CN186032

Overview
NameCN186032
Unique NameCN186032
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2518 contig Csv1_Contig2518:1..786. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186032 vs. ExPASy Swiss-Prot
Match: ERO2_ARATH (Endoplasmic oxidoreductin-2 OS=Arabidopsis thaliana GN=AERO2 PE=1 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.392e-60
Identity = 113/167 (67.66%), Postives = 141/167 (84.43%), Query Frame = -3
Query:  284 EYETGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQGQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSVNGEEHLSQTLQLQRNEVIALMNILNRLSESVKLVHEMGPAAEKVVEGQNSSPTAFSRLLEKMQASIL*VKLLQGK 784
            EYETGN +EDLKT+SL+KQ++ +P+ +AACP+PFDEAKLWKGQRGPELKQ+++ QFRNISA+MDCVGCEKCRLWGKLQ+LGLGTALKILF+VNGE++L   L+LQRNEVIALMN+L+RLSESVK VH+M PAAE++  G  SS  +F    +++  SI   K + GK
Sbjct:  307 EYETGNVIEDLKTKSLVKQVVSDPKTKAACPVPFDEAKLWKGQRGPELKQQLEKQFRNISAIMDCVGCEKCRLWGKLQILGLGTALKILFTVNGEDNLRHNLELQRNEVIALMNLLHRLSESVKYVHDMSPAAERIAGGHASSGNSF---WQRIVTSIAQSKAVSGK 470          
BLAST of CN186032 vs. ExPASy Swiss-Prot
Match: ERO1_ARATH (Endoplasmic oxidoreductin-1 OS=Arabidopsis thaliana GN=AERO1 PE=1 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.313e-58
Identity = 110/146 (75.34%), Postives = 128/146 (87.67%), Query Frame = -3
Query:  347 EYETGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQGQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSVNGEEHLSQTLQLQRNEVIALMNILNRLSESVKLVHEMGPAAEKVVEGQNSSPTA 784
            EY+TGN  EDLKTQSL+KQLLY+P+LQ ACP+PFDEAKLW+GQ GPELKQ+IQ QFRNISALMDCVGCEKCRLWGKLQV GLGTALKILFSV  ++   QTLQLQRNEVIAL+N+LNRLSESVK+VH+M P  E+++E Q +  +A
Sbjct:  308 EYDTGNHAEDLKTQSLIKQLLYSPKLQTACPVPFDEAKLWQGQSGPELKQQIQKQFRNISALMDCVGCEKCRLWGKLQVQGLGTALKILFSVGNQDIGDQTLQLQRNEVIALVNLLNRLSESVKMVHDMSPDVERLMEDQIAKVSA 453          
BLAST of CN186032 vs. ExPASy Swiss-Prot
Match: ERO1A_XENTR (ERO1-like protein alpha OS=Xenopus tropicalis GN=ero1l PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.371e-23
Identity = 65/140 (46.43%), Postives = 85/140 (60.71%), Query Frame = -3
Query:  377 TGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQR--GPELKQKIQGQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSVNGEEHLSQTLQ-----LQRNEVIALMNILNRLSESVKLVHEMGPAAEKV 775
            TGN  +D +T+ L+  +L + +     PL FDE  L+ G +    +LK+  +  FRNIS +MDCVGC KCRLWGKLQ  GLGTALKILFS    E+LS++ Q     L R E++AL N   R+S SVK +       EKV
Sbjct:  338 TGNETKDTETKKLLLDVLLDAR---DFPLHFDENSLFSGDKKEAAKLKEDFRQHFRNISKIMDCVGCFKCRLWGKLQTQGLGTALKILFSERQIENLSESNQPSEFHLTRQEIVALFNAFARISTSVKELENFRTLLEKV 474          
BLAST of CN186032 vs. ExPASy Swiss-Prot
Match: ERO1_NEUCR (Endoplasmic oxidoreductin-1 OS=Neurospora crassa GN=ero-1 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.054e-23
Identity = 62/145 (42.76%), Postives = 83/145 (57.24%), Query Frame = -3
Query:  365 TGNPMEDLKTQSLMKQLLYNPQLQAACPLP-FDEAKLWKGQRGPELKQKIQGQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILF-------SVNGEEHLSQTLQLQRNEVIALMNILNRLSESVKLVHEMGPAAEKVVEGQ 775
            TG+P +D  T++  K L    +     P P FDE+ ++K   GP LK+  + +FRNIS LMDCVGC+KCRLWGKLQ  G GTALK+LF       S    E      +L+R E++AL N   RLS S+  + +     E+  EGQ
