CN185996

Overview
NameCN185996
Unique NameCN185996
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length747
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:570..1317. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALF_MAIZE (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Zea mays PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.473e-37
Identity = 78/87 (89.66%), Postives = 80/87 (91.95%), Query Frame = 3
Query:  486 MSCFKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGK 746
            MS + GKY DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVE NRRALRELLFC PGALQY+SGVILFEETLYQKT  GK
Sbjct:    1 MSAYCGKYKDELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEENRRALRELLFCCPGALQYISGVILFEETLYQKTKDGK 87          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALF_ORYSJ (Fructose-bisphosphate aldolase cytoplasmic isozyme OS=Oryza sativa subsp. japonica GN=FBA PE=1 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 7.630e-37
Identity = 77/87 (88.51%), Postives = 80/87 (91.95%), Query Frame = 3
Query:  486 MSCFKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGK 746
            MS + GKY DELIKNAAYIGTPGKGILAADESTGTIGKR +SINVENVE NRR+LRELLFCTPGALQYLSGVILFEETLYQKT  GK
Sbjct:    1 MSAYCGKYKDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVEENRRSLRELLFCTPGALQYLSGVILFEETLYQKTKDGK 87          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: UBL5_ARATH (Ubiquitin-like protein 5 OS=Arabidopsis thaliana GN=UBL5 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.206e-35
Identity = 70/73 (95.89%), Postives = 73/73 (100.00%), Query Frame = -2
Query:  183 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYS 401
            MIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTRA+KIRIQKWYNIYKDHITLKDYEIHDGMGLELYY+
Sbjct:    1 MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN 73          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALF_CICAR (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Cicer arietinum GN=ALDC PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.468e-35
Identity = 76/87 (87.36%), Postives = 77/87 (88.51%), Query Frame = 3
Query:  486 MSCFKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGK 746
            MS FK KY DELI NAAYIGTPGKGILAADESTGTIGKRL+SINVENVE NRRALRELLF  P  LQYLSGVILFEETLYQ TAAGK
Sbjct:    1 MSNFKSKYHDELIANAAYIGTPGKGILAADESTGTIGKRLASINVENVETNRRALRELLFTAPNVLQYLSGVILFEETLYQSTAAGK 87          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALF1_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.468e-35
Identity = 74/87 (85.06%), Postives = 80/87 (91.95%), Query Frame = 3
Query:  486 MSCFKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGK 746
            MS F GKYADELIKNA YI TPGKGILAADESTGTIGKRL+SINVEN+EANR+ALRELLF +P ALQYLSGVILFEETLYQK++ GK
Sbjct:    1 MSAFVGKYADELIKNAKYIATPGKGILAADESTGTIGKRLASINVENIEANRQALRELLFTSPNALQYLSGVILFEETLYQKSSEGK 87          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALF_SPIOL (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.046e-34
Identity = 73/87 (83.91%), Postives = 78/87 (89.66%), Query Frame = 3
Query:  486 MSCFKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGK 746
            M+ ++GKYADELI NA+YI TPGK ILAADESTGTIGKR  SINVENVE+NRRALRELLF TPGAL YLSGVILFEETLYQKTA GK
Sbjct:    1 MTAYRGKYADELIANASYIATPGKVILAADESTGTIGKRFPSINVENVESNRRALRELLFTTPGALPYLSGVILFEETLYQKTADGK 87          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALF2_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 2 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.684e-33
Identity = 76/88 (86.36%), Postives = 78/88 (88.64%), Query Frame = 3
Query:  486 MSCFKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGA-LQYLSGVILFEETLYQKTAAGK 746
