CN186056

Overview
NameCN186056
Unique NameCN186056
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length745
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9594 contig Csv1_Contig9594:462..1206. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186056 vs. ExPASy Swiss-Prot
Match: ER25A_DICDI (Putative C-4 methylsterol oxidase DDB_G0270946 OS=Dictyostelium discoideum GN=DDB_G0270946 PE=3 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.102e-35
Identity = 62/112 (55.36%), Postives = 82/112 (73.21%), Query Frame = -1
Query:  401 YKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPAITGPHLMTLWLWMVLRVLETVEAHCGYHFPWSLSNFIPLYGGADFHDYHHRLLYTKSGNYSSTFVYIAWIFGT 736
            YK++H VHH+YA+PFG+T+EYAHP E + LG  T++GP +    L TLW+W+ +R+ +TVE H GY FPWS +N IP +GGA FHDYHH +     GNY+STF Y+  IFGT
Sbjct:  141 YKYIHKVHHDYASPFGITAEYAHPLETIILGVGTVIGPFLFSRDLFTLWVWLGVRLYQTVECHSGYDFPWSFTNLIPFWGGAPFHDYHHEVFI---GNYASTFTYLDKIFGT 249          
BLAST of CN186056 vs. ExPASy Swiss-Prot
Match: ER25B_DICDI (Putative C-4 methylsterol oxidase DDB_G0269788 OS=Dictyostelium discoideum GN=DDB_G0269788 PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.591e-34
Identity = 62/123 (50.41%), Postives = 83/123 (67.48%), Query Frame = -1
Query:  368 YKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPAITGPHLMTLWLWMVLRVLETVEAHCGYHFPWSLSNFIPLYGGADFHDYHHRLLYTKSGNYSSTFVYIAWIFGTDKGYRKLKALK 736
            YKH+H VHH++A PFG+T+EYAHP E + LG  T++GP +    L TLW+W+  R+ +TVE H GY FPW+ +  IP +GG+ FHD+HH    T  GNYSSTF Y+  IFGT   Y   K ++
Sbjct:  141 YKHIHKVHHDHAAPFGMTAEYAHPLETVILGVGTVIGPFLFSRDLFTLWVWLGTRLFQTVECHSGYDFPWNPTKLIPFWGGSHFHDFHHE---TFVGNYSSTFTYLDKIFGTSDKYYSRKQIR 260          
BLAST of CN186056 vs. ExPASy Swiss-Prot
Match: ERG25_SCHPO (C-4 methylsterol oxidase OS=Schizosaccharomyces pombe GN=erg25 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.305e-28
Identity = 55/126 (43.65%), Postives = 82/126 (65.08%), Query Frame = -1
Query:  374 YKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPAIT-----GPHLMTLWLWMVLRVLETVEAHCGYHFPWSLSNFIPLYGGADFHDYHHRLLYTKSGNYSSTFVYIAWIFGTDKGYRKLKA 736
            Y+ +H VHH Y+ PFGL++EYAHP EI+ LG  T+  P +        HL+T+++W+ LR+ + V++H GY FPWSL+ F+P++ GAD HDYHH        N+SS+F +   +  TD+ Y + KA
Sbjct:  163 YRFIHKVHHRYSAPFGLSAEYAHPLEIILLGAGTVFVPLMWCYFTHDLHLVTMYIWITLRLFQAVDSHAGYDFPWSLNKFLPIWAGADHHDYHHMAF---KDNFSSSFRWWDAVLKTDQNYHQFKA 285          
BLAST of CN186056 vs. ExPASy Swiss-Prot
Match: ERG25_CANAL (C-4 methylsterol oxidase OS=Candida albicans GN=ERG25 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.906e-28
Identity = 64/138 (46.38%), Postives = 83/138 (60.14%), Query Frame = -1
Query:  338 YKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPA----ITGP-HLMTLWLWMVLRVLETVEAHCGYHFPWSLSNFIPLYGGADFHDYHHRLLYTKSGNYSSTFVYIAWIFGTDKGYRKLKALKSFGIEDDPKQ 736
            YK++H  HH YA PFGL +EYAHP E+  LG  T+  P     ITG  HL T+ +W++LR+ + V+AH GY FPWSL NF+P + GAD HD HH       G YSS+F +  +I  T+ G +  K     G ED  KQ
Sbjct:  169 YKYIHKQHHRYAAPFGLAAEYAHPVEVALLGLGTVGIPIVWCLITGNLHLFTVSIWIILRLFQAVDAHSGYEFPWSLHNFLPFWAGADHHDEHHHYFI---GGYSSSFRWWDFILDTEAGPKAKK-----GREDKVKQ 298          
