CN186001
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186001 vs. ExPASy Swiss-Prot
Match: CLPT1_BOVIN (Cleft lip and palate transmembrane protein 1 homolog OS=Bos taurus GN=CLPTM1 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.943e-21 Identity = 67/200 (33.50%), Postives = 105/200 (52.50%), Query Frame = 2 Query: 224 ITGVI-RIAVFWYFASKFF---APKRPAGPESAQLMS--NLFQRGEYLDMWLYVSEHEKFNDFGNEGALIWHETNMPYAVWSRESTRTLSLKYYP----TEALKNNGSLYVHVFFARSGYPPDPNDPE-YQPLAVFGKTHSIVVYYPKSKADKRRSLLRNPKDSEEAQPLVQAVDDPQGDSEDDGPVEWISFWKPNITIN 790 I GV+ RI + W +S F AP+ AGP A ++ NLF + +++ +Y+SEHE F DF AL W + ++ Y W+ +++ ++++ NGS+Y+HV+F +SG+ PDP Y+ LA + ++ Y + + K ++LL EA P + +ED GPVE IS W PNITIN Sbjct: 56 IKGVLFRIFIIWAISSWFRRGPAPQDQAGPGGAPRVASRNLFPKDTLMNLHVYISEHEHFTDFNATSALFWEQQDLVYGDWTSGENSDGCYEHFAELDIPQSVQQNGSIYIHVYFTKSGFHPDPRQKALYRRLATVHMSR-MINKYKRRRFQKTKNLLTG---ETEADP------EMIKRAEDYGPVEVISHWHPNITIN 245
BLAST of CN186001 vs. ExPASy Swiss-Prot
Match: CLPT1_HUMAN (Cleft lip and palate transmembrane protein 1 OS=Homo sapiens GN=CLPTM1 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.455e-21 Identity = 67/200 (33.50%), Postives = 105/200 (52.50%), Query Frame = 2 Query: 224 ITGVI-RIAVFWYFASKFF---APKRPAGPESAQLMS--NLFQRGEYLDMWLYVSEHEKFNDFGNEGALIWHETNMPYAVWSRESTRTLSLKYYP----TEALKNNGSLYVHVFFARSGYPPDPNDPE-YQPLAVFGKTHSIVVYYPKSKADKRRSLLRNPKDSEEAQPLVQAVDDPQGDSEDDGPVEWISFWKPNITIN 790 I GV+ RI + W +S F AP+ AGP A ++ NLF + +++ +Y+SEHE F DF AL W + ++ Y W+ +++ ++++ NGS+Y+HV+F +SG+ PDP Y+ LA + ++ Y + + K ++LL EA P + +ED GPVE IS W PNITIN Sbjct: 56 IKGVLFRIFIIWAISSWFRRGPAPQDQAGPGGAPRVASRNLFPKDTLMNLHVYISEHEHFTDFNATSALFWEQHDLVYGDWTSGENSDGCYEHFAELDIPQSVQQNGSIYIHVYFTKSGFHPDPRQKALYRRLATVHMSR-MINKYKRRRFQKTKNLLTG---ETEADP------EMIKRAEDYGPVEVISHWHPNITIN 245
BLAST of CN186001 vs. ExPASy Swiss-Prot
Match: CLPT1_DANRE (Cleft lip and palate transmembrane protein 1 homolog OS=Danio rerio GN=clptm1 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.453e-20 Identity = 66/201 (32.84%), Postives = 103/201 (51.24%), Query Frame = 2 Query: 224 ITGVI-RIAVFWYFASKFFA------PKRPAGPESAQLMSNLFQRGEYLDMWLYVSEHEKFNDFGNEGALIWHETNMPYAVWSRESTRTLSLKYYP----TEALKNNGSLYVHVFFARSGYPPDP-NDPEYQPLAVFGKTHSIVVYYPKSKADKRRSLLRNPKDSEEAQPLVQAVDDPQGDSEDDGPVEWISFWKPNITIN 790 I GV+ RI + W +S F P PAG NLF + +D+++Y+S+ E F DF N L W++ ++ Y W+ + +YY +E++K NGS+Y+H++F +SG+ PDP +Y+ L+ T ++ Y + K K ++LL EA P + +E GPVE IS W PN+TIN Sbjct: 54 IKGVLFRIFIIWAISSWFRRGPSTPDPNTPAGAPRVP-SRNLFPKDTLMDLYVYISQSEIFTDFNNTEELFWYQQDLVYGEWTTGDSGDGCYEYYKELDLSESVKQNGSIYMHIYFTKSGFHPDPKRKGQYRRLSTVHATR-MLNKYKRRKFLKTKNLLTG---ETEADP------EMIKRAESHGPVEIISHWHPNLTIN 243
BLAST of CN186001 vs. ExPASy Swiss-Prot
Match: CLPT1_MOUSE (Cleft lip and palate transmembrane protein 1 homolog OS=Mus musculus GN=Clptm1 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.204e-20 Identity = 65/200 (32.50%), Postives = 105/200 (52.50%), Query Frame = 2 Query: 224 ITGVI-RIAVFWYFASKFF---APKRPAGPESAQLMS--NLFQRGEYLDMWLYVSEHEKFNDFGNEGALIWHETNMPYAVWSRESTRTLSLKYYP----TEALKNNGSLYVHVFFARSGYPPDPNDPE-YQPLAVFGKTHSIVVYYPKSKADKRRSLLRNPKDSEEAQPLVQAVDDPQGDSEDDGPVEWISFWKPNITIN 790 I GV+ RI + W +S F +P+ +GP A ++ NLF + +++ +Y+SEHE F DF AL W + ++ Y W+ +++ ++++ NGS+Y+HV+F +SG+ PDP Y+ LA + ++ Y + + K ++LL EA P + +ED GPVE IS W PNITIN Sbjct: 56 IKGVLFRIFIIWAISSWFRRGPSPQDQSGPGGAPRVASRNLFPKDTLMNLHVYISEHEHFTDFNATSALFWEQHDLVYGDWTSGENSDGCYEHFAELDIPQSVQQNGSIYIHVYFTKSGFHPDPRQKALYRRLATVHMSR-MINKYKRRRFQKTKNLLTG---ETEADP------EMIKRAEDYGPVEVISHWHPNITIN 245 The following BLAST results are available for this feature:
BLAST of CN186001 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186001 ID=CN186001; Name=CN186001; organism=Citrus sinensis; type=EST; length=792bpback to top |