CN186091

Overview
NameCN186091
Unique NameCN186091
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN186091_ssr351 microsatellite CN186091_ssr351:351..365. BLAST: Citrus ESTs to Prunus persica proteins V1
CN186091_ssr149 microsatellite CN186091_ssr149:149..160. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CN186091 vs. ExPASy Swiss-Prot
Match: GUN25_ARATH (Endoglucanase 25 OS=Arabidopsis thaliana GN=KOR PE=1 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.444e-74
Identity = 135/174 (77.59%), Postives = 145/174 (83.33%), Query Frame = 3
Query:  192 MFGRDPWGGPLEINXXXXXXXXXXXXNLQDFDRAALSRPLDETQQSWLLGPTEKKKKKCVDLGCIIVSRKIFVWTVGTLLVSALLAGFITLIVKTVPRHHHSHARPDNYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQS 713
            M+GRDPWGGPLEIN            NL D DRAALSRPLDETQQSWLLGPTE+KKKK VDLGCIIVSRKIFVWTVGTL+ +ALLAGFITLIVKTVPRHH     PDNYT+ALHKAL FFNAQ+SGKLPKHNNVSWRGNS L+DGK  + S  KDLVGG+YDAGDAIKFNFP +
Sbjct:    1 MYGRDPWGGPLEINTADSATDDDRSRNLNDLDRAALSRPLDETQQSWLLGPTEQKKKKYVDLGCIIVSRKIFVWTVGTLVAAALLAGFITLIVKTVPRHHPKTPPPDNYTIALHKALKFFNAQKSGKLPKHNNVSWRGNSGLQDGKGETGSFYKDLVGGYYDAGDAIKFNFPMA 174          
BLAST of CN186091 vs. ExPASy Swiss-Prot
Match: GUN21_ARATH (Endoglucanase 21 OS=Arabidopsis thaliana GN=KOR3 PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.600e-65
Identity = 121/175 (69.14%), Postives = 137/175 (78.29%), Query Frame = 3
Query:  192 MFGRDPWGGPLEINXXXXXXXXXXXXNLQDFDRAALSRPLDETQQSWLLGPTEKKKKKCVDLGCIIVSRKIFVWTVGTLLVSALLAGFITLIVKTVPRHHHSHARPDNYTLALHKALMFFNAQRSGKLPKH-NNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQS 713
            M+GRDPWGGPLEIN            NLQD DRA  SRPLDETQQSWLLGP   KKKK VDLGCI+VSRKIF+WT+GT++V+ALL+GFITLIVKT+P HHH    PDNYT+AL  AL FFNAQ+SGKLPK+  NVSWR +SCL+DGK       KDLVGG+YDAGD+IKFNFP S
Sbjct:    1 MYGRDPWGGPLEINAADSMTDDDRSRNLQDLDRATPSRPLDETQQSWLLGPKVLKKKKYVDLGCILVSRKIFLWTLGTIVVTALLSGFITLIVKTLPHHHHKEPPPDNYTIALRTALKFFNAQQSGKLPKNIYNVSWRHDSCLQDGKGDPGQCYKDLVGGYYDAGDSIKFNFPMS 175          
BLAST of CN186091 vs. ExPASy Swiss-Prot
Match: GUN9_ORYSJ (Endoglucanase 9 OS=Oryza sativa subsp. japonica GN=GLU1 PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 9.400e-58
Identity = 112/177 (63.28%), Postives = 132/177 (74.58%), Query Frame = 3
Query:  186 MSMFGRDPWGGPLEINXXXXXXXXXXXXNLQDFDRAALSRPLDETQQSWLL---GPTEKKKKKCVDLGCIIVSRKIFVWTVGTLLVSALLAGFITLIVKTVPRHHHSHARPDNYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFP 707
            MSM+GRDPWGGPLEI             NL D DR ALSR LDETQQSWLL   G   +KKKK VDLGC++VSRK+FVWTVG LL +A+ AG +  I K +PRHH     PD++T+AL KALMFFNAQ+SGKLPK+NNV WRGNSC+KDG S   ++ + LVGG+YDAGDA+KFNFP
Sbjct:    1 MSMYGRDPWGGPLEI-CHDSATDDDRSRNL-DLDRGALSRTLDETQQSWLLAGPGDQGRKKKKYVDLGCLVVSRKLFVWTVGVLLAAAVFAGLVAGIAKAIPRHHRPPPPPDDFTVALRKALMFFNAQKSGKLPKNNNVHWRGNSCMKDGLS-DPAVGRSLVGGYYDAGDAVKFNFP 174          
BLAST of CN186091 vs. ExPASy Swiss-Prot
Match: GUN10_ORYSJ (Endoglucanase 10 OS=Oryza sativa subsp. japonica GN=GLU2 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.024e-56
Identity = 113/178 (63.48%), Postives = 128/178 (71.91%), Query Frame = 3
