DC900109
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900109 vs. ExPASy Swiss-Prot
Match: FADS2_PONAB (Fatty acid desaturase 2 OS=Pongo abelii GN=FADS2 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.149e-18 Identity = 61/209 (29.19%), Postives = 97/209 (46.41%), Query Frame = 3 Query: 27 QSAALMEAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYFV-----QDF-EVSEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESVW-AHLGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTH 626 + AA E + EE++ HN D W+ I KVY++T+W+ QHPGG + + AG+D TDAF A+HP + ++L L G QD + S+I++D+R L +F+ L + + + + V + W + L + +L Q+ ++ HD GH V PK+N + L G S WW H Sbjct: 9 EGAAEREVSVPTFSWEEIQKHNLRTDRWLVIDRKVYNITKWSIQHPGGQRVIGHYAGEDATDAFRAFHPDLEFVGKFLKPLLIGELAPEEPSQDHGKNSKITEDFRALRKTAEDMNLFKTNHVFFLLLLAHIIALESIAWFTVFYFGNGWISTLITAFVLATSQAQAGWLQHDYGHLSVYRKPKWNHLVHKFVIGHLKGASANWWNHRH 217
BLAST of DC900109 vs. ExPASy Swiss-Prot
Match: FADS2_HUMAN (Fatty acid desaturase 2 OS=Homo sapiens GN=FADS2 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.112e-18 Identity = 66/220 (30.00%), Postives = 103/220 (46.82%), Query Frame = 3 Query: 27 QSAALMEAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYFV-----QDF-EVSEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESV-W---AHLGSG--------MLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTH 626 + AA E + EE++ HN D W+ I KVY++T+W+ QHPGG + + AG+D TDAF A+HP + ++L L G QD + S+I++D+R L +F K HV F++++ ++ ES+ W + G+G +L Q+ ++ HD GH V PK+N + L G S WW H Sbjct: 9 EGAAEREVSVPTFSWEEIQKHNLRTDRWLVIDRKVYNITKWSIQHPGGQRVIGHYAGEDATDAFRAFHPDLEFVGKFLKPLLIGELAPEEPSQDHGKNSKITEDFRALRKTAEDMNLF-KTNHV----------FFLLLLAHIIALESIAWFTVFYFGNGWIPTLITAFVLATSQAQAGWLQHDYGHLSVYRKPKWNHLVHKFVIGHLKGASANWWNHRH 217
BLAST of DC900109 vs. ExPASy Swiss-Prot
Match: FADS2_MACFA (Fatty acid desaturase 2 OS=Macaca fascicularis GN=FADS2 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.371e-18 Identity = 66/220 (30.00%), Postives = 102/220 (46.36%), Query Frame = 3 Query: 27 QSAALMEAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYFV-----QDF-EVSEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESV-W---AHLGSG--------MLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTH 626 + AA E + EE++ HN D W+ I KVY++T+W+ QHPGG + + AG+D TDAF A+HP + ++L L G QD + S+I +D+R L +F K HV F++++ ++ ES+ W + G+G +L Q+ ++ HD GH V PK+N + L G S WW H Sbjct: 9 EGAAEREVPMPTFSWEEIQKHNLRTDRWLVIDRKVYNITKWSTQHPGGQRVIGHYAGEDATDAFRAFHPDLKFVGKFLKPLLIGELAPEEPSQDHGKNSKIIEDFRALKKTAEDMNLF-KTNHV----------FFLLLLAHIIALESIAWFTVFYFGNGWIPTLITAFVLATSQAQAGWLQHDYGHLSVYRKPKWNHLVHKFVIGHLKGASANWWNHRH 217
BLAST of DC900109 vs. ExPASy Swiss-Prot