            MS FK KY DELI NAAYIGTPGKGILAADESTGTIGKRLSSINVENVE+NR+ALRELLF      LQYLSGVILFEETLYQKTAAGK
Sbjct:    1 MSHFKSKYHDELIANAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRQALRELLFTASWLFLQYLSGVILFEETLYQKTAAGK 88          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: UBL5_PSAOB (Ubiquitin-like protein 5 OS=Psammomys obesus GN=UBL5 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.906e-28
Identity = 58/72 (80.56%), Postives = 65/72 (90.28%), Query Frame = -2
Query:  186 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY 401
            MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR +KI ++KWY I+KDH++L DYEIHDGM LELYY
Sbjct:    1 MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDYEIHDGMNLELYY 72          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: UBL5_MOUSE (Ubiquitin-like protein 5 OS=Mus musculus GN=Ubl5 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.906e-28
Identity = 58/72 (80.56%), Postives = 65/72 (90.28%), Query Frame = -2
Query:  186 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY 401
            MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR +KI ++KWY I+KDH++L DYEIHDGM LELYY
Sbjct:    1 MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDYEIHDGMNLELYY 72          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: UBL5_MESAU (Ubiquitin-like protein 5 OS=Mesocricetus auratus GN=UBL5 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.906e-28
Identity = 58/72 (80.56%), Postives = 65/72 (90.28%), Query Frame = -2
Query:  186 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY 401
            MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR +KI ++KWY I+KDH++L DYEIHDGM LELYY
Sbjct:    1 MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDYEIHDGMNLELYY 72          
The following BLAST results are available for this feature:
BLAST of CN185996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
ALF_MAIZE4.473e-3789.66Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_ORYSJ7.630e-3788.51Fructose-bisphosphate aldolase cytoplasmic isozyme... [more]
UBL5_ARATH3.206e-3595.89Ubiquitin-like protein 5 OS=Arabidopsis thaliana G... [more]
ALF_CICAR5.468e-3587.36Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF1_PEA5.468e-3585.06Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_SPIOL6.046e-3483.91Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF2_PEA6.684e-3386.36Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
UBL5_PSAOB2.906e-2880.56Ubiquitin-like protein 5 OS=Psammomys obesus GN=UB... [more]
UBL5_MOUSE2.906e-2880.56Ubiquitin-like protein 5 OS=Mus musculus GN=Ubl5 P... [more]
UBL5_MESAU2.906e-2880.56Ubiquitin-like protein 5 OS=Mesocricetus auratus G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002D05_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185996 ID=CN185996; Name=CN185996; organism=Citrus sinensis; type=EST; length=747bp
CGTCCCAGATATGTTACATAACCACAAATAAGTTTTTACAACTCTTCACA
AATTTTTTCTTACAAGACAGTATTAGTAAAGTTGGCCCTGCCGCATCTTC
CAATACCCCTTGCTTATTATGGCATATGGTTCCTAGTAGTATTGACTGCT
TGCAGCAGCATATATATTTAACGGTGGATTTAGCTGTAATAGAGTTCGAG
GCCCATGCCGTCGTGAATCTCGTAGTCCTTGAGAGTGATGTGGTCCTTGT
AGATGTTGTACCACTTCTGAATCCGAATCTTGTCGGCTCGAGTCCCGGTC
TGAGCCGCCACCAGCTTCTTCAAGTCGCCTATGGTGTCGTCTTCGTTGCA
CTTCACGCGCACCTTCTTCCCGAGCCTGTCGTTCAGCACCACCTCAATCA
TCTTTGTCTCCTGTTTTGATTTTCCCTGCCGAATGTCTGTTTCTCCCTCT
AACAAAACAAATTTTCTATCTTCAAGTAGATCACCATGTCTTGCTTCAAG
GGCAAATACGCCGATGAGCTCATTAAAAACGCTGCCTACATTGGCACCCC
TGGAAAGGGTATCCTTGCTGCTGATGAGTCAACAGGCACCATTGGCAAGC
GTCTATCCAGCATCAATGTTGAGAATGTTGAGGCAAACAGGCGTGCTCTC
CGCGAGCTCCTTTTCTGCACTCCCGGTGCCCTTCAGTACCTCAGTGGTGT
CATCCTCTTCGAGGAGACCCTCTACCAGAAGACTGCTGCTGGCAAGC
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