DC900165

Overview
NameDC900165
Unique NameDC900165
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length633
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1697 contig Csv1_Contig1697:39..671. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900165 vs. ExPASy Swiss-Prot
Match: BABL_ARATH (Basic blue protein OS=Arabidopsis thaliana GN=At2g02850 PE=1 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 8.209e-36
Identity = 71/129 (55.04%), Postives = 90/129 (69.77%), Query Frame = 1
Query:   49 MSQGRGSARCAT--IMAALLICLLLVYIEIVDATTYTVGDSGGWSFNMASWAKGKRFKAGDTLVFNYDPTLHNVVAVNRAGYRSCTAPGGAKVYSSGKDRIKLVRGQNFFICNSAGHCGSGMKIAINAM 429
            M++GRGSA  +   I+  + + +LL+  + V A TYTVGDSG W+FN   W KGK F+AGD LVFNY+P +HNVV V+   Y +C  P GAK Y+SGKDRI L +GQNFFICN   HC S MKIA+ A+
Sbjct:    1 MAKGRGSASWSARAIVTLMAVSVLLLQADYVQAATYTVGDSGIWTFNAVGWPKGKHFRAGDVLVFNYNPRMHNVVKVDSGSYNNCKTPTGAKPYTSGKDRITLSKGQNFFICNFPNHCESDMKIAVTAV 129          
BLAST of DC900165 vs. ExPASy Swiss-Prot
Match: BABL_CUCSA (Basic blue protein OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.504e-34
Identity = 61/94 (64.89%), Postives = 77/94 (81.91%), Query Frame = 1
Query:  148 YTVGDSGGWSFNMASWAKGKRFKAGDTLVFNYDPTLHNVVAVNRAGYRSCTAPGGAKVYSSGKDRIKLVRGQNFFICNSAGHCGSGMKIAINAM 429
            Y VG SGGW+FN  SW KGKRF+AGD L+FNY+P +HNVV VN+ G+ +C  P GAKVY+SG+D+IKL +GQ++FICN  GHC SGMKIA+NA+
Sbjct:    3 YVVGGSGGWTFNTESWPKGKRFRAGDILLFNYNPXMHNVVVVNQGGFSTCNTPAGAKVYTSGRDQIKLPKGQSYFICNFPGHCQSGMKIAVNAL 96          
BLAST of DC900165 vs. ExPASy Swiss-Prot
Match: BABL_LILLO (Chemocyanin OS=Lilium longiflorum PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.712e-33
Identity = 64/126 (50.79%), Postives = 87/126 (69.05%), Query Frame = 1
Query:   49 MSQGRGSARCATIMAALLICLLLVYIEIVDATTYTVGDSGGWSFNMASWAKGKRFKAGDTLVFNYDPTLHNVVAVNRAGYRSCTAPGGAKVYSSGKDRIKLVRGQNFFICNSAGHCGSGMKIAINA 426
            M+QG GSA  A ++  +L+  L+   E+ ++  YTVGD GGW+F  + W  GK F+AGD LVF Y+P +HNVV+V   GY+SCTA  G++V+ SG DRI L RG N+FIC+  GHC  G+KIA+ A
Sbjct:    1 MAQGSGSAERALVLGVVLV-FLVFNCEVAESVVYTVGDGGGWTFGTSGWPAGKTFRAGDVLVFKYNPAVHNVVSVPAGGYKSCTASPGSRVFKSGDDRITLSRGTNYFICSVPGHCQGGLKIAVTA 125          
BLAST of DC900165 vs. ExPASy Swiss-Prot
Match: BCP_PEA (Blue copper protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.456e-16
Identity = 47/115 (40.87%), Postives = 65/115 (56.52%), Query Frame = 1
Query:   94 ALLICLLLVYIEIVD---ATTYTVGDSGGWSF--NMASWAKGKRFKAGDTLVFNYDPTLHNVVAVNRAGYRSCTAPGGAKVYSSGKDRIKLVR-GQNFFICNSAGHCGSGMKIAI 420
            AL++C LL  I +     AT YTVGD+ GW    + ++WA  K F  GD+LVFNY    H V  V  + Y+SCT+       S+G   I L + G+++FIC   GH   GMK++I
Sbjct:    6 ALVLCFLLAIINMALPSLATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAHTVDEVKESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSI 120          
BLAST of DC900165 vs. ExPASy Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.235e-16
Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = 1
Query:  139 ATTYTVGDSGGWS----FNMASWAKGKRFKAGDTLVFNYDPTLHNVVAVNRAGYRSCTAPGGAKVYSSGKDRIKLVR-GQNFFICNSAGHCGSGMKIAI 420
            AT + VGDS GW+    ++ A WA   +F  GD+L+FNY+   HNV+ V++  ++SC +   A  Y+SG D I L R G  +F+C   GHC  G K+ I
Sbjct:    1 ATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEI 99          
BLAST of DC900165 vs. ExPASy Swiss-Prot
Match: STEL_RHUVE (Stellacyanin OS=Rhus vernicifera PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.043e-14
Identity = 42/102 (41.18%), Postives = 50/102 (49.02%), Query Frame = 1
Query:  142 TTYTVGDSGGWSFNMAS-------WAKGKRFKAGDTLVFNYDPTLHNVVAVNRAGYRSCTAPGGAKVYSSGKDRIKL-VRGQNFFICNSAGHCGSGMKIAIN 423
            T YTVGDS GW             WA  K F  GD LVF YD   HNV  V +  Y+SC        Y++G +RI L   GQ ++IC    HC  G K+ IN