BLAST of CN186056 vs. ExPASy Swiss-Prot
Match: ERG25_RAT (C-4 methylsterol oxidase OS=Rattus norvegicus GN=Sc4mol PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.474e-28
Identity = 55/119 (46.22%), Postives = 75/119 (63.03%), Query Frame = -1
Query:  389 KWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPAITGPHLMTLWLWMVLRVLETVEAHCGYHFPWSLSNFIPLYGGADFHDYHHRLLYTKSGNYSSTFVYIAWIFGTDKGY 745
            K +YK++H VHHE+  PFG+ +EYAHP E L LG    +G  +   H++ LW W+ +R+LET++ H GY  P +  N+IP Y GA  HD+HH       GNY+STF +   IFGTD  Y
Sbjct:  163 KRIYKYIHKVHHEFQAPFGIEAEYAHPLETLILGTGFFIGIVLLCDHVILLWAWVTMRLLETIDVHSGYDIPLNPLNYIPFYTGARHHDFHHMNFI---GNYASTFTWWDRIFGTDVQY 278          
BLAST of CN186056 vs. ExPASy Swiss-Prot
Match: ERG25_PONAB (C-4 methylsterol oxidase OS=Pongo abelii GN=SC4MOL PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.104e-27
Identity = 54/119 (45.38%), Postives = 74/119 (62.18%), Query Frame = -1
Query:  389 KWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPAITGPHLMTLWLWMVLRVLETVEAHCGYHFPWSLSNFIPLYGGADFHDYHHRLLYTKSGNYSSTFVYIAWIFGTDKGY 745
            K +YK++H VHHE+  PFG+ +EYAHP E L LG    +G  +   H++ LW W+ +R+LET++ H GY  P +  N IP Y G+  HD+HH       GNY+STF +   IFGTD  Y
Sbjct:  163 KRIYKYIHKVHHEFQAPFGMEAEYAHPLETLILGTGFFIGIVLLCDHVILLWAWVTIRLLETIDVHSGYDIPLNPLNLIPFYAGSRHHDFHHMNFI---GNYASTFTWWDRIFGTDSQY 278          
BLAST of CN186056 vs. ExPASy Swiss-Prot
Match: ERG25_MACFA (C-4 methylsterol oxidase OS=Macaca fascicularis GN=SC4MOL PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.104e-27
Identity = 54/119 (45.38%), Postives = 74/119 (62.18%), Query Frame = -1
Query:  389 KWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPAITGPHLMTLWLWMVLRVLETVEAHCGYHFPWSLSNFIPLYGGADFHDYHHRLLYTKSGNYSSTFVYIAWIFGTDKGY 745
            K +YK++H VHHE+  PFG+ +EYAHP E L LG    +G  +   H++ LW W+ +R+LET++ H GY  P +  N IP Y G+  HD+HH       GNY+STF +   IFGTD  Y
Sbjct:  163 KRIYKYIHKVHHEFQAPFGMEAEYAHPLETLILGTGFFIGIVLLCDHVILLWAWVTIRLLETIDVHSGYDIPLNPLNLIPFYAGSRHHDFHHMNFI---GNYASTFTWWDRIFGTDSQY 278          
BLAST of CN186056 vs. ExPASy Swiss-Prot
Match: ERG25_HUMAN (C-4 methylsterol oxidase OS=Homo sapiens GN=SC4MOL PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.104e-27
Identity = 54/119 (45.38%), Postives = 74/119 (62.18%), Query Frame = -1
Query:  389 KWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPAITGPHLMTLWLWMVLRVLETVEAHCGYHFPWSLSNFIPLYGGADFHDYHHRLLYTKSGNYSSTFVYIAWIFGTDKGY 745
            K +YK++H VHHE+  PFG+ +EYAHP E L LG    +G  +   H++ LW W+ +R+LET++ H GY  P +  N IP Y G+  HD+HH       GNY+STF +   IFGTD  Y
Sbjct:  163 KRIYKYIHKVHHEFQAPFGMEAEYAHPLETLILGTGFFIGIVLLCDHVILLWAWVTIRLLETIDVHSGYDIPLNPLNLIPFYAGSRHHDFHHMNFI---GNYASTFTWWDRIFGTDSQY 278          
BLAST of CN186056 vs. ExPASy Swiss-Prot
Match: ERG25_MOUSE (C-4 methylsterol oxidase OS=Mus musculus GN=Sc4mol PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.442e-27
Identity = 56/134 (41.79%), Postives = 80/134 (59.70%), Query Frame = -1
Query:  347 KWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPAITGPHLMTLWLWMVLRVLETVEAHCGYHFPWSLSNFIPLYGGADFHDYHHRLLYTKSGNYSSTFVYIAWIFGTDKGYRK-LKALKSFGIEDD 745