Sbjct:  353 TGDPAQDADTRA--KVLAVTSKAANTVPGPVFDESIMFKNGEGPSLKEDFRNRFRNISRLMDCVGCDKCRLWGKLQTAGYGTALKVLFEFANNDTSATSSETDEIPFKLKRTELVALFNTYARLSSSLDAIQKFRAMVEESEEGQ 495          
BLAST of CN186032 vs. ExPASy Swiss-Prot
Match: ERO1A_XENLA (ERO1-like protein alpha OS=Xenopus laevis GN=ero1l PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.209e-23
Identity = 63/140 (45.00%), Postives = 85/140 (60.71%), Query Frame = -3
Query:  377 TGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQR--GPELKQKIQGQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSVNGEEHLSQTLQ-----LQRNEVIALMNILNRLSESVKLVHEMGPAAEKV 775
            TGN  +D +T+ ++  +L + +     PL FDE  L+ G +    +LK+  +  FRNIS +MDCVGC KCRLWGKLQ  GLGTALKILFS    E+LS++ Q     L R E++AL N   R+S SV+ +       EKV
Sbjct:  329 TGNETKDKETKKILLDVLQDAR---DFPLHFDENSLFSGDKKEAAKLKEDFRQHFRNISKIMDCVGCFKCRLWGKLQTQGLGTALKILFSEKQIENLSESNQPSAFHLTRQEIVALFNAFGRISTSVQELENFRKLLEKV 465          
BLAST of CN186032 vs. ExPASy Swiss-Prot
Match: ERO1B_HUMAN (ERO1-like protein beta OS=Homo sapiens GN=ERO1LB PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 3.377e-22
Identity = 57/128 (44.53%), Postives = 81/128 (63.28%), Query Frame = -3
Query:  413 TGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQR--GPELKQKIQGQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSVNGEEHL-----SQTLQLQRNEVIALMNILNRLSESVK 775
            TGN  ED  T++L+  +  + +   + P+ FDE  ++ G +     LK++ +  F+NIS +MDCVGC+KCRLWGKLQ  GLGTALKILFS    + L     S+  QL R E++AL+N   RLS S++
Sbjct:  330 TGNAEEDADTKTLLLNIFQDTK---SFPMHFDEKSMFAGDKKGAKSLKEEFRLHFKNISRIMDCVGCDKCRLWGKLQTQGLGTALKILFSEKEIQKLPENSPSKGFQLTRQEIVALLNAFGRLSTSIR 454          
BLAST of CN186032 vs. ExPASy Swiss-Prot
Match: ERO1B_MOUSE (ERO1-like protein beta OS=Mus musculus GN=Ero1lb PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.760e-22
Identity = 56/128 (43.75%), Postives = 82/128 (64.06%), Query Frame = -3
Query:  413 TGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQR--GPELKQKIQGQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSVNGEEHL-----SQTLQLQRNEVIALMNILNRLSESVK 775
            TGN  +D  T++L+  +  + +   + P+ FDE  ++ G +     LK++ +  F+NIS +MDCVGC+KCRLWGKLQ  GLGTALKILFS    ++L     S+  QL R E++AL+N   RLS S++
Sbjct:  330 TGNVEDDADTKTLLLSIFQDTK---SFPMHFDEKSMFAGDKKGAKSLKEEFRLHFKNISRIMDCVGCDKCRLWGKLQTQGLGTALKILFSEKEIQNLPENSPSKGFQLTRQEIVALLNAFGRLSTSIR 454          
BLAST of CN186032 vs. ExPASy Swiss-Prot
Match: ERO1A_RAT (ERO1-like protein alpha OS=Rattus norvegicus GN=Ero1l PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.859e-21
Identity = 57/128 (44.53%), Postives = 79/128 (61.72%), Query Frame = -3
Query:  413 TGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGP--ELKQKIQGQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSVN-----GEEHLSQTLQLQRNEVIALMNILNRLSESVK 775
            TGN ++D++ + L+ ++L+  +   + PL FDE   + G +    +LK+  +  FRNIS +MDCVGC KCRLWGKLQ  GLGTALKILFS        E   S   QL R E+++L N   R+S SV+
Sbjct:  327 TGNKVQDVENKELLLEILHEVK---SFPLHFDENSFFAGDKNEAHKLKEDFRLHFRNISRIMDCVGCFKCRLWGKLQTQGLGTALKILFSEKLIANMPESGPSYEFQLTRQEIVSLFNAFGRISTSVR 451          
BLAST of CN186032 vs. ExPASy Swiss-Prot
Match: ERO1A_MOUSE (ERO1-like protein alpha OS=Mus musculus GN=Ero1l PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 4.876e-21
Identity = 57/128 (44.53%), Postives = 79/128 (61.72%), Query Frame = -3
