DC900178
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900178 vs. ExPASy Swiss-Prot
Match: OLEO1_SOYBN (P24 oleosin isoform A OS=Glycine max PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 3.002e-12 Identity = 31/47 (65.96%), Postives = 41/47 (87.23%), Query Frame = 2 Query: 245 FIICSPVLVPAALVTGLAIAGFLTSGAFGITALSSFSWMASFLRRTR 385 F++ SPVLVPA + GLA+AGFLTSGAFG+TALSSFSW+ +++R T+ Sbjct: 91 FVLFSPVLVPATVAIGLAVAGFLTSGAFGLTALSSFSWILNYIRETQ 137
BLAST of DC900178 vs. ExPASy Swiss-Prot
Match: OLEO2_SOYBN (P24 oleosin isoform B OS=Glycine max PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.121e-12 Identity = 31/47 (65.96%), Postives = 40/47 (85.11%), Query Frame = 2 Query: 245 FIICSPVLVPAALVTGLAIAGFLTSGAFGITALSSFSWMASFLRRTR 385 FII SPVL+PA + GLA+AGFLTSG FG+TALSSFSW+ +++R T+ Sbjct: 90 FIIFSPVLIPATVAIGLAVAGFLTSGVFGLTALSSFSWILNYIRETQ 136
BLAST of DC900178 vs. ExPASy Swiss-Prot
Match: OLEO2_ORYSJ (Oleosin 18 kDa OS=Oryza sativa subsp. japonica GN=OLE18 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.541e-11 Identity = 44/116 (37.93%), Postives = 59/116 (50.86%), Query Frame = 2 Query: 92 DAIKGMLPERTPSKSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIICSPVLVPAALVTGLAIAGFLTSGAFGITALSSFSWMASFLRRT--RAPG---QAKRRVLGTA 424 + +KG+LPE+ PS SQ F+I SPVLVPAAL+ GLA+AGFLTSGA G+ LSS +++A+ R+ R P QA+RR+ A Sbjct: 20 ETVKGILPEKAPSASQALTVATLFPLGGLLLVLSGLALAASVVGLAVATPVFLIFSPVLVPAALLIGLAVAGFLTSGALGLGGLSSLTFLANTARQAFQRTPDYVEQARRRMAEAA 135
BLAST of DC900178 vs. ExPASy Swiss-Prot
Match: OLEO2_ORYSI (Oleosin 18 kDa OS=Oryza sativa subsp. indica GN=OLE18 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.541e-11 Identity = 44/116 (37.93%), Postives = 59/116 (50.86%), Query Frame = 2 Query: 92 DAIKGMLPERTPSKSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIICSPVLVPAALVTGLAIAGFLTSGAFGITALSSFSWMASFLRRT--RAPG---QAKRRVLGTA 424 + +KG+LPE+ PS SQ F+I SPVLVPAAL+ GLA+AGFLTSGA G+ LSS +++A+ R+ R P QA+RR+ A Sbjct: 20 ETVKGILPEKAPSASQALTVATLFPLGGLLLVLSGLALAASVVGLAVATPVFLIFSPVLVPAALLIGLAVAGFLTSGALGLGGLSSLTFLANTARQAFQRTPDYVEQARRRMAEAA 135
BLAST of DC900178 vs. ExPASy Swiss-Prot
Match: OLEO2_ARATH (Oleosin 21.2 kDa OS=Arabidopsis thaliana GN=At5g40420 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.541e-11 Identity = 43/114 (37.72%), Postives = 54/114 (47.37%), Query Frame = 2 Query: 101 KGMLPERTPSKSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIICSPVLVPAALVTGLAIAGFLTSGAFGITALSSFSWMASFLRRTR--APGQ---AKRRVLGTAG 427 K M+PE PS +Q F++ SPV+VPAAL GLA+ GFL SG FG+T LSS SW+ ++LR TR P Q AKRR+ G Sbjct: 41 KSMMPESGPSSTQVLSLLIGVPVVGSLLALAGLLLAGSVIGLMVALPLFLLFSPVIVPAALTIGLAMTGFLASGMFGLTGLSSISWVMNYLRGTRRTVPEQLEYAKRRMADAVG 154 The following BLAST results are available for this feature:
BLAST of DC900178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900178 ID=DC900178; Name=DC900178; organism=Citrus sinensis; type=EST; length=460bpback to top |