CN185935
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185935 vs. ExPASy Swiss-Prot
Match: VATM_DICDI (Vacuolar proton translocating ATPase 100 kDa subunit OS=Dictyostelium discoideum GN=vatM PE=1 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.185e-31 Identity = 70/104 (67.31%), Postives = 80/104 (76.92%), Query Frame = -2 Query: 323 QMIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLLAWXXXXXXXXXXXXXXXXFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFS 634 Q+IHTIEFVLGAVSNTASYLRLWALSLAHSELSSVF+E++L+ A+V VLL+ME+LSAFLHALRLHWVEFQNKFY GDG +F P+S Sbjct: 702 QVIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFWERILIGQVERGNPFLAFVGFGAWLGASVAVLLLMESLSAFLHALRLHWVEFQNKFYIGDGVRFIPYS 805
BLAST of CN185935 vs. ExPASy Swiss-Prot
Match: VPP4_HUMAN (V-type proton ATPase 116 kDa subunit a isoform 4 OS=Homo sapiens GN=ATP6V0A4 PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.227e-28 Identity = 66/108 (61.11%), Postives = 74/108 (68.52%), Query Frame = -2 Query: 320 QMIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVL---LLAWXXXXXXXXXXXXXXXXFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSF 634 Q IHTIE+ LG +SNTASYLRLWALSLAH++LS V + V+ L TV +LL+ME LSAFLHALRLHWVEFQNKFY GDGYKFSPFSF Sbjct: 723 QAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVMNSGLQTRGWGGIVGVFIIFAVFAVLTVAILLIMEGLSAFLHALRLHWVEFQNKFYVGDGYKFSPFSF 830
BLAST of CN185935 vs. ExPASy Swiss-Prot
Match: VPP3_HUMAN (V-type proton ATPase 116 kDa subunit a isoform 3 OS=Homo sapiens GN=TCIRG1 PE=1 SV=3) HSP 1 Score: 125.561 bits (314), Expect = 2.733e-28 Identity = 68/111 (61.26%), Postives = 75/111 (67.57%), Query Frame = -2 Query: 317 QMIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLLAWXXXXXXXXXXXXXXXXFA-----TVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSFA 634 Q IHTIEF LG VSNTASYLRLWALSLAH++LS V + V+ + FA TV +LLVME LSAFLHALRLHWVEFQNKFY G GYK SPF+FA Sbjct: 716 QAIHTIEFCLGCVSNTASYLRLWALSLAHAQLSEVLWAMVMRIGLGLGREVGVAAVVLVPIFAAFAVMTVAILLVMEGLSAFLHALRLHWVEFQNKFYSGTGYKLSPFTFA 826
BLAST of CN185935 vs. ExPASy Swiss-Prot
Match: VPP4_MOUSE (V-type proton ATPase 116 kDa subunit a isoform 4 OS=Mus musculus GN=Atp6v0a4 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.661e-28 Identity = 68/110 (61.82%), Postives = 74/110 (67.27%), Query Frame = -2 Query: 320 QMIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVL-----LLAWXXXXXXXXXXXXXXXXFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSF 634 Q IHTIE+ LG +SNTASYLRLWALSLAH+ELS V + V+ L W TV +LLVME LSAFLHALRLHWVEFQNKFYEG G KFSPFSF Sbjct: 716 QAIHTIEYCLGCISNTASYLRLWALSLAHAELSEVLWTMVMSIGLRLQGWAGLVGVFIIFAVFAVL--TVAILLVMEGLSAFLHALRLHWVEFQNKFYEGAGSKFSPFSF 823
BLAST of CN185935 vs. ExPASy Swiss-Prot
Match: VPP1_PONAB (V-type proton ATPase 116 kDa subunit a isoform 1 OS=Pongo abelii GN=ATP6V0A1 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.731e-27 Identity = 63/108 (58.33%), Postives = 72/108 (66.67%), Query Frame = -2 Query: 320 QMIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVL---LLAWXXXXXXXXXXXXXXXXFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSF 634 Q IHTIE+ LG +SNTASYLRLWALSLAH++LS V + V+ L TV +LL+ME LSAFLHALRLHWVEFQNKFY G G+KF PFSF Sbjct: 720 QAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVIHIGLSVKSLAGGLVLFFFFTAFATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYSGTGFKFLPFSF 827
BLAST of CN185935 vs. ExPASy Swiss-Prot
