DC900149

Overview
NameDC900149
Unique NameDC900149
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12501 contig Csv1_Contig12501:1126..1918. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: PMGI_MESCR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mesembryanthemum crystallinum GN=PGM1 PE=2 SV=1)

HSP 1 Score: 354.369 bits (908), Expect = 4.259e-97
Identity = 172/206 (83.50%), Postives = 191/206 (92.72%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLL-KDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSLI 616
            NGVRTFACSETVKFGHVTFFWNGNRSGYF   +EEYVEIPSDSGITFNVQPKMKALEIAE+A+ AILS +F QVRVNLPNSDMVGHTGDIEATVVACKAADEAVK+IIDAIE+VGGIY++TADHGNAEDMVKR+K G+P + K+GNIQ+LTSHTL+PVPIAIGGPGL   V+FR D+P GGLANVAAT +NLHG+EAPSDYEP+LI
Sbjct:  349 NGVRTFACSETVKFGHVTFFWNGNRSGYFKPEMEEYVEIPSDSGITFNVQPKMKALEIAEKARDAILSGKFDQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKMIIDAIEQVGGIYVITADHGNAEDMVKRDKKGQPAMDKNGNIQILTSHTLEPVPIAIGGPGLTPGVRFRNDIPTGGLANVAATVMNLHGFEAPSDYEPTLI 554          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: PMGI_PRUDU (2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Fragment) OS=Prunus dulcis PE=2 SV=1)

HSP 1 Score: 352.443 bits (903), Expect = 1.619e-96
Identity = 172/206 (83.50%), Postives = 191/206 (92.72%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLL-KDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSLI 616
            NGVRTFACSETVKFGHVTFFWNGNRSGYF+  +EEYVEIPSDSGITFNVQPKMKA+EIAE+ + AILS++F QVRVNLPNSDMVGHT  IEATVVACKAADEAVKIIIDAIE+VGGIY+VTADHGNAEDMVKRNK G+PLL K+GNIQ+LTSHTL+PVPIAIGGPGL   V+FR D+PNGGLANVAAT +NLHG+EAP+DYE +LI
Sbjct:  278 NGVRTFACSETVKFGHVTFFWNGNRSGYFNPQMEEYVEIPSDSGITFNVQPKMKAVEIAEKGRGAILSKKFEQVRVNLPNSDMVGHTSSIEATVVACKAADEAVKIIIDAIEQVGGIYVVTADHGNAEDMVKRNKKGQPLLDKNGNIQILTSHTLQPVPIAIGGPGLAPGVQFRKDVPNGGLANVAATVMNLHGFEAPADYETTLI 483          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: PMGI_TOBAC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 350.903 bits (899), Expect = 4.709e-96
Identity = 172/206 (83.50%), Postives = 188/206 (91.26%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLL-KDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSLI 616
            NGVRTFACSETVKFGHVTFFWNGNRSGYF+  LEEYVEIPSDSGITFNV+PKMKALEIAER + AILS +F QVRVNLPN DMVGHTGDI+AT+ ACK+ADEAVK+I++AIE+VGGIYLVTADHGNAEDMVKRNK GEP L K+GNIQ+LTSHT +PVPIAIGGPGL   V+FR DLP GGLANVAATF+NLHG EAPSDYEPSLI
Sbjct:  349 NGVRTFACSETVKFGHVTFFWNGNRSGYFNEKLEEYVEIPSDSGITFNVKPKMKALEIAERTRDAILSGKFDQVRVNLPNGDMVGHTGDIKATIEACKSADEAVKMILEAIEQVGGIYLVTADHGNAEDMVKRNKKGEPALDKNGNIQILTSHTCEPVPIAIGGPGLAPGVRFRQDLPTGGLANVAATFMNLHGSEAPSDYEPSLI 554          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: PMGI_RICCO (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Ricinus communis PE=1 SV=2)

HSP 1 Score: 345.51 bits (885), Expect = 1.979e-94
Identity = 166/206 (80.58%), Postives = 188/206 (91.26%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLL-KDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSLI 616
            NGV TFACSETVKFGHVTFFWNGNRSGYF+  +EEYVEIPSD GITFNVQPKMKA+EIAE+A+ AILS +F QVRVN+PN DMVGHTGD+EATVV CKAADEAVK+IIDAIE+VGGIY+VTADHGNAEDMVKR+KSG+P+  K G IQ+LTSHTL+PVPIAIGGPGL   V+FR+D+P GGLANVAAT +NLHG+EAPSDYEP+LI
Sbjct:  346 NGVHTFACSETVKFGHVTFFWNGNRSGYFNPEMEEYVEIPSDVGITFNVQPKMKAIEIAEKARDAILSGKFQQVRVNIPNGDMVGHTGDVEATVVGCKAADEAVKMIIDAIEQVGGIYVVTADHGNAEDMVKRDKSGKPMADKSGKIQILTSHTLQPVPIAIGGPGLTPGVRFRSDIPTGGLANVAATVMNLHGFEAPSDYEPTLI 551          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: PMGI_MAIZE (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Zea mays PE=1 SV=1)