Sbjct:    1 TVYTVGDSAGWKVPFFGDVDYDWKWASNKTFHIGDVLVFKYDRRFHNVDKVTQKNYQSCNDTTPIASYNTGBBRINLKTVGQKYYICGVPKHCDLGQKVHIN 102          
BLAST of DC900165 vs. ExPASy Swiss-Prot
Match: BCB2_ARATH (Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.506e-13
Identity = 44/118 (37.29%), Postives = 65/118 (55.08%), Query Frame = 1
Query:   85 IMAALLICLLLVYIEIVDATTYTVGDSGGWSFNMASWAKGKRFKAGDTLVFNYDPTLHNVVAVNRAGYRSCTAPGGAKVYSSGKDRIKL-VRGQNFFICNSAGHC--GSGMKIAINAM 429
            + AA  + L+L  +    A TYT+  + G  ++   WA GK F+ GD L F Y  + H V  V++AGY  C A    + +S G  +I L   G N+FIC++ GHC    GMK+A+N +
Sbjct:   11 VAAATALLLVLTIVPGAVAVTYTIEWTTGVDYS--GWATGKTFRVGDILEFKYGSS-HTVDVVDKAGYDGCDASSSTENHSDGDTKIDLKTVGINYFICSTPGHCRTNGGMKLAVNVV 125          
BLAST of DC900165 vs. ExPASy Swiss-Prot
Match: LAML_ARATH (Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.080e-11
Identity = 37/116 (31.90%), Postives = 64/116 (55.17%), Query Frame = 1
Query:   85 IMAALLICLLLVYIEIVDATTYTVGDSGGWS--FNMASWAKGKRFKAGDTLVFNYDPTLHNVVAVNRAGYRSCTAPGGAKVYS--SGKDRIKLVRGQNFFICNSAGHCGSGMKIAI 420
            I A +L  L+   +  V A  YTVG++  W+   N   WA+GK F  GD L F +D   HN++ VN+  Y  C A    + ++  +G+D + L + +++++ +  G C  GMK+++
Sbjct:    8 ITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVFDRNQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSV 123          
BLAST of DC900165 vs. ExPASy Swiss-Prot
Match: ENL1_ARATH (Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.841e-11
Identity = 41/126 (32.54%), Postives = 62/126 (49.21%), Query Frame = 1
Query:   67 SARCATIMAALLICLLLVYIEIVDATTYTVGD-SGGW------SFNMASWAKGKRFKAGDTLVFNYDPTLHNVVAVNRAGYRSCTAPGGAKVYSSGKDRIKLVR-GQNFFICNSAGHCGSGMKIAI 420
            SA  A+    + I  L+    +  A   TVG  SG W      S++   WA+  RFK GD +VF Y+    +V+ V +  Y SC        Y+ G+ ++KL R G  +FI  + GHC  G K+++
Sbjct:    4 SASMASSSLHVAIFSLIFLFSLAAANEVTVGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFIVFRYESGKDSVLEVTKEAYNSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSL 129          
The following BLAST results are available for this feature:
BLAST of DC900165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
BABL_ARATH8.209e-3655.04Basic blue protein OS=Arabidopsis thaliana GN=At2g... [more]
BABL_CUCSA4.504e-3464.89Basic blue protein OS=Cucumis sativus PE=1 SV=1[more]
BABL_LILLO1.712e-3350.79Chemocyanin OS=Lilium longiflorum PE=1 SV=1[more]
BCP_PEA1.456e-1640.87Blue copper protein OS=Pisum sativum PE=2 SV=1[more]
MAVI_CUCPE4.235e-1641.41Mavicyanin OS=Cucurbita pepo PE=1 SV=1[more]
STEL_RHUVE1.043e-1441.18Stellacyanin OS=Rhus vernicifera PE=1 SV=1[more]
BCB2_ARATH1.506e-1337.29Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 ... [more]
LAML_ARATH1.080e-1131.90Lamin-like protein OS=Arabidopsis thaliana GN=At5g... [more]
ENL1_ARATH1.841e-1132.54Early nodulin-like protein 1 OS=Arabidopsis thalia... [more]
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Properties
Property NameValue
Genbank descriptionDC900165 VSS Citrus sinensis cDNA clone VS27V84 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900165 ID=DC900165; Name=DC900165; organism=Citrus sinensis; type=EST; length=633bp
TCTCACTCTCAGCTAGCTAGGTAATTTAGTTAACTTTCTGCTTAGAGAAT
GTCCCAGGGAAGAGGCAGTGCTAGATGTGCCACTATCATGGCTGCACTTC
TAATTTGCCTGCTGCTGGTTTACATCGAAATTGTTGATGCAACAACCTAC
ACTGTTGGAGACTCTGGTGGTTGGAGTTTCAATATGGCTAGTTGGGCGAA
AGGGAAGCGCTTCAAAGCTGGAGACACTCTCGTCTTCAATTACGATCCAA
CGCTCCACAATGTGGTAGCCGTGAACAGAGCAGGTTACCGCAGCTGCACA
GCTCCGGGAGGGGCAAAAGTGTACAGCTCAGGGAAGGATCGCATAAAGTT
GGTGAGGGGGCAGAACTTCTTCATTTGCAACTCTGCTGGGCACTGTGGAT
CTGGCATGAAGATTGCTATTAATGCCATGTAATAAATTGTGAGATGAGTT
AATTAGCACGGCCTAAGGAAAAACTCTCTCTAGCTAATAACTATTAATTA
GCTTTTACGTATTCCTTGCTCAATTATAAGATTTTTCTTGTCTTGTCAAA
CCTATTGTATGCTGCTACTGCTTGTTTATGTTCCTTTGTAGCTCCTGATA
AGATTTTTCTTATGAATGATTTTTAATTTGTAT
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