/106 (47.17%), Postives = 66/106 (62.26%), Query Frame = -1 Query: 364 EDRAAGKRKAVLKASKSSNKRTKNVKSAK--KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDXXXXXXXXXXXXXKLDYEKLMTAYN 675 E + A + AV K ++ K K K KDPNKPKRPPSAFFVF+ +FR+ YK++HPN K+V+AVGKA GE+WKSL++ K +YE + AYN Sbjct: 9 ESKKAETKLAVNKKGAAATKGGKKPAKGKEPKDPNKPKRPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRALKKKEEYEITLQAYN 114
BLAST of CN186137 vs. ExPASy Swiss-Prot
Match: HMGL_WHEAT (HMG1/2-like protein OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.039e-17 Identity = 50/111 (45.05%), Postives = 66/111 (59.46%), Query Frame = -1 Query: 364 VKPVEDRAAGKRKAVLKA-SKSSNKRTKNVKSAK--KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDXXXXXXXXXXXXXKLDYEKLMTAYN 687 +K + + A K A L SK + K K K KDPNKPKR PSAFFVF+ EFR+ +KQ++P K+V+AVGKA GE+WKSL++ K +Y K + AYN Sbjct: 1 MKGAKSKGAAKADAKLAVKSKGAEKPAAKGKKGKAGKDPNKPKRAPSAFFVFMGEFREEFKQKNPKNKSVAAVGKAAGERWKSLSESEKAPYVAKANKLKGEYNKAIAAYN 111 The following BLAST results are available for this feature:
BLAST of CN186137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186137 ID=CN186137; Name=CN186137; organism=Citrus sinensis; type=EST; length=699bpback to top |