CN185991

Overview
NameCN185991
Unique NameCN185991
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length607
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig132 contig Csv1_Contig132:1..605. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185991 vs. ExPASy Swiss-Prot
Match: UBC32_ARATH (Ubiquitin carrier protein E2 32 OS=Arabidopsis thaliana GN=UBC32 PE=2 SV=1)

HSP 1 Score: 327.791 bits (839), Expect = 2.651e-89
Identity = 153/173 (88.44%), Postives = 166/173 (95.95%), Query Frame = 2
Query:   83 MAEDRYNLKNPPVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALAIKSREAAPKFGTPERQKLIDEIHEYMLSKA 601
            MA++RYN KNP VKRILQEVKEMQ+NPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPA+YPFKPPSFMLLTPNGRFET TKICLSISN+HPEHWQPSWSVRTALVALIAFMPT+PNGALGS+DY K+ERR LAIKSRE  PK+G+PERQK+IDEIH+Y+LSKA
Sbjct:    1 MADERYNRKNPAVKRILQEVKEMQANPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPADYPFKPPSFMLLTPNGRFETNTKICLSISNYHPEHWQPSWSVRTALVALIAFMPTSPNGALGSVDYPKDERRTLAIKSRETPPKYGSPERQKIIDEIHQYILSKA 173          
BLAST of CN185991 vs. ExPASy Swiss-Prot
Match: UB2J1_MOUSE (Ubiquitin-conjugating enzyme E2 J1 OS=Mus musculus GN=Ube2j1 PE=1 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 3.999e-53
Identity = 94/146 (64.38%), Postives = 118/146 (80.82%), Query Frame = 2
Query:   89 EDRYNLKNPPVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALAIKSRE 526
            E RYNLK+P VKR+++E  E++ +P+D + + PLE+N+FEW F +RGP D++F+GG+YHGRI LP EYP KPPS +LLT NGRFE   KICLSIS HHPE WQPSWS+RTAL+A+I FMPT   GA+GSLDY  EERRALA KS++
Sbjct:    2 ETRYNLKSPAVKRLMKEAAELK-DPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTANGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFMPTKGEGAIGSLDYTPEERRALAKKSQD 146          
BLAST of CN185991 vs. ExPASy Swiss-Prot
Match: UB2J1_HUMAN (Ubiquitin-conjugating enzyme E2 J1 OS=Homo sapiens GN=UBE2J1 PE=1 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 3.999e-53
Identity = 94/146 (64.38%), Postives = 118/146 (80.82%), Query Frame = 2
Query:   89 EDRYNLKNPPVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALAIKSRE 526
            E RYNLK+P VKR+++E  E++ +P+D + + PLE+N+FEW F +RGP D++F+GG+YHGRI LP EYP KPPS +LLT NGRFE   KICLSIS HHPE WQPSWS+RTAL+A+I FMPT   GA+GSLDY  EERRALA KS++
Sbjct:    2 ETRYNLKSPAVKRLMKEAAELK-DPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTANGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFMPTKGEGAIGSLDYTPEERRALAKKSQD 146          
BLAST of CN185991 vs. ExPASy Swiss-Prot
Match: UBC6_CANGA (Ubiquitin-conjugating enzyme E2 6 OS=Candida glabrata GN=UBC6 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.747e-32
Identity = 61/133 (45.86%), Postives = 89/133 (66.92%), Query Frame = 2
Query:  122 KRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALAIKS 520
            KR+ +E K M  NP    ++ P EENI EW + I GP DT ++GG YHG +  P++YP+KPP+  ++TPNGRF+  T++CLS+S++HP+ W P WSV T L  L++FM T      GS+   ++E++ LA KS
