CN186048

Overview
NameCN186048
Unique NameCN186048
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length716
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186048 vs. ExPASy Swiss-Prot
Match: MOSC1_HUMAN (MOSC domain-containing protein 1, mitochondrial OS=Homo sapiens GN=MOSC1 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.643e-17
Identity = 54/137 (39.42%), Postives = 77/137 (56.20%), Query Frame = -2
Query:  308 FSDGYPFMLLSQGSLDALNKLLKEPVPINRFRPNILVDGCEPFSEDTWTEVRINKFTFQGVKLCSRCKIPTINQDTG-DAGPEPNETLKQIRSDKVLRPGRKQRGKI-YFGQNMVCKDNLTEGNGKVLNLGDPVFVL 712
            +SD  PF++LS+ SL  LN  L++ V    FRPNI++ GC+ ++ED+W E+ I     + V  CSRC + T++ DTG  +  EP ETLK  R        RK  GK   FGQ  V +      N   + +GDPV++L
Sbjct:  207 YSDTSPFLILSEASLADLNSRLEKKVKATNFRPNIVISGCDVYAEDSWDELLIGDVELKRVMACSRCILTTVDPDTGVMSRKEPLETLKSYRQCDPSE--RKLYGKSPLFGQYFVLE------NPGTIKVGDPVYLL 335          
BLAST of CN186048 vs. ExPASy Swiss-Prot
Match: YCBX_ECOLI (Uncharacterized protein ycbX OS=Escherichia coli (strain K12) GN=ycbX PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.384e-16
Identity = 49/148 (33.11%), Postives = 76/148 (51.35%), Query Frame = -2
Query:  275 FSDGYPFMLLSQGSLDALNKLLKEPVPINRFRPNILVDGCEPFSEDTWTEVRINKFTFQGVKLCSRCKIPTINQDTGDAGP--EPNETLKQIRSDKVLRPGRKQRGKIYFGQNMVCKDNLTEGNGKVLNLGDPVFVLKKVTSAAEAAA 712
            F+DGYP++L ++ SL  L +     V + +FRPN++V G   + ED W  +RI    F  VK CSRC   T++ + G   P  EP +TL+  R+        +  G + FGQN++ +      N  V+ +GD V +L    +    AA
Sbjct:  141 FADGYPYLLANEASLRDLQQRCPASVKMEQFRPNLVVSGASAWEEDRWKVIRIGDVVFDVVKPCSRCIFTTVSPEKGQKHPAGEPLKTLQSFRT-------AQDNGDVDFGQNLIAR------NSGVIRVGDEVEILATAPAKIYGAA 275          
BLAST of CN186048 vs. ExPASy Swiss-Prot
Match: MOSC1_MOUSE (MOSC domain-containing protein 1, mitochondrial OS=Mus musculus GN=Mosc1 PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.808e-16
Identity = 53/141 (37.59%), Postives = 78/141 (55.32%), Query Frame = -2
Query:  308 FSDGYPFMLLSQGSLDALNKLLKEPVPINRFRPNILVDGCEPFSEDTWTEVRINKFTFQGVKLCSRCKIPTINQDTGDAG-PEPNETLKQIR----SDKVLRPGRKQRGKI-YFGQNMVCKDNLTEGNGKVLNLGDPVFVL 712
            +SD  PF++LS+ SL+ LN  L+  V    FRPNI++ GC  ++ED+W EV I     + V  C+RC + T++ DTG +   EP ETLK  R    S++ L       GK+  FGQ    +      N   + +GDPV++L
Sbjct:  210 YSDASPFLVLSEASLEDLNSRLERRVKATNFRPNIVISGCGVYAEDSWNEVLIGDVELKRVMACTRCLLTTVDPDTGISDRKEPLETLKSYRLCDPSEQAL------YGKLPIFGQYFALE------NPGTIRVGDPVYLL 338          
BLAST of CN186048 vs. ExPASy Swiss-Prot
Match: MOSC1_XENLA (MOSC domain-containing protein 1, mitochondrial OS=Xenopus laevis GN=mosc1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.611e-15
Identity = 49/135 (36.30%), Postives = 73/135 (54.07%), Query Frame = -2
Query:  314 FSDGYPFMLLSQGSLDALNKLLKEPVPINRFRPNILVDGCEPFSEDTWTEVRINKFTFQGVKLCSRCKIPTINQDTG-DAGPEPNETLKQIR-SDKVLRPGRKQRGKIYFGQNMVCKDNLTEGNGKVLNLGDPVF 712
            + D  P MLLS+ S++ALN  L++PV +  FRP I+  GCE F+ED W +VR+     + V  C RC + T+N ++G     EP +TL+  R SD  L+   K      FGQ    +         ++ +GDPV+