Match: VPP1_HUMAN (V-type proton ATPase 116 kDa subunit a isoform 1 OS=Homo sapiens GN=ATP6V0A1 PE=1 SV=3) HSP 1 Score: 120.939 bits (302), Expect = 6.731e-27 Identity = 63/108 (58.33%), Postives = 72/108 (66.67%), Query Frame = -2 Query: 320 QMIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVL---LLAWXXXXXXXXXXXXXXXXFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSF 634 Q IHTIE+ LG +SNTASYLRLWALSLAH++LS V + V+ L TV +LL+ME LSAFLHALRLHWVEFQNKFY G G+KF PFSF Sbjct: 720 QAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVIHIGLSVKSLAGGLVLFFFFTAFATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYSGTGFKFLPFSF 827
BLAST of CN185935 vs. ExPASy Swiss-Prot
Match: VPP1_BOVIN (V-type proton ATPase 116 kDa subunit a isoform 1 OS=Bos taurus GN=ATP6V0A1 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.731e-27 Identity = 63/108 (58.33%), Postives = 72/108 (66.67%), Query Frame = -2 Query: 320 QMIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVL---LLAWXXXXXXXXXXXXXXXXFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSF 634 Q IHTIE+ LG +SNTASYLRLWALSLAH++LS V + V+ L TV +LL+ME LSAFLHALRLHWVEFQNKFY G G+KF PFSF Sbjct: 721 QAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVIHIGLKVKSLAGGLALFFIFAAFATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYSGTGFKFLPFSF 828
BLAST of CN185935 vs. ExPASy Swiss-Prot
Match: VPP1_CHICK (V-type proton ATPase 116 kDa subunit a isoform 1 OS=Gallus gallus GN=ATP6V0A1 PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.791e-27 Identity = 63/108 (58.33%), Postives = 72/108 (66.67%), Query Frame = -2 Query: 320 QMIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVL---LLAWXXXXXXXXXXXXXXXXFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSF 634 Q IHTIE+ LG +SNTASYLRLWALSLAH++LS V + V+ L TV +LLVME LSAFLHALRLHW+EFQNKFY G G+KF PFSF Sbjct: 721 QAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVIHTGLSVRSLAGGFGLVFIFAAFATLTVAILLVMEGLSAFLHALRLHWIEFQNKFYTGTGFKFLPFSF 828
BLAST of CN185935 vs. ExPASy Swiss-Prot
Match: VPP1_RAT (V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus GN=Atp6v0a1 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.148e-26 Identity = 63/108 (58.33%), Postives = 72/108 (66.67%), Query Frame = -2 Query: 320 QMIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVL---LLAWXXXXXXXXXXXXXXXXFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSF 634 Q IHTIE+ LG +SNTASYLRLWALSLAH++LS V + V+ L TV +LL+ME LSAFLHALRLHWVEFQNKFY G G+KF PFSF Sbjct: 721 QAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVIHIGLHVRSLAGGLGLFFIFAAFATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYTGTGFKFLPFSF 828
BLAST of CN185935 vs. ExPASy Swiss-Prot
Match: VPP1_MOUSE (V-type proton ATPase 116 kDa subunit a isoform 1 OS=Mus musculus GN=Atp6v0a1 PE=1 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.148e-26 Identity = 63/108 (58.33%), Postives = 72/108 (66.67%), Query Frame = -2 Query: 320 QMIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVL---LLAWXXXXXXXXXXXXXXXXFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSF 634 Q IHTIE+ LG +SNTASYLRLWALSLAH++LS V + V+ L TV +LL+ME LSAFLHALRLHWVEFQNKFY G G+KF PFSF Sbjct: 722 QAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVIHIGLHVRSLAGGLGLFFIFAAFATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYTGTGFKFLPFSF 829 The following BLAST results are available for this feature:
BLAST of CN185935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185935 ID=CN185935; Name=CN185935; organism=Citrus sinensis; type=EST; length=722bpback to top |