CN186013

Overview
NameCN186013
Unique NameCN186013
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK_BRARP (S-adenosylmethionine synthetase OS=Brassica rapa subsp. pekinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.675e-19
Identity = 45/53 (84.91%), Postives = 50/53 (94.34%), Query Frame = -3 
Query:  152 METFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 307
            METFLFTSESVNEG+PDKLCD ISDA+LDACLEQDPD K+ACETCTK ++VMV
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMV 53
[Close]
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK5_BRAJU (S-adenosylmethionine synthetase 5 OS=Brassica juncea GN=MSAMS5 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.675e-19
Identity = 45/53 (84.91%), Postives = 50/53 (94.34%), Query Frame = -3 
Query:  152 METFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 307
            METFLFTSESVNEG+PDKLCD ISDA+LDACLEQDPD K+ACETCTK ++VMV
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMV 53
[Close]
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK3_BRAJU (S-adenosylmethionine synthetase 3 OS=Brassica juncea GN=MSAMS3 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.675e-19
Identity = 45/53 (84.91%), Postives = 50/53 (94.34%), Query Frame = -3 
Query:  152 METFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 307
            METFLFTSESVNEG+PDKLCD ISDA+LDACLEQDPD K+ACETCTK ++VMV
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMV 53
[Close]
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK2_POPTR (S-adenosylmethionine synthetase 2 OS=Populus trichocarpa GN=METK2 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.675e-19
Identity = 45/53 (84.91%), Postives = 50/53 (94.34%), Query Frame = -3 
Query:  152 METFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 307
            METFLFTSESVNEG+PDKLCD +SDAILDACLEQDPD K+ACETCTK ++VMV
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPDSKVACETCTKTNMVMV 53
[Close]
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK2_ARATH (S-adenosylmethionine synthetase 2 OS=Arabidopsis thaliana GN=SAM2 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.675e-19
Identity = 45/53 (84.91%), Postives = 50/53 (94.34%), Query Frame = -3 
Query:  152 METFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 307
            METFLFTSESVNEG+PDKLCD ISDA+LDACLEQDPD K+ACETCTK ++VMV
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMV 53
[Close]
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK1_POPTR (S-adenosylmethionine synthetase 1 OS=Populus trichocarpa GN=METK1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.675e-19
Identity = 45/53 (84.91%), Postives = 50/53 (94.34%), Query Frame = -3 
Query:  152 METFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 307
            METFLFTSESVNEG+PDKLCD ISDA+LDACLEQDPD K+ACETCTK ++VMV
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMV 53
[Close]
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK1_CATRO (S-adenosylmethionine synthetase 1 OS=Catharanthus roseus GN=SAMS1 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.675e-19
Identity = 45/53 (84.91%), Postives = 50/53 (94.34%), Query Frame = -3 
Query:  152 METFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 307
            METFLFTSESVNEG+PDKLCD ISDA+LDACLEQDPD K+ACETCTK ++VMV
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMV 53
[Close]
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK1_BRAJU (S-adenosylmethionine synthetase 1 OS=Brassica juncea GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.675e-19
Identity = 45/53 (84.91%), Postives = 50/53 (94.34%), Query Frame = -3 
Query:  152 METFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 307
            METFLFTSESVNEG+PDKLCD ISDA+LDACLEQDPD K+ACETCTK ++VMV
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMV 53
[Close]
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK1_ARATH (S-adenosylmethionine synthetase 1 OS=Arabidopsis thaliana GN=SAM1 PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.675e-19
Identity = 45/53 (84.91%), Postives = 50/53 (94.34%), Query Frame = -3 
Query:  152 METFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 307
            METFLFTSESVNEG+PDKLCD ISDA+LDACLEQDPD K+ACETCTK ++VMV
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMV 53
[Close]
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK_SOLBR (S-adenosylmethionine synthetase OS=Solanum brevidens GN=SAMS PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.564e-19
Identity = 45/53 (84.91%), Postives = 50/53 (94.34%), Query Frame = -3 
Query:  152 METFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 307
            METFLFTSESVNEG+PDKLCD ISDA+LDACLEQDP+ K+ACETCTK +LVMV
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLVMV 53
The following BLAST results are available for this feature:
BLAST of CN186013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
METK_BRARP2.675e-1984.91S-adenosylmethionine synthetase OS=Brassica rapa s... [more]
METK5_BRAJU2.675e-1984.91S-adenosylmethionine synthetase 5 OS=Brassica junc... [more]
METK3_BRAJU2.675e-1984.91S-adenosylmethionine synthetase 3 OS=Brassica junc... [more]
METK2_POPTR2.675e-1984.91S-adenosylmethionine synthetase 2 OS=Populus trich... [more]
METK2_ARATH2.675e-1984.91S-adenosylmethionine synthetase 2 OS=Arabidopsis t... [more]
METK1_POPTR2.675e-1984.91S-adenosylmethionine synthetase 1 OS=Populus trich... [more]
METK1_CATRO2.675e-1984.91S-adenosylmethionine synthetase 1 OS=Catharanthus ... [more]
METK1_BRAJU2.675e-1984.91S-adenosylmethionine synthetase 1 OS=Brassica junc... [more]
METK1_ARATH2.675e-1984.91S-adenosylmethionine synthetase 1 OS=Arabidopsis t... [more]
METK_SOLBR4.564e-1984.91S-adenosylmethionine synthetase OS=Solanum brevide... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002D17_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002D17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186013 ID=CN186013; Name=CN186013; organism=Citrus sinensis; type=EST; length=786bp
TTTTTTTTTTTTTTTTGAATTTACACTTCTATTAACTACCAAGTCCCATT
TATACTCTACACACATAATATTAATAAACTATATATGAATAAACAAACAT
AAAATCCTCAAATCAAAAGCAATTCTCGGCCGCAATATACAATAGCAATA
CAACCATAACCAAGTCTTTGGTACAGGTTTCACAAGCCAACTTCCTATCT
GGGTCTTGTTCGAGACAAGCATCGAGAATGGCATCGGAGATATGATCACA
GAGCTTGTCTGGATAACCCTCGTTCACAGATTCTGAAGTGAACAAAAAAG
TCTCCATTTTTTCTTCAAAAACTGTAGACTGCGGCACCAAAGATGACTGC
GTGTGAGGGGCTAACGATGGCGTCACTGTGCTTGAGGGGAGGGGCTGTGC
TAGGAGGCCGTGCACGTGAGGAAGAGAGGGGCTAAGCTGACACGAGGGAG
AGACATGCTCACAAGGAAGAAACTGAGAGGGGCTGAGCTGAAGTTCTGCG
TCGTGTGGAGAGGGAGAAACGCGAGGCTGAGAGGTGAGGGGGAGAGGCGT
GGGAAACAACCGCTTCAAGTTTTAAATTAACAGCATCAAACTAACCCAAC
AAAACTAAAACAAATATTCTCATACTGGGTAAAGTTCCATCAAGTGCAGC
AAAGTAAAAAGCATACAAACAAAAATAAAGGCATTTAGAAAAGAGATGTT
CCCTTTCCCTTCTTGTCTCCACCAATTTCAAAGTGCTTGCACCTCTTGAT
GGGATGTTGAGACACATGCTTGCAACCCTGGCATTG
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