Sbjct:  211 YPDASPIMLLSETSMEALNSRLEQPVSLANFRPCIVASGCEAFAEDDWDDVRLGATRLKRVMACGRCVLTTVNPNSGVITRKEPLDTLRTFRQSDSSLKEVYKNAP--LFGQYYGVEQT------GIIRVGDPVY 337          
BLAST of CN186048 vs. ExPASy Swiss-Prot
Match: MOSC2_BOVIN (MOSC domain-containing protein 2, mitochondrial OS=Bos taurus GN=MOSC2 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.692e-14
Identity = 51/138 (36.96%), Postives = 70/138 (50.72%), Query Frame = -2
Query:  314 FSDGYPFMLLSQGSLDALNKLLKEPVPINRFRPNILVDGCEPFSEDTWTEVRINKFTFQGVKLCSRCKIPTINQDTGDAG-PEPNETLKQIR----SDKVLRPGRKQRGKIYFGQNMVCKDNLTEGNGKVLNLGDPVF 712
            + D  P M+LS+ SL  LN  +++ V IN FRPNI+V GC  F EDTW E+ I     + +  C RC + T++ DTG     EP ETLK  R    S+K +       G IY+    +            L +GDPV+
Sbjct:  206 YPDCSPVMILSEASLADLNTRMEKKVKINNFRPNIVVTGCSAFEEDTWDELLIGNVEMKKILACPRCIMTTVDPDTGVIDRKEPLETLKSYRLCDPSEKSIYKSSPLFG-IYYSVEKIGS----------LKVGDPVY 332          
BLAST of CN186048 vs. ExPASy Swiss-Prot
Match: MOSC2_MOUSE (MOSC domain-containing protein 2, mitochondrial OS=Mus musculus GN=Mosc2 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.097e-13
Identity = 42/92 (45.65%), Postives = 53/92 (57.61%), Query Frame = -2
Query:  440 FSDGYPFMLLSQGSLDALNKLLKEPVPINRFRPNILVDGCEPFSEDTWTEVRINKFTFQGVKLCSRCKIPTINQDTGDAG-PEPNETLKQIR 712
            + D  P  L+S+ SL  LN  LK+ V +  FRPNI+V GCE F EDTW E+ I     + V  C RC + T++ DTG     EP ETLK  R
Sbjct:  208 YPDCSPVHLISEASLVDLNTRLKKKVKMEYFRPNIVVSGCEAFEEDTWDELLIGDVEMKRVLSCPRCVLTTVDPDTGIIDRKEPLETLKSYR 299          
BLAST of CN186048 vs. ExPASy Swiss-Prot
Match: MOSC2_RAT (MOSC domain-containing protein 2, mitochondrial OS=Rattus norvegicus GN=Mosc2 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.444e-13
Identity = 41/92 (44.57%), Postives = 53/92 (57.61%), Query Frame = -2
Query:  440 FSDGYPFMLLSQGSLDALNKLLKEPVPINRFRPNILVDGCEPFSEDTWTEVRINKFTFQGVKLCSRCKIPTINQDTGDAG-PEPNETLKQIR 712
            + D  P  L+S+ SL  LN  L++ V +  FRPNI+V GCE F EDTW E+ I     + V  C RC + T++ DTG     EP ETLK  R
Sbjct:  208 YPDCSPIHLISEASLVDLNTRLQKKVKMEYFRPNIVVSGCEAFEEDTWDELLIGDVEMKRVLSCPRCVLTTVDPDTGIIDRKEPLETLKSYR 299          
BLAST of CN186048 vs. ExPASy Swiss-Prot
Match: MOSC1_DANRE (MOSC domain-containing protein 1, mitochondrial OS=Danio rerio GN=mosc1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.110e-13
Identity = 45/134 (33.58%), Postives = 70/134 (52.24%), Query Frame = -2
Query:  314 FSDGYPFMLLSQGSLDALNKLLKEPVPINRFRPNILVDGCEPFSEDTWTEVRINKFTFQGVKLCSRCKIPTINQDTG-DAGPEPNETLKQIRSDKVLRPGRKQRGKIYFGQNMVCKDNLTEGNGKVLNLGDPVF 712
            + D  P ML+++ S+  LN  L + + + +FRP+I+V  CE F+EDTW  +RI +   + V  C RC   T++ +TG  +  EP ETLK  R         KQ+     GQ    +         VL++G+PV+
Sbjct:  199 YPDAAPVMLMTEASVGDLNSRLDKDLSVFQFRPSIVVSDCEAFTEDTWDHIRIGEVELKRVIGCGRCLFTTVDPETGVFSRKEPLETLKTYR-----MTDPKQKTSPILGQYYTVRKT------GVLHVGEPVY 321          
BLAST of CN186048 vs. ExPASy Swiss-Prot
Match: MOSC2_MACFA (MOSC domain-containing protein 2, mitochondrial OS=Macaca fascicularis GN=MOSC2 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.861e-12