HSP 1 Score: 341.273 bits (874), Expect = 3.731e-93
Identity = 166/206 (80.58%), Postives = 186/206 (90.29%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLL-KDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSLI 616
            NG+RTFACSETVKFGHVTFFWNGNRSGYFD+  EEYVE+PSDSGITFNV P MKALEIAE+A+ A+LS +F QVRVNLPN DMVGHTGDIEATVVACKAADEAVKII+DA+E+VGGIYLVTADHGNAEDMVKRNKSG+PLL K+  IQ+LTSHTL+PVP+AIGGPGL   VKFR D+   GLANVAAT +NLHG+EAP+DYE +LI
Sbjct:  349 NGIRTFACSETVKFGHVTFFWNGNRSGYFDATKEEYVEVPSDSGITFNVAPNMKALEIAEKARDALLSGKFDQVRVNLPNGDMVGHTGDIEATVVACKAADEAVKIILDAVEQVGGIYLVTADHGNAEDMVKRNKSGKPLLDKNDRIQILTSHTLQPVPVAIGGPGLHPGVKFRNDIQTPGLANVAATVMNLHGFEAPADYEQTLI 554          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: PMG2_ARATH (Probable 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2 OS=Arabidopsis thaliana GN=At3g08590 PE=2 SV=1)

HSP 1 Score: 338.961 bits (868), Expect = 1.852e-92
Identity = 167/206 (81.07%), Postives = 186/206 (90.29%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLL-KDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSLI 616
            NGVRTFACSETVKFGHVTFFWNGNRSGYF+  LEEYVEIPSDSGI+FNVQPKMKALEIAE+A+ AILS +F QVRVNLPN DMVGHTGDIEATVVAC+AAD AV+ I+DAIE+VGGIY+VTADHGNAEDMVKR+KSG+P L K+GN+Q+LTSHTLKPVPIAIGGPGL   V+FR D+   GLANVAAT +NLHG+ APSDYE SLI
Sbjct:  350 NGVRTFACSETVKFGHVTFFWNGNRSGYFNEKLEEYVEIPSDSGISFNVQPKMKALEIAEKARDAILSGKFDQVRVNLPNGDMVGHTGDIEATVVACEAADRAVRTILDAIEQVGGIYVVTADHGNAEDMVKRDKSGKPALDKEGNLQILTSHTLKPVPIAIGGPGLSAGVRFRQDIETPGLANVAATVMNLHGFVAPSDYETSLI 555          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: PMG1_ARATH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1 OS=Arabidopsis thaliana GN=PGM1 PE=2 SV=3)