Query:  192 MFGRDPWGGPLEINXXXXXXXXXXXXNLQDFDRAALSRPLDETQQSWLL-GPTE---KKKKKCVDLGCIIVSRKIFVWTVGTLLVSALLAGFITLIVKTVPRHHHSHARPDNYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQS 713
            MFGRDPWGGPLEI+              +D DR AL R LDETQQSWLL GP +   KKKKK VDLGC+++ RKIF+WTVGT+L   L  GF+ +IVK VP        PD YT ALHKALMFFNAQRSG LPKHN VSWRGNSC+KDG S  S++ K LVGGFYDAGDAIKFN+P +
Sbjct:    1 MFGRDPWGGPLEISNADSATDDDRS---RDLDRGALMRQLDETQQSWLLAGPGDQAGKKKKKYVDLGCMVLDRKIFMWTVGTILGVGLFIGFVMMIVKLVPHKRPPPPPPDQYTQALHKALMFFNAQRSGPLPKHNGVSWRGNSCMKDGLS-DSTVRKSLVGGFYDAGDAIKFNYPMA 174          
BLAST of CN186091 vs. ExPASy Swiss-Prot
Match: GUN12_ORYSJ (Endoglucanase 12 OS=Oryza sativa subsp. japonica GN=GLU3 PE=2 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 6.121e-41
Identity = 90/176 (51.14%), Postives = 111/176 (63.07%), Query Frame = 3
Query:  192 MFGRDPWGGPLEINXXXXXXXXXXXXNLQDFDRAALS---RPLDETQQSWLLGPTEKKKK-KCVDLGCIIVSRKIFVWTVGTLLVSALLAGFITLIVKTVPRHHHSHARPDNYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFP 707
            M+  + WGG  EI                D DR ALS     LDETQQSWLLGP E KKK K VDLGC++V RK+  W + TLL + +L G   +I K++P+       PD YT ALHKAL+FFNAQ+SG+LPK+N + WRGNS L DG S  + +   LVGG+YDAGD IKF+FP
Sbjct:    1 MYSANHWGGSFEIAADGAAEDDHSRN--MDLDRGALSARQHQLDETQQSWLLGPPEAKKKDKYVDLGCVVVKRKLLWWVLWTLLAAFILIGLPVIIAKSIPKKKPHAPPPDQYTDALHKALLFFNAQKSGRLPKNNGIKWRGNSGLSDG-SDLTDVKGGLVGGYYDAGDNIKFHFP 173          
BLAST of CN186091 vs. ExPASy Swiss-Prot
Match: GUN7_ARATH (Endoglucanase 7 OS=Arabidopsis thaliana GN=KOR2 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.483e-39
Identity = 86/176 (48.86%), Postives = 111/176 (63.07%), Query Frame = 3
Query:  210 WGGPLEI--NXXXXXXXXXXXXNLQDFDRAALSRP---LDETQQSWLLGPTE---KKKKKCVDLGCIIVSRKIFVWTVGTLLVSALLAGFITLIVKTVPRHHHSHARPDNYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQS 713
            WGG L+   +            N  ++DR A+      LDETQQ WLL P +   KKKKK V+LGC+ VSR +F+WTVG++ V  L+     +IVK++PRH  +   PDNYTLALHKAL FF+AQ+SGKLPK N VSWRG+S  KDG      +   LVGG+YD G  +KF+FP +
Sbjct:    7 WGGSLDAVDSDRIAAEEEERLRNTTEWDRGAIHSQRSELDETQQGWLLAPQDNWRKKKKKYVNLGCVSVSRTVFLWTVGSIAVLFLVVALPIIIVKSLPRHKSAPPPPDNYTLALHKALQFFDAQKSGKLPKKNKVSWRGDSGTKDG---LPDVVGGLVGGYYDGGSNVKFHFPMA 179          
BLAST of CN186091 vs. ExPASy Swiss-Prot
Match: GUN4_THEFU (Endoglucanase E-4 OS=Thermomonospora fusca GN=celD PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.518e-15
Identity = 45/94 (47.87%), Postives = 61/94 (64.89%), Query Frame = 3
Query:  435 SALLAGFITLIVKTVPRHHHSHARPD-NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQS 713
            +AL AG + + + T      +HA P  NY  AL K++ F+ AQRSGKLP++N VSWRG+S L DG    + +  DL GG+YDAGD +KF FP +
Sbjct:   28 AALTAGMLGVPLATGT----AHAEPAFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDG----ADVGLDLTGGWYDAGDHVKFGFPMA 113          
BLAST of CN186091 vs. ExPASy Swiss-Prot
Match: GUN1_ARATH (Endoglucanase 1 OS=Arabidopsis thaliana GN=CEL2 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.518e-15
Identity = 39/76 (51.32%), Postives = 51/76 (67.11%), Query Frame = 3
Query:  486 HHHSHARPDNYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQS 713
            HH  H    NY  AL K+++FF  QRSGKLP +  ++WR NS L DG    S+++ DLVGG+YDAGD +KF FP +