Match: FADS1_PAPAN (Fatty acid desaturase 1 OS=Papio anubis GN=FADS1 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.162e-18 Identity = 60/226 (26.55%), Postives = 108/226 (47.79%), Query Frame = 3 Query: 18 PIFQSAALMEAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYH--PGTAWQYLDKLFTGYFVQD---FEVS---EISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGV------LCCESVWAHLGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWK---WTHNGPPHC 644 P+ + +Y T +E+ + E+ W+ I KVYD++E+ ++HPGG + + AGQD TD F+A+H G +Y++ L G + FE + E++ ++R L + G+ K HV + L+ ++++ G + S L +LL IQ+ ++ HD GH V ++ K+N + L G+ +WW + H+ P+C Sbjct: 5 PVAAKTPVQGPTPRYFTWDEVAQRSGCEERWLVIDRKVYDISEFTRRHPGGSRVISHYAGQDATDPFVAFHSNKGLVKKYMNSLLIGELSPEQPSFEPTKNKELTDEFRELRATVEQMGLM-KANHV----FFLLYLLHILLLDGAAWLTLWIFGTSFLPFLLCAVLLTAAQIQAGWLQHDLGHLSVFSTSKWNHLVHHFVIGHLKGVPASWWNHMHFQHHAKPNC 225
BLAST of DC900109 vs. ExPASy Swiss-Prot
Match: FADS1_HUMAN (Fatty acid desaturase 1 OS=Homo sapiens GN=FADS1 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.481e-17 Identity = 58/228 (25.44%), Postives = 106/228 (46.49%), Query Frame = 3 Query: 18 PIFQSAALMEAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYH--PGTAWQYLDKLFTGYFVQD---FEVS---EISKDYRRLYIEFAKQGMFEKKQ-----HVASCALTCVALMFVVVVYGVLCCESVWAHLGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWK---WTHNGPPHCLQQ 653 P+ A +Y T +E+ + E+ W+ I KVY+++E+ ++HPGG + + AGQD TD F+A+H G +Y++ L G + FE + E++ ++R L + G+ + ++ L A + V+G S L +LL + Q+ ++ HD GH V ++ K+N + L G +WW + H+ P+C ++ Sbjct: 5 PVAAETAAQGPTPRYFTWDEVAQRSGCEERWLVIDRKVYNISEFTRRHPGGSRVISHYAGQDATDPFVAFHINKGLVKKYMNSLLIGELSPEQPSFEPTKNKELTDEFRELRATVERMGLMKANHVFFLLYLLHILLLDGAAWLTLWVFGT----SFLPFLLCAVLLSAVQAQAGWLQHDFGHLSVFSTSKWNHLLHHFVIGHLKGAPASWWNHMHFQHHAKPNCFRK 228
BLAST of DC900109 vs. ExPASy Swiss-Prot
Match: FADS2_DANRE (Fatty acid desaturase 2 OS=Danio rerio GN=fads2 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.547e-17 Identity = 57/198 (28.79%), Postives = 91/198 (45.96%), Query Frame = 3 Query: 66 TAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAWQYLDKLFTGYFVQDFEVSEIS----------KDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESVWAH-LGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTH 626 T EE++ H K D W+ ++ KVY+V++W K+HPGG L + AG+D T+AF A+HP Q + K + + E SE S +D+R L +G F+ + + L + L+ + V + W + L ++L Q+ ++ HD GH V + N + L G S WW H Sbjct: 22 TWEEVQKHTKHGDQWVVVERKVYNVSQWVKRHPGGLRILGHYAGEDATEAFTAFHPNL--QLVRKYLKPLLIGELEASEPSQDRQKNAALVEDFRALRERLEAEGCFKTQPLFFALHLGHILLLEAIAFMMVWYFGTGWINTLIVAVILATAQSQAGWLQHDFGHLSVFKTSGMNHLVHKFVIGHLKGASAGWWNHRH 217
BLAST of DC900109 vs. ExPASy Swiss-Prot
Match: FADS2_BOVIN (Fatty acid desaturase 2 OS=Bos taurus GN=FADS2 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.947e-16 Identity = 55/209 (26.32%), Postives = 94/209 (44.98%), Query Frame = 3 Query: 27 QSAALMEAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYFVQD------FEVSEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESVW-AHLGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTH 626 + A +EA EE++ HN D W+ I KVY++T+W+ +HPGG + + AG+D TDAF+A+H + +++ L G + + S+I++D+R L +F+ Q L + M + + + + W + + +L Q+ ++ HD GH V +N I L G S WW H Sbjct: 9 EGATELEAPMPTFRWEEIQKHNLRTDKWLVIDRKVYNITKWSSRHPGGQRVIGHYAGEDATDAFLAFHRNLDFVRKFMKPLLIGELAPEEPSQDRGKNSQITEDFRALRKTAEDMNLFKSNQLFFLLHLAHIIAMESIAWFTLFYFGNGWIPTIITAFVLATSQAQAGWLQHDYGHLSVYKKSMWNHIVHKFVIGHLKGASANWWNHRH 217
