CN186081

Overview
NameCN186081
Unique NameCN186081
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10238 contig Csv1_Contig10238:1143..1914. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186081 vs. ExPASy Swiss-Prot
Match: KSG7_ARATH (Shaggy-related protein kinase eta OS=Arabidopsis thaliana GN=ASK7 PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 3.067e-28
Identity = 56/65 (86.15%), Postives = 63/65 (96.92%), Query Frame = -1
Query:  578 LEACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQLGLNFLHPAGT 772
            LEACAHPFFDELREPNARLPNGRP PPLFNFKQE++G+SPELVNKLIPDH+KRQLGL+FL+ +GT
Sbjct:  316 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEVAGSSPELVNKLIPDHIKRQLGLSFLNQSGT 380          
BLAST of CN186081 vs. ExPASy Swiss-Prot
Match: KSG6_ARATH (Shaggy-related protein kinase zeta OS=Arabidopsis thaliana GN=ASK6 PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 9.234e-25
Identity = 52/64 (81.25%), Postives = 58/64 (90.62%), Query Frame = -1
Query:  581 LEACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQLGLNFLHPAG 772
            LEACAHPFF+ELREPNARLPNGRPLPPLFNFKQELSGASPEL+N+LIP+HV+RQ+   F   AG
Sbjct:  348 LEACAHPFFNELREPNARLPNGRPLPPLFNFKQELSGASPELINRLIPEHVRRQMNGGFPFQAG 411          
BLAST of CN186081 vs. ExPASy Swiss-Prot
Match: KSG9_ARATH (Shaggy-related protein kinase iota OS=Arabidopsis thaliana GN=ASK9 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.925e-22
Identity = 47/55 (85.45%), Postives = 53/55 (96.36%), Query Frame = -1
Query:  608 LEACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQL 772
            LEACAHPFF+ELREPNARLPNGRPLPPLFNFKQEL GAS EL+N+LIP+HV+RQ+
Sbjct:  346 LEACAHPFFNELREPNARLPNGRPLPPLFNFKQELGGASMELINRLIPEHVRRQM 400          
BLAST of CN186081 vs. ExPASy Swiss-Prot
Match: KSG4_ARATH (Shaggy-related protein kinase delta OS=Arabidopsis thaliana GN=ASK4 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.571e-19
Identity = 43/62 (69.35%), Postives = 51/62 (82.26%), Query Frame = -1
Query:  590 LEACAHPFFDELREPNARLPNGRPLPPLFNFK-QELSGASPELVNKLIPDHVKRQLGLNFLH 772
            +EAC HPFFDELR+PNARLPNGRPLPPLFNFK QELSG  PE V++L+P+H ++Q     LH
Sbjct:  358 VEACIHPFFDELRDPNARLPNGRPLPPLFNFKPQELSGIPPETVDRLVPEHARKQNHFMALH 419          
BLAST of CN186081 vs. ExPASy Swiss-Prot
Match: KSG10_ARATH (Shaggy-related protein kinase kappa OS=Arabidopsis thaliana GN=ASK10 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 9.888e-19
Identity = 43/62 (69.35%), Postives = 50/62 (80.65%), Query Frame = -1
Query:  590 LEACAHPFFDELREPNARLPNGRPLPPLFNFK-QELSGASPELVNKLIPDHVKRQLGLNFLH 772
            LEAC HP FDELR+PN RLPNGRPLPPLFNFK QELSG  PE+VN+L+P+H ++Q     LH
Sbjct:  359 LEACIHPLFDELRDPNTRLPNGRPLPPLFNFKPQELSGIPPEIVNRLVPEHARKQNLFMALH 420          
BLAST of CN186081 vs. ExPASy Swiss-Prot
Match: KSG5_ARATH (Shaggy-related protein kinase epsilon OS=Arabidopsis thaliana GN=ASK5 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.086e-17
Identity = 41/55 (74.55%), Postives = 47/55 (85.45%), Query Frame = -1
Query:  611 LEACAHPFFDELREPNARLPNGRPLPPLFNFK-QELSGASPELVNKLIPDHVKRQ 772
            +EA  HPFFDELR+PN RLPNGR LPPLFNFK QEL GAS EL++KLIPDH ++Q
Sbjct:  350 MEAIVHPFFDELRDPNTRLPNGRALPPLFNFKPQELKGASLELLSKLIPDHARKQ 404          
BLAST of CN186081 vs. ExPASy Swiss-Prot
Match: KSG2_ARATH (Shaggy-related protein kinase beta OS=Arabidopsis thaliana GN=ASK2 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.478e-14
Identity = 37/54 (68.52%), Postives = 46/54 (85.19%), Query Frame = -1
Query:  614 LEACAHPFFDELREPNARLPNGRPLPPLFNF-KQELSGASPELVNKLIPDHVKR 772
