CN185999

Overview
NameCN185999
Unique NameCN185999
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length397
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN185999 vs. ExPASy Swiss-Prot
Match: DCE_PETHY (Glutamate decarboxylase OS=Petunia hybrida GN=GAD PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.491e-11
Identity = 39/73 (53.42%), Postives = 49/73 (67.12%), Query Frame = -2 
Query:  199 IRKEFSCTLAERFVLDITKVLHELDSLPSKV---LVPASEQNGRNG----KKTEIEIQREVTT*WNKFLSPRK 396
            IR++FS TLAER V DI KVLHELD+LP++V   L  A EQ   NG    KKT+ E+Q E+ T W KF+  +K
Sbjct:  421 IREDFSRTLAERLVRDIEKVLHELDTLPARVNAKLAVAEEQAAANGSEVHKKTDSEVQLEMITAWKKFVEEKK 493
The following BLAST results are available for this feature:
BLAST of CN185999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DCE_PETHY1.491e-1153.42Glutamate decarboxylase OS=Petunia hybrida GN=GAD ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0002D08_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185999 ID=CN185999; Name=CN185999; organism=Citrus sinensis; type=EST; length=397bp
TTTTTGATGACTTTGATTTANAAATGGTCTTAACAGTTAACAATAGGTGC
CATAAAAAATACAAATAATCAAAATCGTCAACATGCTACACCCCTTACAG
TTTCATATACCAAAAATAAAATGTAAAATACTAAAATTCAAAAAATGAAA
AGGGGGGGGGGGGGGTGTGTNTTAANTAATTTTATTNTTGTTATTATNTT
TGCGGGGGGAGAGAAATTTATTCCATTAAGTAGTGACTTCCCTCTGAATC
TCAATTTCAGTCTTCTTTCCATTCCTTCCATTCTGTTCAGAAGCAGGTAC
AAGCACTTTTGAAGGAAGCGAATCAAGCTCATGAAGCACTTTTGTGATGT
CGAGCACAAAGCGCTCGGCAAGTGTGCAAGAGAATTCTTTCCTGATG
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