CN186114
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186114 vs. ExPASy Swiss-Prot
Match: RGA4_SOLBU (Putative disease resistance protein RGA4 OS=Solanum bulbocastanum GN=RGA4 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.276e-16 Identity = 52/182 (28.57%), Postives = 97/182 (53.30%), Query Frame = 3 Query: 210 DAILSPILEQLTSMAVEEAKEQVRLVTGVGKEVKKLTSSLRVIEAVLHDAEKRQVKEETVRLWLDQLRCTCYDMEDVLGEWNTARLKLQIDGVPKKKGCSFFPTASCFACKPLVLRRDIALKIKEINETLDDIAKQKDMFGFVVNVTNERADQRVPSISSI-DESEIFGREKEKNELVDRLL 752 +A L +LE LTS +++ L+ G KE +KL+S I+AVL DA+++Q+K++ + WL +L Y+++D+LGE ++ + + F+ + R I ++KEI E LD I++++ F F+ +T +A + E +++GR+KE++E+V L+ Sbjct: 3 EAFLQVLLENLTSFI----GDKLVLIFGFEKECEKLSSVFSTIQAVLQDAQEKQLKDKAIENWLQKLNSAAYEVDDILGECKNEAIRFE------QSRLGFYHPGI------INFRHKIGRRMKEIMEKLDAISEERRKFHFLEKITERQAAAATRETGFVLTEPKVYGRDKEEDEIVKILI 168
BLAST of CN186114 vs. ExPASy Swiss-Prot
Match: RGA3_SOLBU (Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 9.151e-15 Identity = 58/193 (30.05%), Postives = 100/193 (51.81%), Query Frame = 3 Query: 210 DAILSPILEQLTSMAVEEAKEQVRLVTGVGKEVKKLTSSLRVIEAVLHDAEKRQVKEETVRLWLDQLRCTCYDMEDVLGEWNT--ARLKLQIDGVPKKKGCSFFPTASCFACKPLVLRRDIALKIKEINETLDDIAKQKDMFGFVVNVTNERADQRVPSISSIDESEIFGREKEKNELVDRLLCEGSKEKKGP 782 +A L +L+ LT E + LV G KE KKL+S +I+AVL DA+++Q+K + ++ WL +L Y+++D+L + T AR K + G + P F K + ++KE+ E LD IA+++ F + +A +R + E +++GREKE++E+V L+ S ++ P Sbjct: 3 EAFLQVLLDNLTFFIQGE----LGLVFGFEKEFKKLSSMFSMIQAVLEDAQEKQLKYKAIKNWLQKLNVAAYEVDDILDDCKTEAARFKQAVLG-------RYHPRTITFCYK-------VGKRMKEMMEKLDAIAEERRNFHLDERIIERQAARRQTGF-VLTEPKVYGREKEEDEIVKILINNVSYSEEVP 176
BLAST of CN186114 vs. ExPASy Swiss-Prot
Match: RGA1_SOLBU (Putative disease resistance protein RGA1 OS=Solanum bulbocastanum GN=RGA1 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.492e-12 Identity = 48/190 (25.26%), Postives = 96/190 (50.53%), Query Frame = 3 Query: 210 DAILSPILEQLTSMAVEEAKEQVRLVTGVGKEVKKLTSSLRVIEAVLHDAEKRQVKEETVRLWLDQLRCTCYDMEDVLGEWNTARLKLQIDGVPKKKGCSFFPTA-SCFACKPLVLRRDIALKIKEINETLDDIAKQKDMFGFVVNVTNERADQRVPSISSIDESEIFGREKEKNELVDRLLCEGSKEKK 776 +A + +L+ LTS K ++ L+ G E ++L+S I+AVL DA+++Q+ ++ + WL +L Y+++D+L E+ T K F + + K + R + ++ ++ + L+ IA+++ F + +A R S + E +++GR+KEK+E+V L+ S +K Sbjct: 3 EAFIQVVLDNLTSFL----KGELVLLFGFQDEFQRLSSMFSTIQAVLEDAQEKQLNDKPLENWLQKLNAATYEVDDILDEYKT-------------KATRFLQSEYGRYHPKVIPFRHKVGKRMDQVMKKLNAIAEERKKFHLQEKIIERQAATRETG-SVLTEPQVYGRDKEKDEIVKILINTASDAQK 174
BLAST of CN186114 vs. ExPASy Swiss-Prot
Match: RGA2_SOLBU (Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.615e-11 Identity = 45/181 (24.86%), Postives = 93/181 (51.38%), Query Frame = 3 Query: 210 DAILSPILEQLTSMAVEEAKEQVRLVTGVGKEVKKLTSSLRVIEAVLHDAEKRQVKEETVRLWLDQLRCTCYDMEDVLGEWNTARLKLQIDGVPKKKGCSFFPTASCFACKPLVLRRDIALKIKEINETLDDIAKQKDMFGFVVNVTNERADQRVPSISSIDESEIFGREKEKNELVDRLL 752 +A + +L+ LTS K ++ L+ G E ++L+S I+AVL DA+++Q+ + + WL +L Y+++D+L E+ T + + + + P K + R + ++ ++ + L IA+++ F + +A +R S + E +++GR+KEK+E+V L+ Sbjct: 3 EAFIQVLLDNLTSFL----KGELVLLFGFQDEFQRLSSMFSTIQAVLEDAQEKQLNNKPLENWLQKLNAATYEVDDILDEYKTKATRFS-----QSEYGRYHP-------KVIPFRHKVGKRMDQVMKKLKAIAEERKNFHLHEKIVERQAVRRETG-SVLTEPQVYGRDKEKDEIVKILI 166
BLAST of CN186114 vs. ExPASy Swiss-Prot
Match: R13L1_ARATH (Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.755e-11 Identity = 44/157 (28.03%), Postives = 84/157 (53.50%), Query Frame = 3 Query: 306 VKKLTSSLRVIEAVLHDAEKRQVKEETVRLWLDQLRCTCYDMEDVLGEWNTARLKLQIDGVPKKKGCSFFPTASCFACKPLV--LRRDIALKIKEINETLDDIAKQKDMFGFVVNVTNERADQRVPSISSIDESEIFGREKEKNELVDRLLCEGSKE 770 +++L+++L I AVL DAE++Q+ V W+++LR Y ED L + T L+L I G + + + +++++ L+ +A Q+++ G + +T QR+P+ S +DESE+FGR+ +K+E++ L+ E K+ Sbjct: 39 LERLSTALLTITAVLIDAEEKQITNPVVEKWVNELRDVVYHAEDALDDIATEALRLNI-GAESSSSNRLRQLRGRMSLGDFLDGNSEHLETRLEKVTIRLERLASQRNILG-LKELTAMIPKQRLPTTSLVDESEVFGRDDDKDEIMRFLIPENGKD 193 The following BLAST results are available for this feature:
BLAST of CN186114 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186114 ID=CN186114; Name=CN186114; organism=Citrus sinensis; type=EST; length=797bpback to top |