DC900106
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900106 vs. ExPASy Swiss-Prot
Match: GILT_HUMAN (Gamma-interferon-inducible lysosomal thiol reductase OS=Homo sapiens GN=IFI30 PE=1 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 8.068e-23 Identity = 69/187 (36.90%), Postives = 98/187 (52.41%), Query Frame = 2 Query: 86 VKLSLYYESLCPYCANFIEFQLVKVFNTDLSTIVNLRLVPYGNAQIRGPDKT--IICQHGQNECYLNTIHACAINAWPDVRIHFKLIQCIEGQASASEQPEAAWRKCCNDL--GFSQQPIDNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVTVNDQALEEAFQNFIAYVCKAYKGKFLPNACKSS 634 V ++LYYE+LC C F+ +L + + I+N+ LVPYGNAQ + CQHG+ EC N + AC ++ D+ + F I C+E E E + C G S I C G +L A+ TD+L+PPH +VPWVTVN + LE+ Q + VC+ Y+GK P+ C SS Sbjct: 73 VNVTLYYEALCGGCRAFLIRELFPTWLLVME-ILNVTLVPYGNAQEQNVSGRWEFKCQHGEEECKFNKVEACVLDEL-DMELAFLTIVCME----EFEDMERSLPLCLQLYAPGLSPDTIMECAMGDRGMQLMHANAQRTDALQPPHEYVPWVTVNGKPLEDQTQ-LLTLVCQLYQGK-KPDVCPSS 251
BLAST of DC900106 vs. ExPASy Swiss-Prot
Match: YVRI_CAEEL (GILT-like protein F37H8.5 OS=Caenorhabditis elegans GN=F37H8.5 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.782e-21 Identity = 64/187 (34.22%), Postives = 98/187 (52.41%), Query Frame = 2 Query: 65 AAAKSQKVKLSLYYESLCPYCANFIEFQLVKVFNTDLSTIVNLRLVPYGNAQIRGPDKTIICQHGQNECYLNTIHACAINAWPDVRIHFKLIQCIEGQASASEQPEAAWRKCCNDL---GFSQQPIDNCYQSGEGTKLTLKYAEETDSLKP-PHRFVPWVTVNDQALE--EAFQNFI-AYVCKAYKG 604 AA +QK+ +++ E+LCP C NF+ QL + + + VN+ LVP+GNA++ D TI CQHG+ EC +N C I++ D + + CIE + A ++C L G Q+ +C S G L K A T ++ P H+FVPWV +N +L + FQN + +C+ Y G Sbjct: 69 AATHNQKINITVLIEALCPDCQNFLTKQLYPIVFKNFANYVNIELVPFGNAKVL-EDGTIKCQHGEEECSINKFEGCFIDSMQD-QSPLPTLSCIEESLQKKVEFADAVQQCFEKLQIGGDIQRLTQSCLVSKLGADLQNKAAAATANVWPEQHKFVPWVIINGVSLTSFQGFQNQLPTLLCEWYSG 253
BLAST of DC900106 vs. ExPASy Swiss-Prot
Match: YKJ2_CAEEL (GILT-like protein C02D5.2 OS=Caenorhabditis elegans GN=C02D5.2 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.087e-15 Identity = 53/186 (28.49%), Postives = 90/186 (48.39%), Query Frame = 2 Query: 86 VKLSLYYESLCPYCANFIEFQLVKVFNTDLSTI--VNLRLVPYGNAQI--RGPDKTIICQHGQNECYLNTIHACAINAWPDVRIHFKLIQCIEGQASASEQPEAAWRKCCNDLGFSQ-QPIDNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVTVNDQALEEAFQNFIAYVCKAYKGKFLPNACK 628 VKL +Y E+ CP + F QL K ++ L + + L ++P+G A+ +G D CQHG EC +N + C I+ + + + C++G+ S E KC + S+ + + C G +L ++T SL P F+PW+ +N +A + VC+A + +P+ACK Sbjct: 139 VKLDVYMEAQCPDTSRFFRQQLKKAWDI-LGRLNRIELNVIPFGKARCTEKGNDFECQCQHGPTECQINQLMNCVIDRFGFPHRYLPGVLCMQGKYSLDEA-----MKCVTENYPSEYERMRECASGTRGRRLLALSGQKTASLTPAIDFIPWIVINGSRNSDALYDLTQNVCEAMQP--MPSACK 316
BLAST of DC900106 vs. ExPASy Swiss-Prot
Match: YO30_CAEBR (GILT-like protein CBG03282 OS=Caenorhabditis briggsae GN=CBG03282 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.084e-11 Identity = 44/180 (24.44%), Postives = 81/180 (45.00%), Query Frame = 2 Query: 80 QKVKLSLYYESLCPYCANFIEFQLVKVFNTDLST-IVNLRLVPYGNAQI-----RGPDKTIICQHGQNECYLNTIHACAINAWPDVRIHFKLIQCIEGQASASEQPEAAWRKCCNDLG-FSQQPIDNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVTVNDQALEEAFQNFIAYVCKAY 598 +KV + + E C + ++++ + ++ ST +N PYG G D C HG EC LN + AC I A P+ + +++ CI+G+ + S EA C N+ + + +C S G KL + + P + PW+ +N + +EA ++ ++C + Sbjct: 31 EKVNIVAFGEGRCSDTSFWMKWHWLPMWRMLGSTGRINFEYHPYGIKTTCVDSDSGDDVVCECHHGARECLLNQLQACVIEALPNFEEYMEVVTCIQGKQNISMAAEA----CFNEPSKLERAKMMSCADSRHGRKLFSDHENFVAQMAPEMDWAPWILINGKRYKEAEEDLWQFLCDRF 206 The following BLAST results are available for this feature:
BLAST of DC900106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900106 ID=DC900106; Name=DC900106; organism=Citrus sinensis; type=EST; length=741bpback to top |