Sbjct:   34 HHRHHLDNHNYKDALSKSILFFEGQRSGKLPPNQRMTWRSNSGLSDG----SALNVDLVGGYYDAGDNMKFGFPMA 105          
BLAST of CN186091 vs. ExPASy Swiss-Prot
Match: GUN17_ARATH (Endoglucanase 17 OS=Arabidopsis thaliana GN=At4g02290 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.983e-15
Identity = 40/76 (52.63%), Postives = 50/76 (65.79%), Query Frame = 3
Query:  486 HHHSHARPDNYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQS 713
            HH  H    NY  AL K+++FF  QRSGKLP +  +SWR +S L DG    S++  DLVGG+YDAGD IKF FP +
Sbjct:   43 HHRHHLAKHNYKDALTKSILFFEGQRSGKLPSNQRMSWRRDSGLSDG----SALHVDLVGGYYDAGDNIKFGFPMA 114          
BLAST of CN186091 vs. ExPASy Swiss-Prot
Match: GUN3_ORYSJ (Endoglucanase 3 OS=Oryza sativa subsp. japonica GN=GLU8 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.590e-15
Identity = 47/94 (50.00%), Postives = 56/94 (59.57%), Query Frame = 3
Query:  426 LLVSALLAGFITLIVKTVPRHHHSHARPDNYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFP 707
            L + A+L       V      HH  A P +Y  AL K+++FF  QRSGKLP    VSWRG+S L DG    SSI  DLVGG+YDAGD +KF FP
Sbjct:    7 LFLLAVLLPHRNAAVVAAASPHHGPA-PHDYRDALTKSILFFEGQRSGKLPPSQRVSWRGDSGLSDG----SSIKVDLVGGYYDAGDNMKFGFP 95          
The following BLAST results are available for this feature:
BLAST of CN186091 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
GUN25_ARATH1.444e-7477.59Endoglucanase 25 OS=Arabidopsis thaliana GN=KOR PE... [more]
GUN21_ARATH1.600e-6569.14Endoglucanase 21 OS=Arabidopsis thaliana GN=KOR3 P... [more]
GUN9_ORYSJ9.400e-5863.28Endoglucanase 9 OS=Oryza sativa subsp. japonica GN... [more]
GUN10_ORYSJ3.024e-5663.48Endoglucanase 10 OS=Oryza sativa subsp. japonica G... [more]
GUN12_ORYSJ6.121e-4151.14Endoglucanase 12 OS=Oryza sativa subsp. japonica G... [more]
GUN7_ARATH7.483e-3948.86Endoglucanase 7 OS=Arabidopsis thaliana GN=KOR2 PE... [more]
GUN4_THEFU1.518e-1547.87Endoglucanase E-4 OS=Thermomonospora fusca GN=celD... [more]
GUN1_ARATH1.518e-1551.32Endoglucanase 1 OS=Arabidopsis thaliana GN=CEL2 PE... [more]
GUN17_ARATH1.983e-1552.63Endoglucanase 17 OS=Arabidopsis thaliana GN=At4g02... [more]
GUN3_ORYSJ2.590e-1550.00Endoglucanase 3 OS=Oryza sativa subsp. japonica GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F15_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186091 ID=CN186091; Name=CN186091; organism=Citrus sinensis; type=EST; length=714bp
AGGATTTGACAGCCAGATCAGAGCACCACCGTCACCACCAAATCACACCA
CACAACTCTACAAAACCAGACCGGAGCATTCACAGTACAAACTTTCCATC
TTAATTCTTGAGAGAGAAAGAGATCTAACATATCTTTAGCTGAGGGGAGA
GTGAGTGAGTGTGAGATTTGATTTGGTAACAAACAATGAGTATGTTTGGA
AGAGATCCGTGGGGTGGCCCACTGGAGATCAACGCGGCGGACTCAGCCAC
TGACGACGATCGGAGCAGGAACCTTCAGGATTTCGACAGGGCAGCTCTGT
CTCGGCCCTTGGATGAGACCCAGCAGAGCTGGCTTCTGGGTCCCACCGAA
AAGAAGAAGAAGAAGTGCGTAGATCTGGGTTGCATCATCGTCAGCCGGAA
GATCTTCGTCTGGACTGTCGGCACTCTTCTCGTCTCCGCACTCTTAGCCG
GCTTCATCACTCTTATTGTCAAAACGGTGCCGCGTCATCACCACTCTCAT
GCTCGCCCTGATAATTACACTCTCGCTTTGCACAAGGCCCTCATGTTCTT
CAATGCCCAACGATCTGGCAAATTACCCAAGCATAATAACGTTTCTTGGA
GGGGAAATTCTTGTCTGAAGGATGGCAAATCGGCTTCCTCTAGTATTTCC
AAGGATCTGGTTGGGGGTTTTTACGATGCTGGGGATGCCATTAAGTTTAA
TTTTCCTCAATCTT
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