Identity = 34/92 (36.96%), Postives = 53/92 (57.61%), Query Frame = -2
Query:  440 FSDGYPFMLLSQGSLDALNKLLKEPVPINRFRPNILVDGCEPFSEDTWTEVRINKFTFQGVKLCSRCKIPTINQDTGDAG-PEPNETLKQIR 712
            + D  P ++++  SL  LN  +++ + +  FRPNI+V GC+ F EDTW E+ I     + +  C RC + T++ DTG     EP +TLK  R
Sbjct:  206 YPDCSPLLIMTDASLVDLNTRIEKKMKMENFRPNIVVTGCDAFEEDTWDELLIGSVEVKKIMACPRCILTTVDPDTGVIDRKEPLDTLKSYR 297          
BLAST of CN186048 vs. ExPASy Swiss-Prot
Match: MOSC2_HUMAN (MOSC domain-containing protein 2, mitochondrial OS=Homo sapiens GN=MOSC2 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.341e-11
Identity = 34/92 (36.96%), Postives = 53/92 (57.61%), Query Frame = -2
Query:  440 FSDGYPFMLLSQGSLDALNKLLKEPVPINRFRPNILVDGCEPFSEDTWTEVRINKFTFQGVKLCSRCKIPTINQDTGDAG-PEPNETLKQIR 712
            + D  P ++++  SL  LN  +++ + +  FRPNI+V GC+ F EDTW E+ I     + V  C RC + T++ DTG     +P +TLK  R
Sbjct:  206 YPDYCPLLIMTDASLVDLNTRMEKKMKMENFRPNIVVTGCDAFEEDTWDELLIGSVEVKKVMACPRCILTTVDPDTGVIDRKQPLDTLKSYR 297          
The following BLAST results are available for this feature:
BLAST of CN186048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
MOSC1_HUMAN3.643e-1739.42MOSC domain-containing protein 1, mitochondrial OS... [more]
YCBX_ECOLI1.384e-1633.11Uncharacterized protein ycbX OS=Escherichia coli (... [more]
MOSC1_MOUSE1.808e-1637.59MOSC domain-containing protein 1, mitochondrial OS... [more]
MOSC1_XENLA2.611e-1536.30MOSC domain-containing protein 1, mitochondrial OS... [more]
MOSC2_BOVIN1.692e-1436.96MOSC domain-containing protein 2, mitochondrial OS... [more]
MOSC2_MOUSE1.097e-1345.65MOSC domain-containing protein 2, mitochondrial OS... [more]
MOSC2_RAT2.444e-1344.57MOSC domain-containing protein 2, mitochondrial OS... [more]
MOSC1_DANRE7.110e-1333.58MOSC domain-containing protein 1, mitochondrial OS... [more]
MOSC2_MACFA7.861e-1236.96MOSC domain-containing protein 2, mitochondrial OS... [more]
MOSC2_HUMAN1.341e-1136.96MOSC domain-containing protein 2, mitochondrial OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002E15_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002E15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186048 ID=CN186048; Name=CN186048; organism=Citrus sinensis; type=EST; length=716bp
TTTTTTTTTTTTTTTTTGAAGAAAAAATTTATAAAGATTTTTCAATATAC
TCTAACATATCTTATTAGACGTATATCTTTTCTACTGTTCCACGTATAAT
GGTGATCTTTTATGAAAGTTTGAAAACCGTGTCATGCGTAGAGGTTGTTG
TAAGCCAATCAAAATAAAACCGAACCTTGCCATGGTCTAGCAAGCAAGCG
GTTTCTTATTGCATTAGACTTTGATACACAACAGAGTTTTATTTATTGCC
CCAACAAATATTCTGTAGAGTTCAAGCTGCTGCTTCAGCTGCAGAAGTGA
CCTTCTTCAGAACAAAAACAGGATCCCCAAGATTAAGCACCTTTCCGTTT
CCTTCAGTAAGGTTATCCTTGCACACCATGTTCTGCCCAAAGTATATCTT
TCCCCGCTGTTTTCGACCTGGACGCAAAACTTTATCTGATCTAATCTGCT
TTAGAGTCTCATTTGGTTCAGGACCGGCATCGCCAGTGTCTTGATTGATT
GTTGGAATCTTACAGCGGGAGCACAGCTTAACACCTTGAAACGTGAACTT
GTTTATTCGGACCTCGGTCCATGTGTCCTCAGAAAACGGTTCACAACCAT
CAACAAGGATGTTGGGCCGAAAACGGTTAATTGGAACAGGCTCCTTGAGA
AGCTTATTTAGTGCGTCCAAAGATCCCTGAGACAATAACATAAATGGATA
CCCATCAGAAAACCCT
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