EG358210

Overview
NameEG358210
Unique NameEG358210
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length441
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6867 contig Csv1_Contig6867:22..462. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358210 vs. ExPASy Swiss-Prot
Match: CYB5_TOBAC (Cytochrome b5 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.390e-13
Identity = 44/111 (39.64%), Postives = 63/111 (56.76%), Query Frame = 2
Query:    5 NVARFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETS----NNASFQEPKKKEMEAFVVKDNGVPKYAALLEFFVPLLVAGSYFAYRY 325
            +V +FL++HPGG+EVL+ A GKDAT  FE++GHS +A  +L  Y VG +    +  T+T     N   + + K  E   FVVK         LL+F VPL++ G  F  R+
Sbjct:   32 DVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSARAMLDEYYVGDIDSATI-PTKTKYTPPNQPHYNQDKTSE---FVVK---------LLQFLVPLIILGVAFGIRF 129          
BLAST of EG358210 vs. ExPASy Swiss-Prot
Match: CYB5S_TOBAC (Cytochrome b5, seed isoform OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.371e-13
Identity = 40/107 (37.38%), Postives = 56/107 (52.34%), Query Frame = 2
Query:    5 NVARFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQEPKKKEMEAFVVKDNGVPKYAALLEFFVPLLVAGSYFAYRY 325
            NV +FLE+HPGG EVL+ A GKDAT  FE+IGHS +A  +L  Y VG      ++ +       +  PK+        +D        LL+F VPL++ G  F   +
Sbjct:   32 NVTKFLEDHPGGGEVLLSATGKDATDDFEDIGHSSSARAMLDEYYVG-----DIDSSTIPTKVKYTPPKQPHYN----QDKTTEFIVKLLQFLVPLIILGVAFGVHF 129          
BLAST of EG358210 vs. ExPASy Swiss-Prot
Match: CYB52_ARATH (Probable cytochrome b5 isoform 2 OS=Arabidopsis thaliana GN=At2g32720 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 5.281e-13
Identity = 37/100 (37.00%), Postives = 57/100 (57.00%), Query Frame = 2
Query:    5 NVARFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQEPKKKEMEAFVVKDNGVPKYAALLEFFVPLLVAG 304
            NV +FLE+HPGG++VL+ + GKDAT  FE++GHS++A E++  Y VG     +++ T       +  PK+        +D        LL+F VPL + G
Sbjct:   32 NVTKFLEDHPGGDDVLLSSTGKDATDDFEDVGHSESAREMMEQYYVG-----EIDPTTIPKKVKYTPPKQPHYN----QDKTSEFIIKLLQFLVPLAILG 122          
BLAST of EG358210 vs. ExPASy Swiss-Prot
Match: CYB5_CANTR (Cytochrome b5 OS=Candida tropicalis GN=Cytb5 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.471e-12
Identity = 29/67 (43.28%), Postives = 49/67 (73.13%), Query Frame = 2
Query:    5 NVARFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQE 205
            N++ +++EHPGGEEV+++ AG DAT+ F++IGHS  AHE+L    +G L+G K+ + + + + S +E
Sbjct:   35 NISNYIDEHPGGEEVILDCAGTDATEAFDDIGHSDEAHEILEKLYIGNLKGAKIVEAKHAQSFSTEE 101          
BLAST of EG358210 vs. ExPASy Swiss-Prot
Match: CYB5_BOROF (Cytochrome b5 OS=Borago officinalis PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.471e-12
Identity = 39/112 (34.82%), Postives = 60/112 (53.57%), Query Frame = 2
Query:    5 NVARFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQEPKK-----KEMEAFVVKDNGVPKYAALLEFFVPLLVAGSYFAYRY 325
            +V +FLE+HPGG++VL+ A GKDAT  FE+IGHS +A  +L  Y VG      ++ +   +   +  PK+      +   FV+K         LL+F VPL++       R+
Sbjct:   29 DVTKFLEDHPGGDDVLLSATGKDATDDFEDIGHSSSAKAMLDEYYVG-----DIDSSSIPSQVKYTPPKQPLYNPDKTREFVIK---------LLQFLVPLVILAGAIGIRF 126          
BLAST of EG358210 vs. ExPASy Swiss-Prot
Match: CYB5_MUSDO (Cytochrome b5 OS=Musca domestica GN=Cyt-b5 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 9.960e-12
Identity = 32/72 (44.44%), Postives = 46/72 (63.89%), Query Frame = 2
Query:    5 NVARFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQEPKKKE 220
            +V  FL EHPGGEEVL+E AGKDAT+ FE++GHS  A E++  Y+VG L   +  +    +  ++   +K E
Sbjct:   33 DVTAFLNEHPGGEEVLIEQAGKDATEHFEDVGHSSDAREMMKQYKVGELVAEERSNVPEKSEPTWNTEQKTE 104          
BLAST of EG358210 vs. ExPASy Swiss-Prot
Match: CYB51_ARATH (Cytochrome b5 isoform 1 OS=Arabidopsis thaliana GN=At5g53560 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.301e-11
Identity = 35/110 (31.82%), Postives = 60/110 (54.55%), Query Frame = 2
