CN186116
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186116 vs. ExPASy Swiss-Prot
Match: PAO_ARATH (Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana GN=PAO PE=1 SV=1) HSP 1 Score: 385.571 bits (989), Expect = 1.829e-106 Identity = 191/272 (70.22%), Postives = 208/272 (76.47%), Query Frame = 2 Query: 14 IFTSPRKTLPFFPLRTPKRQITVKSLP*RSKNL-SPLRVXXXXXXXXXXXEETVRKDEKEDYGSLVDDEYG--KESSDSKFSWRDHWYPVSLVEDLDPNLPTAFQLLGRDLVLWFDNNSNKWVAFDDKCPHRLAPLSEGRIDENGHLQCSYHGWSFDGCGSCTRIPQAASEGPEARAIQSPRACATRFPTMVSQGLLFVWPDEYGQERANATKPPMLPDAFDKPEFSSVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFK 820 I S K +PF T K + V P RSK +PLRV E R +++EYG KE S+F WRDHWYPVSLVEDLDPN+PT FQLLGRDLVLWFD N KW AFDD CPHRLAPLSEGR+DENGHLQCSYHGWSF GCGSCTRIPQAA+ GPEARA++SPRACA +FPTMVSQGLLFVWPDE G +RAN+ +PP LPD FDKPEFS+VTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFK Sbjct: 13 ITKSQSKKIPFLS-PTTKFPLKVSISPSRSKLFHNPLRVAAPPSVPTSDSTEEKR----------IEEEYGGDKEEEGSEFKWRDHWYPVSLVEDLDPNVPTPFQLLGRDLVLWFDRNDQKWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSGPEARAVKSPRACAIKFPTMVSQGLLFVWPDENGWDRANSIEPPRLPDDFDKPEFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFK 273
BLAST of CN186116 vs. ExPASy Swiss-Prot
Match: CAO_DUNSA (Chlorophyllide a oxygenase, chloroplastic OS=Dunaliella salina GN=CAO PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.005e-20 Identity = 65/194 (33.51%), Postives = 86/194 (44.33%), Query Frame = 2 Query: 254 RDHWYPVSLVEDLDPNLPTAFQLLGRDLVLWFDNNSNKWVAFDDKCPHRLAPLSEGRIDENGHLQCSYHGWSFDGCGSCTRIPQAASEGPEARAIQSPRAC----ATRFPTMVSQGLLFVWPDEYGQERANATKPPMLPDAFDKPEFS---SVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLP 814 R+ WYP + L+P + F L G VL+ D +S D C HR PLS G++ NGH+QC YHGW FDG G+CT++P S R C P + G ++VWP + PP LP F P I D+ + LMEN+ D +H F H T R P+P Sbjct: 131 RNFWYPTEFAKKLEPGMMVPFDLFGVPWVLFRDEHSAP-TCIKDSCAHRACPLSLGKVI-NGHVQCPYHGWEFDGSGACTKMP-------------STRMCHGVGVAALPCVEKDGFVWVWPGD--------GPPPDLPPDFTAPPAGYDVHAEIMVDVPVEHGLLMENLLDLAHAPFTH---TTTFARGWPIP 298
BLAST of CN186116 vs. ExPASy Swiss-Prot
Match: CAO_CHLRE (Chlorophyllide a oxygenase, chloroplastic OS=Chlamydomonas reinhardtii GN=CAO PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.804e-14 Identity = 60/201 (29.85%), Postives = 85/201 (42.29%), Query Frame = 2 Query: 221 GKESS-DSKFSWRDHWYPVSLVEDLDPNLPTAFQLLGRDLVLWFDNNSNKWVAFDDKCPHRLAPLSEGRIDENGHLQCSYHGWSFDGCGSCTRIPQAASEGPEARAIQSPRACATRFPTMVSQGLLFVWPDEYGQERANATKPPMLPDAFDKPE--FSSVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLP 814 G ESS + + R+ WYP L + F+L G V++ D D+C HR PLS G++ E G + C YHGW F+G G+CT++P P R + P G ++VWP + LPD PE I D+ + L+EN+ D +H F H T R P+P Sbjct: 290 GLESSMEIEEGLRNFWYPAEFSARLPKDTLVPFELFGEPWVMFRDEKGQP-SCIRDECAHRGCPLSLGKVVE-GQVMCPYHGWEFNGDGACTKMPST----PFCRNVG-----VAALPCAEKDGFIWVWP-------GDGLPAETLPDFAQPPEGFLIHAEIMVDVPVEHGLLIENLLDLAHAPFTH---TSTFARGWPVP 469
BLAST of CN186116 vs. ExPASy Swiss-Prot
Match: CAO_ORYSJ (Chlorophyllide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica GN=CAO PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.701e-11 Identity = 49/189 (25.93%), Postives = 78/189 (41.27%), Query Frame = 2 Query: 248 SWRDHWYPVSLVEDLDPNLPTAFQLLGRDLVLWFDNNSNKWVAFDDK----------CPHRLAPLSEGRIDENGHLQCSYHGWSFDGCGSCTRIPQAASEGPEARAIQSPRACATRFPTMVSQGLLFVWPDEYGQERANATKPPMLPDAFDKPEFSSVTIQRDLF----YGYDTLMENVSDPSHIDFAH 772 S ++ WYPV+ DL D ++ D +WV F K C HR PL G ++E G +QC YHGW + G C ++P R++ P +G++++WP G + +T P +LP S TI ++ + L++N+ D +H F H Sbjct: 215 SLKNFWYPVAFSSDLKD-----------DTMVPIDCFEEQWVIFRGKDGRPGCVMNTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTKMLNVRIRSL----------PCFEQEGMVWIWP---GNDPPKSTIPSLLPP-------SGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTH 371 The following BLAST results are available for this feature:
BLAST of CN186116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186116 ID=CN186116; Name=CN186116; organism=Citrus sinensis; type=EST; length=822bpback to top |