Sbjct:    8 KRLTKEYKMMVENPPPFIIARPNEENILEWHYVISGPPDTPYDGGQYHGTLTFPSDYPYKPPAIRMITPNGRFKENTRLCLSMSDYHPDTWNPGWSVATILNGLLSFM-TGDESTTGSITTTQQEKKILAKKS 139          
BLAST of CN185991 vs. ExPASy Swiss-Prot
Match: UB2JL_DICDI (Ubiquitin-conjugating enzyme E2 J2-like OS=Dictyostelium discoideum GN=DDB_G0294380 PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.522e-31
Identity = 63/152 (41.45%), Postives = 96/152 (63.16%), Query Frame = 2
Query:   83 MAEDRYNLKNPPVK----RILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALAIKSRE 526
            M+E   ++ +PP K    R+ +E +E+  NP ++ +  P   NI EW + I G  +T +EGG+Y+G++     YP  PPS ++ TP+GRFETQ ++CLSIS++HPE W PSWS  + L+ L++FM  N   A GS+    +E+R LA KS +
Sbjct:    1 MSEHNSDIVHPPTKDCITRLKREFQEISKNPIENILVTPSPSNILEWHYVILGASNTPYEGGVYYGQLIFKYNYPLSPPSILMTTPSGRFETQKRLCLSISDYHPESWSPSWSTSSILLGLLSFMSDNEVTA-GSIVTTNDEKRILATKSMD 151          
BLAST of CN185991 vs. ExPASy Swiss-Prot
Match: UBC6_YEAST (Ubiquitin-conjugating enzyme E2 6 OS=Saccharomyces cerevisiae GN=UBC6 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.302e-31
Identity = 58/133 (43.61%), Postives = 87/133 (65.41%), Query Frame = 2
Query:  122 KRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALAIKS 520
            KR+ +E K M  NP    ++ P E+NI EW + I GP DT ++GG YHG +  P++YP+KPP+  ++TPNGRF+  T++CLS+S++HP+ W P WSV T L  L++FM T+     GS+     +++ LA  S
Sbjct:    8 KRLTKEYKLMVENPPPYILARPNEDNILEWHYIITGPADTPYKGGQYHGTLTFPSDYPYKPPAIRMITPNGRFKPNTRLCLSMSDYHPDTWNPGWSVSTILNGLLSFM-TSDEATTGSITTSDHQKKTLARNS 139          
BLAST of CN185991 vs. ExPASy Swiss-Prot
Match: UBC6_ASHGO (Ubiquitin-conjugating enzyme E2 6 OS=Ashbya gossypii GN=UBC6 PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.302e-31
Identity = 59/135 (43.70%), Postives = 87/135 (64.44%), Query Frame = 2
Query:  122 KRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALAIKSRE 526
            KR+ +E K M  NP    ++ P E+NI  W + I GP +T +E G YHG +  P +YPF PP+  +LTPNGRF   T++CLS+S++HP+ W PSWSV T L  L++FM T+   ++G+++     +R  A KS+E
Sbjct:    8 KRLSKEYKMMTENPPPYIVAAPKEDNILVWHYVITGPPETPYEDGQYHGTLVFPNDYPFNPPAIRMLTPNGRFRENTRLCLSMSDYHPDTWNPSWSVATILTGLLSFMTTD-ESSIGTMESTDSTKRKYAAKSKE 141          
BLAST of CN185991 vs. ExPASy Swiss-Prot
Match: UBC6_KLULA (Ubiquitin-conjugating enzyme E2 6 OS=Kluyveromyces lactis GN=UBC6 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 5.619e-31
Identity = 59/134 (44.03%), Postives = 88/134 (65.67%), Query Frame = 2
Query:  122 KRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALAIKSR 523
            KR+ +E K + +NP    ++ P E+NI EW + I GP  T +E G YHG +  P++YPF PP+  ++TPNGRF+  T++CLS+S++HPE W P+WSV T L  L++FM T      GS+    +++R LA KS+
Sbjct:    8 KRLTKEYKNIVNNPPPFIIAAPHEDNILEWHYVITGPPSTPYENGQYHGTLTFPSDYPFNPPAIRMITPNGRFKENTRLCLSMSDYHPEAWNPAWSVVTILNGLLSFM-TGDEQTTGSVSTSDKDKRTLAKKSK 140          
BLAST of CN185991 vs. ExPASy Swiss-Prot
Match: UBC6_DEBHA (Ubiquitin-conjugating enzyme E2 6 OS=Debaryomyces hansenii GN=UBC6 PE=3 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 1.252e-30
