DC900110
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900110 vs. ExPASy Swiss-Prot
Match: FADS3_BOVIN (Fatty acid desaturase 3 OS=Bos taurus GN=FADS3 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.418e-15 Identity = 38/94 (40.43%), Postives = 55/94 (58.51%), Query Frame = -3 Query: 274 LNHFAANVYLGPPKGNDWFEKQTSGTLDIACSSWMDWFHGGLQFQLEHHLFPRLPRCQLRKISPVVRDLCKKHNMPYRSLSFFEANVWTIRTLR 555 +NH + G K DW Q + T ++ S ++DWF G L FQ+EHHLFP +PR R+++P+V+ LC KH + Y F A V IR+L+ Sbjct: 339 MNHIPREI--GHEKHRDWASSQLAATCNVEPSLFIDWFSGHLNFQIEHHLFPTMPRHNYRRVAPLVKALCAKHGLSYEVKPFLTALVDIIRSLK 430
BLAST of DC900110 vs. ExPASy Swiss-Prot
Match: FADS2_MACFA (Fatty acid desaturase 2 OS=Macaca fascicularis GN=FADS2 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.535e-15 Identity = 36/78 (46.15%), Postives = 49/78 (62.82%), Query Frame = -3 Query: 274 DWFEKQTSGTLDIACSSWMDWFHGGLQFQLEHHLFPRLPRCQLRKISPVVRDLCKKHNMPYRSLSFFEANVWTIRTLR 507 DWF Q + T ++ S + DWF G L FQ+EHHLFP +PR L KI+P+V+ LC KH + Y+ A + IR+LR Sbjct: 354 DWFSSQLTATCNVEQSFFNDWFSGHLNFQIEHHLFPTMPRHNLHKIAPLVKSLCAKHGIEYQEKPLLRALLDIIRSLR 431
BLAST of DC900110 vs. ExPASy Swiss-Prot
Match: FADS3_HUMAN (Fatty acid desaturase 3 OS=Homo sapiens GN=FADS3 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.841e-15 Identity = 43/126 (34.13%), Postives = 69/126 (54.76%), Query Frame = -3 Query: 274 VSYLPNW--PERVMFVMASFTVTAIQHIQFC-LNHFAANVYLGPPKGNDWFEKQTSGTLDIACSSWMDWFHGGLQFQLEHHLFPRLPRCQLRKISPVVRDLCKKHNMPYRSLSFFEANVWTIRTLR 642 +SYLP + P ++F +A + + + +NH + G K DW Q + T ++ S + +WF G L FQ+EHHLFPR+PR +++P+V+ LC KH + Y F A V +R+L+ Sbjct: 309 LSYLPFYGVPGVLLFFVAVRVLESHWFVWITQMNHIPKEI--GHEKHRDWVSSQLAATCNVEPSLFTNWFSGHLNFQIEHHLFPRMPRHNYSRVAPLVKSLCAKHGLSYEVKPFLTALVDIVRSLK 432
BLAST of DC900110 vs. ExPASy Swiss-Prot
Match: FADS2_PONAB (Fatty acid desaturase 2 OS=Pongo abelii GN=FADS2 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.679e-14 Identity = 35/78 (44.87%), Postives = 49/78 (62.82%), Query Frame = -3 Query: 274 DWFEKQTSGTLDIACSSWMDWFHGGLQFQLEHHLFPRLPRCQLRKISPVVRDLCKKHNMPYRSLSFFEANVWTIRTLR 507 DWF Q + T ++ S + DWF G L FQ+EHHLFP +PR L KI+P+V+ LC KH + Y+ A + IR+L+ Sbjct: 354 DWFSSQLTATCNVEQSFFNDWFSGHLNFQIEHHLFPTMPRHNLHKIAPLVKSLCAKHGIEYQEKPLLRALLDIIRSLK 431
BLAST of DC900110 vs. ExPASy Swiss-Prot
Match: FADS2_HUMAN (Fatty acid desaturase 2 OS=Homo sapiens GN=FADS2 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.679e-14 Identity = 35/78 (44.87%), Postives = 49/78 (62.82%), Query Frame = -3 Query: 274 DWFEKQTSGTLDIACSSWMDWFHGGLQFQLEHHLFPRLPRCQLRKISPVVRDLCKKHNMPYRSLSFFEANVWTIRTLR 507 DWF Q + T ++ S + DWF G L FQ+EHHLFP +PR L KI+P+V+ LC KH + Y+ A + IR+L+ Sbjct: 354 DWFSSQLTATCNVEQSFFNDWFSGHLNFQIEHHLFPTMPRHNLHKIAPLVKSLCAKHGIEYQEKPLLRALLDIIRSLK 431
BLAST of DC900110 vs. ExPASy Swiss-Prot
