CN186077

Overview
NameCN186077
Unique NameCN186077
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length670
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13760 contig Csv1_Contig13760:241..912. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CN186077 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.539e-18
Identity = 49/116 (42.24%), Postives = 63/116 (54.31%), Query Frame = -1 
Query:  356 CPLDVVQLSSPTERDHYVRLLPFDNST-VVRESTDLNL-----------IEPVWTVGNYNDSLGKWFLTTGGIIGHPGAKTLLNWFKLEKVSVSIYNLVHCPSVCDSCVKLCNKVG 667
            CP  VVQ  S  +    V     D+   VVR STD+N+              VW + NY++S GKW++TT G+ G PG  TL +WFK+EK  V  Y    CPSVCDSC  LC+ +G
Sbjct:   69 CPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPIRDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLGYKFRFCPSVCDSCTTLCSDIG 184
[Close]
BLAST of CN186077 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 4.686e-16
Identity = 46/119 (38.66%), Postives = 65/119 (54.62%), Query Frame = -1 
Query:  350 CPLDVVQLSSPTERDHYVRLLPFD-NSTVVRESTDLNL-----------IEPVWTVGNYNDSLGKWFLTTGGIIGHPGAKTLLNWFKLEKVSVS-IYNLVHCPSVCDSCVKLCNKVGIF 667
            CP  VVQ     + D  +   P +    VVR STDLN+              VW +  Y++S G++F+T GG+ G+PG +T+ +WFK+E+   S  Y LV CP+VC SC   C  VGI+
Sbjct:   76 CPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCGSGFYKLVFCPTVCGSCKVKCGDVGIY 194
The following BLAST results are available for this feature:
BLAST of CN186077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ASP_THECC6.539e-1842.2421 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU4.686e-1638.66Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F08_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186077 ID=CN186077; Name=CN186077; organism=Citrus sinensis; type=EST; length=670bp
TTTACACCTTAAAGGATAACAATTGNNTNCGTGTTAAANACTCAAACCTA
GTAATCTCTTGAGCCTTCAGTCCAAAATGCCCCGGAATCGATCGTCATTT
TTTTCCCCCTTTTACACATAACAAAGTAGAAATTAACAGCATAAATATAT
CCCAGGCTAGCTAATTTATTTACTATTAATCATAGAGATTAGAGTACTAG
CTAGCCTGGTAAATTATTCAGAATATATAATATAGCTAGGTAATTCATTA
CATAGAGGATCTTGAAGGATTAGGAGCTGGAAATAACACCAACCGCAGAG
GCTGATCATCATCACGAACCAGAACTAGACGTCGAACGCCGTCCACATAG
AAGATGCCGACTTTGTTACAGAGTTTAACGCAAGAATCGCAAACAGATGG
ACAATGAACAAGATTGTATATACTGACACTAACTTTCTCAAGCTTAAACC
AATTTAGCAACGTTTTAGCTCCTGGGTGGCCGATGATTCCGCCGGTTGTT
AGAAACCATTTTCCTAATGAATCATTATAGTTTCCAACTGTCCATACTGG
TTCTATCAAGTTGAGATCAGTGGATTCCCGGACAACTGTAGAATTGTCAA
ACGGTAATAATCTTACATAATGATCCCTTTCCGTAGGAGAACTTAGTTGG
ACAACGTCCAACGGACACTC
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