Query:  413 TGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGP--ELKQKIQGQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSVN-----GEEHLSQTLQLQRNEVIALMNILNRLSESVK 775
            TGN ++D + ++L+ ++L+  +   + PL FDE   + G +    +LK+  +  FRNIS +MDCVGC KCRLWGKLQ  GLGTALKILFS        E   S   QL R E+++L N   R+S SV+
Sbjct:  327 TGNKVQDAENKALLLEILHEIK---SFPLHFDENSFFAGDKNEAHKLKEDFRLHFRNISRIMDCVGCFKCRLWGKLQTQGLGTALKILFSEKLIANMPESGPSYEFQLTRQEIVSLFNAFGRISTSVR 451          
BLAST of CN186032 vs. ExPASy Swiss-Prot
Match: ERO1A_PIG (ERO1-like protein alpha OS=Sus scrofa GN=ERO1L PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.160e-20
Identity = 57/128 (44.53%), Postives = 76/128 (59.38%), Query Frame = -3
Query:  413 TGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQR--GPELKQKIQGQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSVN-----GEEHLSQTLQLQRNEVIALMNILNRLSESVK 775
            TGN ++D + + L+  +L+  +   + PL FDE   + G +    +LK+  +  FRNIS +MDCVGC KCRLWGKLQ  GLGTALKILFS        E   S    L R E+++L N   R+S SVK
Sbjct:  331 TGNKVQDAENKMLLLDILHEIK---SFPLHFDENSFFAGDKKEANKLKEDFRLHFRNISRIMDCVGCLKCRLWGKLQTQGLGTALKILFSEKLIANMPESGPSYEFHLTRQEIVSLFNAFGRISTSVK 455          
The following BLAST results are available for this feature:
BLAST of CN186032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
ERO2_ARATH2.392e-6067.66Endoplasmic oxidoreductin-2 OS=Arabidopsis thalian... [more]
ERO1_ARATH1.313e-5875.34Endoplasmic oxidoreductin-1 OS=Arabidopsis thalian... [more]
ERO1A_XENTR1.371e-2346.43ERO1-like protein alpha OS=Xenopus tropicalis GN=e... [more]
ERO1_NEUCR3.054e-2342.76Endoplasmic oxidoreductin-1 OS=Neurospora crassa G... [more]
ERO1A_XENLA5.209e-2345.00ERO1-like protein alpha OS=Xenopus laevis GN=ero1l... [more]
ERO1B_HUMAN3.377e-2244.53ERO1-like protein beta OS=Homo sapiens GN=ERO1LB P... [more]
ERO1B_MOUSE5.760e-2243.75ERO1-like protein beta OS=Mus musculus GN=Ero1lb P... [more]
ERO1A_RAT2.859e-2144.53ERO1-like protein alpha OS=Rattus norvegicus GN=Er... [more]
ERO1A_MOUSE4.876e-2144.53ERO1-like protein alpha OS=Mus musculus GN=Ero1l P... [more]
ERO1A_PIG3.160e-2044.53ERO1-like protein alpha OS=Sus scrofa GN=ERO1L PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002E05_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186032 ID=CN186032; Name=CN186032; organism=Citrus sinensis; type=EST; length=786bp
TTTTTTTTCATCATTGTACGAATTTTATTTACTTTTGATTCTTGAATCCT
AATGACTGGATATCATGTTGATCGAATTTTGAGTTATCCAGTTGGTCTTC
TACCGTTTCCAGTTCTTACAAGAACAGAGCAATTTAAACAAGCAATTTTC
AAAAAGTTAAAACAATTTACTATTTTCTGTAAAACATCCTGCCGGAATTA
TTGCTCCAAACTTCCAGTTACATGTTTGCAGTTTGCTGAATCAACAAACT
GAATGTCCTCTGATTGTTTGGTCCACAGTAGCACTTTCCCTGTAATAATT
TAACCTATAATATTGAAGCCTGCATCTTTTCCAGTAGTCTACTAAAAGCA
GTAGGTGAAGAATTCTGCCCTTCCACAACCTTTTCCGCGGCAGGTCCCAT
TTCATGGACAAGTTTAACAGATTCTGATAGTCGATTGAGGATATTCATCA
AGGCAATCACTTCATTCCGTTGCAGCTGCAGAGTTTGACTCAAGTGTTCC
TCACCATTGACAGAGAAGAGGATTTTCAATGCAGTACCAAGACCAAGAAC
CTGAAGCTTCCCCCAAAGTCGACACTTCTCACAACCAACACAATCCATCA
GTGCGCTAATGTTTCTAAATTGTCCCTGAATTTTCTGTTTCAGTTCAGGT
CCCCGCTGGCCTTTCCATAACTTAGCCTCATCAAAGGGGAGTGGGCATGC
AGCTTGCAGTTGTGGATTATAGAGAAGCTGTTTCATTAAGGACTGTGTCT
TCAGGTCCTCCATAGGGTTACCAGTTTCATATTCAG
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