DC900124
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900124 vs. ExPASy Swiss-Prot
Match: C3H41_ARATH (Zinc finger CCCH domain-containing protein 41 OS=Arabidopsis thaliana GN=At3g27700 PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.551e-29 Identity = 88/251 (35.06%), Postives = 120/251 (47.81%), Query Frame = 1 Query: 1 VMGHRFIKLWWANRDSIPDDGISSGVNVSVTSHGMTAASVPAHTSVANKVXDNHLQSTTLKGGNIVPAADVSLPAPDHPTVITNSXXXXXXXXXXXDNXXXXXXXXXXXXXXXXXXXNDFRRQLDKLEKQAG-GKSDVVSEKAAKRLKVGIAADVAKATARSSDSTAAVASPRAEMMADKNKLVDIVLSPSQKVNTAMVLQESTSFKQQIRPLAPAGPPFLMNRYKLDNRPTAFRIMPPLPXGFADVAVLK 750 VMG+RFIKLWWANRDSIPD+G+S+G S+ MTA+ +A NH+ S A S P V T+ D N++R++L LEKQ K + E AKR+K+ A SDS AA+ASP+ E DK + LS + K++T +S +FKQ+ + ++NRYKLDNR T +++PPLP G ADVAV+K Sbjct: 497 VMGNRFIKLWWANRDSIPDNGLSTGSGASMKGRSMTASGAQNQFPIAAASKSNHVSSIAKVPTFQTGGAPSSSEQPKPVVVTTSGPKVTPLQQKKADTLERLKETLRKKQEMLEQKRNEYRKKLATLEKQGTVVKREEADEPDAKRVKLDTA----------SDSGAAIASPKTESSTDKKVPILKPLS-TAKLSTETPSPDSKNFKQRPYSFTTSLNAPMVNRYKLDNRTTTIKVVPPLPTGLADVAVVK 736
BLAST of DC900124 vs. ExPASy Swiss-Prot
Match: C3H27_ORYSJ (Zinc finger CCCH domain-containing protein 27 OS=Oryza sativa subsp. japonica GN=Os04g0394300 PE=2 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 4.269e-19 Identity = 86/253 (33.99%), Postives = 122/253 (48.22%), Query Frame = 1 Query: 1 VMGHRFIKLWWANRDSIPDDGISSGVNVSVTSHGMTAA---SVPAHTSVANKVXDNHLQSTTLKGGNIVPAADVSLPAPDHPTVITNSXXXXXXXXXXXDNXXXXXXXXXXXXXXXXXXXNDFRRQLDKLEKQAGGKSDVVSEKAAKRLKVGIAADVAKATARSSDSTAAVASPRAEMMADKNKLVDIVLSPSQKVNTAMVLQESTSFKQQIRPLAPAGPPFLMNRYKLDNRPTAFRIMPPLPXGFADVAVLK 750 VMG+RFIKLWWANRD IPD+ G + +SH M+AA SVP +S +N+ +N LQS T + + +A+ S P H + NS ++ ++FRRQL+KL KQ G + +A K + DV + T S +T PR +N+ + S S K + + + + KQ L P+ NR+KLDNR T+FRI+PPLP AD +VLK Sbjct: 518 VMGNRFIKLWWANRDRIPDE--VEGRIPAKSSH-MSAALANSVPQPSS-SNRGKEN-LQSATPRASS-GSSAEASGPGTGHKMLPANSVKSLPPDTKRQESLELLEELRKKQEILAQKR-DEFRRQLEKLAKQKGLANSAKQAEAGG--KEVASNDVHRVTDSKSMNTGT-EGPRDAAGTLQNRTSGELASSSHKSSATSAQKPAVATKQTSPLLVPS-----QNRFKLDNRTTSFRILPPLPPEIADESVLK 755 The following BLAST results are available for this feature:
BLAST of DC900124 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900124 ID=DC900124; Name=DC900124; organism=Citrus sinensis; type=EST; length=751bpback to top |