BLAST of DC900109 vs. ExPASy Swiss-Prot
Match: FADS2_XENLA (Fatty acid desaturase 2 OS=Xenopus laevis GN=fads2 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.849e-16 Identity = 57/205 (27.80%), Postives = 93/205 (45.37%), Query Frame = 3 Query: 72 EELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYFVQDFEVSEISK------DYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESV-WA---HLGSG--------MLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTH 626 EE++ HN D W+ I+ KVY++++W K+HPGG + + AG+D TDAF A+HP + ++L L+ G ++ + K D+R L +F+ F+ ++ +L E + W +LG+G +LL Q+ ++ HD GH V K+N + L G S WW H Sbjct: 26 EEIQKHNLKTDKWLVIERKVYNISQWVKRHPGGMRIIGHYAGEDATDAFHAFHPDKTFVRKFLKPLYIGELAENEPSQDRDKNAQQVEDFRALRKTAEDMRLFKSN-----------PAFFIFYLFHILLIEFLAWCTLHYLGTGWIPAIITVLLLTISQAQAGWLQHDFGHLSVFEKSKWNHLVHKFVIGHLKGASANWWNHRH 219
BLAST of DC900109 vs. ExPASy Swiss-Prot
Match: FADS3_BOVIN (Fatty acid desaturase 3 OS=Bos taurus GN=FADS3 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.575e-16 Identity = 52/194 (26.80%), Postives = 90/194 (46.39%), Query Frame = 3 Query: 72 EELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYFVQDF------EVSEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESVWA-HLGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTH 626 E++R HN D W+ I+ +VYD++ WA++HPGG + + +D TDAF A+H ++ ++L L G + + +++ +D+R L +FE K L + M V+ + W + ++L QS + HD GH + + ++N +AQ L G S WW + H Sbjct: 24 EQVRRHNLPGDKWLVIERRVYDISRWAQRHPGGSRLIGHHGAEDATDAFHAFHQDLSFVRKFLQPLLIGELAPEEPSQDGPQNTQLIEDFRALRQAVEDMKLFEAKPAFFGLLLGHILAMEVLAWLMIYMLGPGWVPSTLAALILAISQAQSWCLQHDLGHTSIFRNSRWNHLAQQFVMGQLKGFSAHWWNFRH 217
BLAST of DC900109 vs. ExPASy Swiss-Prot
Match: FAD2L_MOUSE (Fatty acid desaturase 2-like protein OS=Mus musculus PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.463e-15 Identity = 60/201 (29.85%), Postives = 89/201 (44.28%), Query Frame = 3 Query: 66 TAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYH--PGTAWQYLDKLFTGYFVQDFEVSEISK------DYRRLYIEFAKQGMFEKK-----QHVASCALTCVALMFVVVVYGVLCCESVW-AHLGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTH 626 T +E++ H++ D W+ I KVY+VT+WA +HPGG L + AGQD TDAF A H G YL L G + E +K D+R L MF H+A + ++ ++ +G S W + LL Q +++ HD GH + K+N + L G+S WW + H Sbjct: 66 TWQEIQRHSQEADQWLVIDRKVYNVTDWAGKHPGGRRVLNHYAGQDATDAFRAMHLDLGMVKLYLKPLLIGELSPEEPSQEKNKNAQLVEDFRELRKTLEAMNMFSANLRFFFLHLAQILILEISAWLILHHFG-----SSWLVTILISFLLTVSQAQCSFLQHDLGHLSMFKKSKWNHLMHKFVMCHLKGLSADWWNYRH 261 The following BLAST results are available for this feature:
BLAST of DC900109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900109 ID=DC900109; Name=DC900109; organism=Citrus sinensis; type=EST; length=695bpback to top |