            K +YK++H VHHE+  PFG+ +EYAHP E L LG    +G  +   H++ LW W+ +R+LET++ H GY  P +  N +P Y GA  HD+HH       GNY+STF +   +FGTD  Y   ++  K  G + D
Sbjct:  163 KRIYKYIHKVHHEFQAPFGIEAEYAHPLETLILGTGFFIGIVLLCDHVILLWAWVTIRLLETIDVHSGYDIPLNPLNLVPFYTGARHHDFHHMNFI---GNYASTFTWWDKLFGTDAQYHAYIEKSKKLGKKSD 293          
BLAST of CN186056 vs. ExPASy Swiss-Prot
Match: ERG25_CHICK (C-4 methylsterol oxidase OS=Gallus gallus GN=SC4MOL PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.442e-27
Identity = 52/119 (43.70%), Postives = 76/119 (63.87%), Query Frame = -1
Query:  389 KWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPAITGPHLMTLWLWMVLRVLETVEAHCGYHFPWSLSNFIPLYGGADFHDYHHRLLYTKSGNYSSTFVYIAWIFGTDKGY 745
            K +YK++H VHHE+ +PFG+ +EYAHP E L LG    +G  +   H++ LW W++ R++ET++ H GY  P +  + +P Y GA FHD+HH       GNY+STF +   IFGTD  +
Sbjct:  163 KRIYKYIHKVHHEFVSPFGMQAEYAHPLETLILGAGFFIGIVVFCNHVVLLWAWVICRLMETIDVHSGYDIPLNPLHLVPFYAGARFHDFHHMNFI---GNYASTFTWWDRIFGTDSQF 278          
The following BLAST results are available for this feature:
BLAST of CN186056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
ER25A_DICDI1.102e-3555.36Putative C-4 methylsterol oxidase DDB_G0270946 OS=... [more]
ER25B_DICDI1.591e-3450.41Putative C-4 methylsterol oxidase DDB_G0269788 OS=... [more]
ERG25_SCHPO1.305e-2843.65C-4 methylsterol oxidase OS=Schizosaccharomyces po... [more]
ERG25_CANAL2.906e-2846.38C-4 methylsterol oxidase OS=Candida albicans GN=ER... [more]
ERG25_RAT6.474e-2846.22C-4 methylsterol oxidase OS=Rattus norvegicus GN=S... [more]
ERG25_PONAB1.104e-2745.38C-4 methylsterol oxidase OS=Pongo abelii GN=SC4MOL... [more]
ERG25_MACFA1.104e-2745.38C-4 methylsterol oxidase OS=Macaca fascicularis GN... [more]
ERG25_HUMAN1.104e-2745.38C-4 methylsterol oxidase OS=Homo sapiens GN=SC4MOL... [more]
ERG25_MOUSE1.442e-2741.79C-4 methylsterol oxidase OS=Mus musculus GN=Sc4mol... [more]
ERG25_CHICK1.442e-2743.70C-4 methylsterol oxidase OS=Gallus gallus GN=SC4MO... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002E19_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002E19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186056 ID=CN186056; Name=CN186056; organism=Citrus sinensis; type=EST; length=745bp
TTTTTTTTTTTTTTTTTGAGTTCCGGCNTTAAAATCATTAAGAAATCATG
GGAGTTTAAAAGGATCTACAGCATAACCCCATTTGTTGAAATATAGCACA
GGAATTTCACACTAACGCAAGAAACAAGAAGGTATTAAAAAAATATATCC
AAAGAAATCTTTCCGATGATTACAGATTACTACAAGCTGTAAACATTAAC
AGCAAGAAACAACTAAAAGGTGGTTTCACACAAGATGAGGCAGGGACAGA
CAAAACCTTTTCCAAGAAGCCCTTTAGCCAGGAACCCGATTTTCTAATTT
TGAATCTAACCAAAAAAAGAATTTTCTACCGTTACATCTGCTTGGGGTCA
TCTTCAATTCCAAAACTCTTTAGTGCTTTCAGCTTTCTGTAACCCTTATC
AGTACCAAATATCCAGGCGATGTAAACAAAAGTCGATGAATAATTGCCAG
ATTTGGTATAGAGCAAACGATGATGATAGTCATGAAAATCAGCACCCCCA
TACAAAGGTATAAAGTTTGAGAGGCTCCATGGGAAATGGTAACCACAATG
TGCCTCAACAGTCTCCAATACTCTGAGCACCATCCACAACCAGAGAGTCA
TCAAATGGGGCCCAGTGATGGCAGGACCGACAATGGTAGCAAAGCCAAGG
AACAGTATTTCAGCAGGGTGAGCATATTCAGATGTGAGCCCAAATGGTGT
TGCATATTCATGATGGACACTGTGAACGTGTTTGTACAACCATTT
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