HSP 1 Score: 332.413 bits (851), Expect = 1.733e-90
Identity = 164/206 (79.61%), Postives = 183/206 (88.83%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLL-KDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSLI 616
            NGV TFACSETVKFGHVTFFWNGNRSGYF+  LEEYVEIPSDSGI+FNVQPKMKALEI E+A+ AILS +F QVRVN+PN DMVGHTGDIEATVVAC+AAD AVK+I DAIE+V GIY+VTADHGNAEDMVKR+KSG+P L K+G +Q+LTSHTLKPVPIAIGGPGL   V+FR DL   GLANVAAT +NLHG+ APSDYEP+LI
Sbjct:  348 NGVSTFACSETVKFGHVTFFWNGNRSGYFNEKLEEYVEIPSDSGISFNVQPKMKALEIGEKARDAILSGKFDQVRVNIPNGDMVGHTGDIEATVVACEAADLAVKMIFDAIEQVKGIYVVTADHGNAEDMVKRDKSGKPALDKEGKLQILTSHTLKPVPIAIGGPGLAQGVRFRKDLETPGLANVAATVMNLHGFVAPSDYEPTLI 553          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_LEPIN (Probable 2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Leptospira interrogans GN=gpmI PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 8.429e-45
Identity = 104/207 (50.24%), Postives = 133/207 (64.25%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKD--GNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSLI 616
            + +  +A SET K+GHVT+FWNGN+SGYFD N EEY EI SD  I F+  P+MKAL I E  +KA+   +    RVN  N DMVGHTG+  ATV A +  D  V+ +    EK   + LVTADHGNA++M + +K G  + KD  GN    TSHTL PVPI+I  P   + ++F + L N GLANVAAT +++ GYE P  Y PSLI
Sbjct:  346 SNIPQYALSETQKYGHVTYFWNGNKSGYFDQNSEEYREILSDV-IPFDQSPEMKALLITEALEKALNENKQDFYRVNYANGDMVGHTGNYLATVQAMEFLDGCVERLWKTCEKQNIVLLVTADHGNADEMFQLDKKGN-VEKDSHGNPIPKTSHTLNPVPISILDP--ENKIRFNSKLSNPGLANVAATILDVMGYETPEGYHPSLI 548          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_LEPIC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=gpmI PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 8.429e-45
Identity = 104/207 (50.24%), Postives = 133/207 (64.25%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKD--GNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSLI 616
            + +  +A SET K+GHVT+FWNGN+SGYFD N EEY EI SD  I F+  P+MKAL I E  +KA+   +    RVN  N DMVGHTG+  ATV A +  D  V+ +    EK   + LVTADHGNA++M + +K G  + KD  GN    TSHTL PVPI+I  P   + ++F + L N GLANVAAT +++ GYE P  Y PSLI
Sbjct:  346 SNIPQYALSETQKYGHVTYFWNGNKSGYFDQNSEEYREILSDV-IPFDQSPEMKALLITEALEKALNENKQDFYRVNYANGDMVGHTGNYLATVQAMEFLDGCVERLWKTCEKQNIVLLVTADHGNADEMFQLDKKGN-VEKDSHGNPIPKTSHTLNPVPISILDP--ENKIRFNSKLSNPGLANVAATILDVMGYETPEGYHPSLI 548          
BLAST of DC900149 vs. ExPASy Swiss-Prot
Match: GPMI_PSEP1 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=gpmI PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.438e-30
Identity = 84/197 (42.64%), Postives = 108/197 (54.82%), Query Frame = 2
Query:    2 NGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAP 592
            NG      +ET K+ HVTFF++G R   F+   EE + IPS    T+++QP+M A E+ +R  +AI  +RF  + VN  N DMVGHTG  EA V A +A D  V  I+DA+EKVGG  L+TADHGN E M                Q  T+HT +PVP    G     +VK R     G LA+VA T + L G E P
Sbjct:  321 NGKTQLRIAETEKYAHVTFFFSGGREEPFEG--EERILIPSPKVATYDLQPEMSAPEVTDRIVEAIEQQRFDVIVVNYANGDMVGHTGVFEAAVKAVEALDTCVGRIVDALEKVGGEALITADHGNVEQMEDECTG----------QAHTAHTTEPVPFIYVG---KRNVKVR---EGGVLADVAPTMLKLLGLEKP 499          
The following BLAST results are available for this feature:
BLAST of DC900149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
PMGI_MESCR4.259e-9783.502,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMGI_PRUDU1.619e-9683.502,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMGI_TOBAC4.709e-9683.502,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMGI_RICCO1.979e-9480.582,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMGI_MAIZE3.731e-9380.582,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMG2_ARATH1.852e-9281.07Probable 2,3-bisphosphoglycerate-independent phosp... [more]
PMG1_ARATH1.733e-9079.612,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LEPIN8.429e-4550.24Probable 2,3-bisphosphoglycerate-independent phosp... [more]
GPMI_LEPIC8.429e-4550.242,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEP13.438e-3042.642,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionDC900149 VSS Citrus sinensis cDNA clone VS27V69 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900149 ID=DC900149; Name=DC900149; organism=Citrus sinensis; type=EST; length=793bp
TAATGGTGTCCGGACTTTTGCTTGCAGTGAGACTGTCAAGTTTGGACATG
TCACTTTCTTCTGGAATGGAAACCGCTCTGGGTATTTCGACTCGAATTTG
GAGGAATATGTGGAAATTCCTAGTGATTCTGGAATTACTTTCAATGTACA
GCCCAAGATGAAGGCTTTGGAGATTGCTGAAAGGGCAAAGAAGGCCATCC
TTAGTCGCAGGTTCCACCAGGTGCGTGTTAACCTACCAAATAGTGACATG
GTGGGGCACACGGGAGATATTGAGGCAACAGTGGTGGCATGCAAGGCTGC
TGATGAAGCTGTCAAGATAATCATTGATGCAATAGAGAAAGTTGGTGGAA
TATATCTTGTTACTGCAGATCATGGCAATGCTGAGGACATGGTCAAGAGG
AACAAATCTGGGGAGCCTCTTCTTAAGGATGGCAATATTCAAGTGCTCAC
GTCTCACACTCTTAAACCCGTTCCCATTGCAATCGGAGGTCCTGGACTGC
CAGATGATGTCAAGTTCCGCACAGATCTCCCTAATGGTGGGCTGGCCAAT
GTAGCAGCAACTTTTATCAATCTCCATGGATATGAGGCGCCTAGTGACTA
CGAGCCAAGTCTTATTGAAGTAACTGACGACTGAGAAGTAACTGACGACT
GGGCGAACAATGGATCGTCGCCTAGATTTTATAACTCCGGAGGAATTCCG
TTAAAACGTAAAACAATAAATTGAATTTTGGGGTCTTGAATTCATTTTGA
TACGCGTGCTGTTTTTCAGCTTACATTTCGATTGCTGTCTGTT
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