Query:    5 NVARFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTET---SNNASFQEPKKKEMEAFVVKDNGVPKYAALLEFFVPLLVAGSYFAYRY 325
            +V  F+++HPGG+EVL+ + GKDAT  FE++GHS  A +++  Y +G +    +  T T       ++ + K  E   F++K         +L+F VP+L+ G     R+
Sbjct:   32 DVTPFMDDHPGGDEVLLSSTGKDATNDFEDVGHSDTARDMMDKYFIGEIDSSSVPATRTYVAPQQPAYNQDKTPE---FIIK---------ILQFLVPILILGLALVVRH 129          
BLAST of EG358210 vs. ExPASy Swiss-Prot
Match: CYB5_ORYSJ (Cytochrome b5 OS=Oryza sativa subsp. japonica GN=Os05g0108800 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 2.219e-11
Identity = 40/112 (35.71%), Postives = 60/112 (53.57%), Query Frame = 2
Query:    5 NVARFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQEPKKK------EMEAFVVKDNGVPKYAALLEFFVPLLVAGSYFAYR 322
            NV++FLE+HPGG++VL+ + GKDAT  FE++GHS  A  ++  Y VG +      DT T    +   P K+      +   F++K         +L+F VPL + G   A R
Sbjct:   33 NVSKFLEDHPGGDDVLLSSTGKDATDDFEDVGHSTTARAMMDEYYVGDI------DTSTIPARTKYVPPKQPHYNQDKTPEFIIK---------ILQFLVPLAILGLAVAIR 129          
BLAST of EG358210 vs. ExPASy Swiss-Prot
Match: CYB5_DROME (Cytochrome b5 OS=Drosophila melanogaster GN=Cyt-b5 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.219e-11
Identity = 38/93 (40.86%), Postives = 57/93 (61.29%), Query Frame = 2
Query:    5 NVARFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQEP---KKKEMEAFVVKDNGVPKYAALL 274
            +V  FL EHPGGEEVL+E AGKDAT+ FE++GHS  A +++  Y++G     +L ++E ++ A   EP    +++ E   VK   VP    L+
Sbjct:   33 DVTAFLNEHPGGEEVLIEQAGKDATENFEDVGHSNDARDMMKKYKIG-----ELVESERTSVAQKSEPTWSTEQQTEESSVKSWLVPLVLCLV 120          
BLAST of EG358210 vs. ExPASy Swiss-Prot
Match: CYB5B_PONAB (Cytochrome b5 type B OS=Pongo abelii GN=CYB5B PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 3.785e-11
Identity = 35/95 (36.84%), Postives = 52/95 (54.74%), Query Frame = 2
Query:    5 NVARFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQEPKKKEMEAFVVKDNGVPKYAALLEFFVP 289
            +V RFL EHPGGEEVL+E AG DA++ FE++GHS  A E+L  Y +G +    L+    S + S  +  K     +++   G      L  ++ P
Sbjct:   47 DVTRFLNEHPGGEEVLLEQAGVDASESFEDVGHSSDAREMLKQYYIGDIHPSDLKPENGSKDPSKNDTCKSCWAYWILPIIGAVLLGFLYRYYTP 141          
The following BLAST results are available for this feature:
BLAST of EG358210 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
CYB5_TOBAC1.390e-1339.64Cytochrome b5 OS=Nicotiana tabacum PE=2 SV=1[more]
CYB5S_TOBAC2.371e-1337.38Cytochrome b5, seed isoform OS=Nicotiana tabacum P... [more]
CYB52_ARATH5.281e-1337.00Probable cytochrome b5 isoform 2 OS=Arabidopsis th... [more]
CYB5_CANTR4.471e-1243.28Cytochrome b5 OS=Candida tropicalis GN=Cytb5 PE=3 ... [more]
CYB5_BOROF4.471e-1234.82Cytochrome b5 OS=Borago officinalis PE=2 SV=1[more]
CYB5_MUSDO9.960e-1244.44Cytochrome b5 OS=Musca domestica GN=Cyt-b5 PE=1 SV... [more]
CYB51_ARATH1.301e-1131.82Cytochrome b5 isoform 1 OS=Arabidopsis thaliana GN... [more]
CYB5_ORYSJ2.219e-1135.71Cytochrome b5 OS=Oryza sativa subsp. japonica GN=O... [more]
CYB5_DROME2.219e-1140.86Cytochrome b5 OS=Drosophila melanogaster GN=Cyt-b5... [more]
CYB5B_PONAB3.785e-1136.84Cytochrome b5 type B OS=Pongo abelii GN=CYB5B PE=2... [more]

Pages

back to top
Properties
Property NameValue
Genbank description1g7 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0001g7, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358210 ID=EG358210; Name=EG358210; organism=Citrus sinensis; type=EST; length=441bp
ACTGAACGTTGCAAGGTTCCTGGAAGAACACCCAGGAGGAGAGGAAGTGC
TGATGGAGGCGGCAGGGAAGGATGCAACAAAGCAGTTTGAGGAAATTGGA
CACAGCAAGGCTGCTCACGAGTTGCTCTTCAACTACCGGGTGGGTGTTCT
TCAAGGTTACAAGTTAGAAGACACAGAAACATCCAATAATGCTTCATTCC
AGGAGCCCAAAAAGAAAGAGATGGAGGCTTTTGTCGTCAAGGATAATGGC
GTGCCTAAATATGCAGCTCTTCTCGAGTTCTTTGTGCCACTCTTGGTTGC
TGGTTCCTACTTTGCTTACAGGTATCTGGCCTGAGCCCAGAACATCCTTG
ACTGGATCATCCGCTTCCTCTTATATGTCTGCTTGATGAATTGCTGCAAG
TCTCGCTGTCAGTAGGCAAGGCAACGAATGATTTAACCATG
back to top