Identity = 61/135 (45.19%), Postives = 85/135 (62.96%), Query Frame = 2
Query:  122 KRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALAIKSRE 526
            KR+ +E K +  NP     + P +ENI EW + I GP  T FE G YHG ++ P+EYPFKPPS  ++TPNGRF   T++CLS+S++HP+ W P+WSV T L  L++FM T      GS+      ++ LA  S+E
Sbjct:    8 KRLTKEYKAITLNPPPYVSAKPNDENILEWHYVITGPPHTPFEEGQYHGILRFPSEYPFKPPSISMITPNGRFACNTRLCLSMSDYHPDTWNPAWSVATILTGLLSFM-TGDESTTGSITTSDNVKKRLARSSKE 141          
BLAST of CN185991 vs. ExPASy Swiss-Prot
Match: UBC6_SCHPO (Ubiquitin-conjugating enzyme E2 6 OS=Schizosaccharomyces pombe GN=ubc6 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 4.757e-30
Identity = 59/130 (45.38%), Postives = 83/130 (63.85%), Query Frame = 2
Query:  122 KRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALA 511
            KR+++E   +Q NP +   + P  ENI EW + I GP DT +EGG YHG +  P +YPFKPP+  ++TP+GRF+T T++CLS S+ HP+ W PSW V T LV L++FM T+     G +   +  RR  A
Sbjct:    8 KRLMKEYLALQKNPVELVDAKPATENILEWHYIITGPPDTPYEGGQYHGTLIFPPDYPFKPPAIRMITPSGRFQTNTRLCLSFSDFHPKSWNPSWMVSTILVGLVSFM-TSDEITTGGIVTSESTRRTYA 136          
The following BLAST results are available for this feature:
BLAST of CN185991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
UBC32_ARATH2.651e-8988.44Ubiquitin carrier protein E2 32 OS=Arabidopsis tha... [more]
UB2J1_MOUSE3.999e-5364.38Ubiquitin-conjugating enzyme E2 J1 OS=Mus musculus... [more]
UB2J1_HUMAN3.999e-5364.38Ubiquitin-conjugating enzyme E2 J1 OS=Homo sapiens... [more]
UBC6_CANGA1.747e-3245.86Ubiquitin-conjugating enzyme E2 6 OS=Candida glabr... [more]
UB2JL_DICDI2.522e-3141.45Ubiquitin-conjugating enzyme E2 J2-like OS=Dictyos... [more]
UBC6_YEAST4.302e-3143.61Ubiquitin-conjugating enzyme E2 6 OS=Saccharomyces... [more]
UBC6_ASHGO4.302e-3143.70Ubiquitin-conjugating enzyme E2 6 OS=Ashbya gossyp... [more]
UBC6_KLULA5.619e-3144.03Ubiquitin-conjugating enzyme E2 6 OS=Kluyveromyces... [more]
UBC6_DEBHA1.252e-3045.19Ubiquitin-conjugating enzyme E2 6 OS=Debaryomyces ... [more]
UBC6_SCHPO4.757e-3045.38Ubiquitin-conjugating enzyme E2 6 OS=Schizosacchar... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002D02_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185991 ID=CN185991; Name=CN185991; organism=Citrus sinensis; type=EST; length=607bp
CTTTAAAATGTCTACTCGTTCGCATACAAAGTCCTGATAGCCCTTGAGGA
CGTGAACCGATCGAAATCAGATCTGAAATCCAATGGCGGAAGACAGGTAC
AATTTGAAAAATCCCCCGGTGAAGAGAATCCTACAGGAGGTCAAAGAGAT
GCAATCAAATCCGTCAGATGATTTCATGAGCCTCCCTCTCGAGGAGAATA
TATTTGAATGGCAATTTGCGATCAGGGGACCGGGTGATACTGAATTTGAA
GGTGGGATTTATCATGGTCGGATTCAGTTACCTGCAGAATACCCATTCAA
GCCTCCTTCATTTATGCTCTTAACACCAAATGGGCGTTTTGAAACTCAGA
CCAAAATATGCTTAAGCATTTCGAATCATCATCCGGAGCACTGGCAACCA
TCTTGGAGTGTGAGGACTGCTCTTGTAGCACTAATTGCTTTCATGCCCAC
CAATCCAAATGGTGCTTTGGGCTCACTAGATTATAAGAAGGAAGAGAGGC
GTGCTCTGGCCATCAAATCTCGTGAAGCTGCCCCAAAATTTGGGACTCCT
GAACGTCAAAAACTCATTGATGAGATCCATGAATATATGTTAAGCAAGGC
ACCCCCT
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