Match: FADS2_BOVIN (Fatty acid desaturase 2 OS=Bos taurus GN=FADS2 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.679e-14 Identity = 39/94 (41.49%), Postives = 53/94 (56.38%), Query Frame = -3 Query: 274 LNHFAANVYLGPPKGNDWFEKQTSGTLDIACSSWMDWFHGGLQFQLEHHLFPRLPRCQLRKISPVVRDLCKKHNMPYRSLSFFEANVWTIRTLR 555 +NH + P + DWF Q + T ++ S + DWF G L FQ+EHHLFP +PR L KI+P+VR LC KH + Y+ A I +LR Sbjct: 340 MNHIVMEIDREPYR--DWFSSQLAATCNVEQSFFNDWFSGHLNFQIEHHLFPTMPRHNLHKIAPLVRSLCAKHGIEYQEKPLLRALQDIIGSLR 431
BLAST of DC900110 vs. ExPASy Swiss-Prot
Match: FADS2_MOUSE (Fatty acid desaturase 2 OS=Mus musculus GN=Fads2 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.740e-14 Identity = 36/94 (38.30%), Postives = 54/94 (57.45%), Query Frame = -3 Query: 274 LNHFAANVYLGPPKGNDWFEKQTSGTLDIACSSWMDWFHGGLQFQLEHHLFPRLPRCQLRKISPVVRDLCKKHNMPYRSLSFFEANVWTIRTLR 555 +NH + L + DWF Q + T ++ S + DWF G L FQ+EHHLFP +PR L KI+P+V+ LC KH + Y+ A + + +L+ Sbjct: 340 MNHLVMEIDLDHYR--DWFSSQLAATCNVEQSFFNDWFSGHLNFQIEHHLFPTMPRHNLHKIAPLVKSLCAKHGIEYQEKPLLRALIDIVSSLK 431
BLAST of DC900110 vs. ExPASy Swiss-Prot
Match: FADS2_RAT (Fatty acid desaturase 2 OS=Rattus norvegicus GN=Fads2 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.379e-14 Identity = 36/94 (38.30%), Postives = 54/94 (57.45%), Query Frame = -3 Query: 274 LNHFAANVYLGPPKGNDWFEKQTSGTLDIACSSWMDWFHGGLQFQLEHHLFPRLPRCQLRKISPVVRDLCKKHNMPYRSLSFFEANVWTIRTLR 555 +NH + L + DWF Q + T ++ S + DWF G L FQ+EHHLFP +PR L KI+P+V+ LC KH + Y+ A + + +L+ Sbjct: 340 MNHIVMEIDLDHYR--DWFSSQLAATCNVEQSFFNDWFSGHLNFQIEHHLFPTMPRHNLHKIAPLVKSLCAKHGIEYQEKPLLRALLDIVSSLK 431
BLAST of DC900110 vs. ExPASy Swiss-Prot
Match: FADS3_RAT (Fatty acid desaturase 3 OS=Rattus norvegicus GN=Fads3 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13 Identity = 36/94 (38.30%), Postives = 53/94 (56.38%), Query Frame = -3 Query: 274 LNHFAANVYLGPPKGNDWFEKQTSGTLDIACSSWMDWFHGGLQFQLEHHLFPRLPRCQLRKISPVVRDLCKKHNMPYRSLSFFEANVWTIRTLR 555 +NH + G K DW Q + T ++ S ++DWF G L FQ+EHHLFP +PR R+++P+V+ C KH + Y F A V I +L+ Sbjct: 345 MNHIPKEI--GHEKHRDWASSQLAATCNVEPSLFIDWFSGHLNFQIEHHLFPTMPRHNYRRVAPLVKAFCAKHGLHYEVKPFLTALVDIIGSLK 436
BLAST of DC900110 vs. ExPASy Swiss-Prot
Match: FADS3_MOUSE (Fatty acid desaturase 3 OS=Mus musculus GN=Fads3 PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13 Identity = 36/94 (38.30%), Postives = 53/94 (56.38%), Query Frame = -3 Query: 274 LNHFAANVYLGPPKGNDWFEKQTSGTLDIACSSWMDWFHGGLQFQLEHHLFPRLPRCQLRKISPVVRDLCKKHNMPYRSLSFFEANVWTIRTLR 555 +NH + G K DW Q + T ++ S ++DWF G L FQ+EHHLFP +PR R+++P+V+ C KH + Y F A V I +L+ Sbjct: 345 MNHIPKEI--GHEKHRDWASSQLAATCNVEPSLFIDWFSGHLNFQIEHHLFPTMPRHNYRRVAPLVKAFCAKHGLHYEVKPFLTALVDIIGSLK 436 The following BLAST results are available for this feature:
BLAST of DC900110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900110 ID=DC900110; Name=DC900110; organism=Citrus sinensis; type=EST; length=713bpback to top |