            LEACAHPFFD+LR+P A LPNGR LPPLF+F  QEL+GAS EL ++LIP+H ++
Sbjct:  378 LEACAHPFFDDLRDPRASLPNGRALPPLFDFTAQELAGASVELRHRLIPEHARK 431          
BLAST of CN186081 vs. ExPASy Swiss-Prot
Match: MSK2_MEDSA (Glycogen synthase kinase-3 homolog MsK-2 OS=Medicago sativa GN=MSK-2 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.930e-14
Identity = 37/58 (63.79%), Postives = 43/58 (74.14%), Query Frame = -1
Query:  602 LEACAHPFFDELREPNARLPNGRPLPPLFNFK-QELSGASPELVNKLIPDHVKRQLGL 772
            LEA  HPFFDELR+PN RLPNGR LPPLFNFK  EL G   E++ KL+P H ++Q  L
Sbjct:  350 LEALVHPFFDELRDPNTRLPNGRHLPPLFNFKANELKGVPAEMLVKLVPSHARKQCSL 407          
BLAST of CN186081 vs. ExPASy Swiss-Prot
Match: KSG8_ARATH (Shaggy-related protein kinase theta OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 1.930e-14
Identity = 38/51 (74.51%), Postives = 42/51 (82.35%), Query Frame = -1
Query:  623 LEACAHPFFDELREPNARLPNGRPLPPLFNF-KQELSGASPELVNKLIPDH 772
            LEACAHPFFD+LR+PN  LPNGR LPPLFNF  QEL+GAS EL  +LIP H
Sbjct:  414 LEACAHPFFDDLRDPNVSLPNGRALPPLFNFTAQELAGASTELRQRLIPAH 464          
BLAST of CN186081 vs. ExPASy Swiss-Prot
Match: KSG3_ARATH (Shaggy-related protein kinase gamma OS=Arabidopsis thaliana GN=ASK3 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.292e-14
Identity = 36/55 (65.45%), Postives = 44/55 (80.00%), Query Frame = -1
Query:  611 LEACAHPFFDELREPNARLPNGRPLPPLFNFK-QELSGASPELVNKLIPDHVKRQ 772
            L++  HPFFDELR+PNARLPNGR LPPLFNFK  EL G   E+V KL+P+H ++Q
Sbjct:  349 LDSLVHPFFDELRDPNARLPNGRFLPPLFNFKPHELKGVPVEMVAKLVPEHARKQ 403          
The following BLAST results are available for this feature:
BLAST of CN186081 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
KSG7_ARATH3.067e-2886.15Shaggy-related protein kinase eta OS=Arabidopsis t... [more]
KSG6_ARATH9.234e-2581.25Shaggy-related protein kinase zeta OS=Arabidopsis ... [more]
KSG9_ARATH1.925e-2285.45Shaggy-related protein kinase iota OS=Arabidopsis ... [more]
KSG4_ARATH7.571e-1969.35Shaggy-related protein kinase delta OS=Arabidopsis... [more]
KSG10_ARATH9.888e-1969.35Shaggy-related protein kinase kappa OS=Arabidopsis... [more]
KSG5_ARATH7.086e-1774.55Shaggy-related protein kinase epsilon OS=Arabidops... [more]
KSG2_ARATH1.478e-1468.52Shaggy-related protein kinase beta OS=Arabidopsis ... [more]
MSK2_MEDSA1.930e-1463.79Glycogen synthase kinase-3 homolog MsK-2 OS=Medica... [more]
KSG8_ARATH1.930e-1474.51Shaggy-related protein kinase theta OS=Arabidopsis... [more]
KSG3_ARATH3.292e-1465.45Shaggy-related protein kinase gamma OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F10_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186081 ID=CN186081; Name=CN186081; organism=Citrus sinensis; type=EST; length=772bp
TTTTTTTTTTTTAGGGGGCAAGCAAGCATTTCCAAGAGGAGCATTTCAGT
AACATTACTTTGCACAAACAGCAAGTGACAACCACTGTCTGCAATTTGAA
GTCAGTCACCACAGACCATCAAAATAGAGAAATTGAAAGACTTGCAAAGA
GGGAAAAGAAAAACAGGACCAAACCTGACAACATCATGCCCACCCCATCT
TCTGGGCCATTCTCTTTGGGGCTTTCTTCCTAGGTACAAATACATTTTTC
CTCAGTTTTTCCTCTACTAACAGCAGTCTGATCAGTCCACCTTATCAACT
TAACCTATCTTTACTATCAAACATGTACATAAACAAATGGGAACTTTAAC
AGAGGAGGGGGGGTGGGACGAAGTGGGGAGGAGACACAGGAGGATGGAAA
AGCAGAAAAAGAAGGCACCAAGAAAAGCATAGCTGCCTGAGAATGTAGGC
TTGCTGATCGAGCAACAACTGATGCTGATTAAGCCTCAATGCATGGCAGT
TACGAACAAGGATATAATTCCCTTTGTGCTACACATCACCAAGTAGATTT
CACTTCTATATTACTTGTCTAGACCTATGTCCCGGCTGGATGCAAGAAAT
TCAGACCTAATTGCCGTTTCACATGGTCTGGTATCAACTTATTAACAAGC
TCTGGTGAAGCCCCCGATAATTCCTGTTTAAAGTTGAAGAGAGGTGGCAG
TGGGCGGCCATTTGGTAGGCGAGCATTTGGCTCACGCAGTTCATCAAAGA
AAGGATGTGCACATGCTTCTAG
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