CN185917 | Citrus Genome Database

Overview


Name	CN185917
Unique Name	CN185917
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	382

Libraries


Library Name	Type
Washington Navel Orange Stored Fruit Pulp cDNA Library	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig9095	contig	Csv1_Contig9095:36..417.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CN185917 vs. ExPASy Swiss-Prot
Match: ENO_RICCO (Enolase OS=Ricinus communis PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.791e-16
Identity = 39/40 (97.50%), Postives = 39/40 (97.50%), Query Frame = -1

Query:  260 GAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 379
            GAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFR PVEPY
Sbjct:  406 GAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRTPVEPY 445

[Close]

BLAST of CN185917 vs. ExPASy Swiss-Prot
Match: ENO_ORYSJ (Enolase OS=Oryza sativa subsp. japonica GN=ENO1 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 1.329e-15
Identity = 39/40 (97.50%), Postives = 39/40 (97.50%), Query Frame = -1

Query:  260 GAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 379
            GAPCRSERLAKYNQLLRIEEELGA AVYAGAKFRAPVEPY
Sbjct:  407 GAPCRSERLAKYNQLLRIEEELGAAAVYAGAKFRAPVEPY 446

[Close]

BLAST of CN185917 vs. ExPASy Swiss-Prot
Match: ENO2_MAIZE (Enolase 2 OS=Zea mays GN=ENO2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.267e-15
Identity = 39/40 (97.50%), Postives = 39/40 (97.50%), Query Frame = -1

Query:  260 GAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 379
            GAPCRSERLAKYNQLLRIEEELGA AVYAGAKFRAPVEPY
Sbjct:  407 GAPCRSERLAKYNQLLRIEEELGAIAVYAGAKFRAPVEPY 446

[Close]

BLAST of CN185917 vs. ExPASy Swiss-Prot
Match: ENO2_HEVBR (Enolase 2 OS=Hevea brasiliensis GN=ENO2 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.960e-15
Identity = 38/40 (95.00%), Postives = 38/40 (95.00%), Query Frame = -1

Query:  260 GAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 379
            GAPCRSERLAKYNQLLRIEEELGAEAVYAGA FR PVEPY
Sbjct:  406 GAPCRSERLAKYNQLLRIEEELGAEAVYAGANFRTPVEPY 445

[Close]

BLAST of CN185917 vs. ExPASy Swiss-Prot
Match: ENO_ALNGL (Enolase OS=Alnus glutinosa GN=PGH1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.595e-15
Identity = 37/40 (92.50%), Postives = 38/40 (95.00%), Query Frame = -1

Query:  260 GAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 379
            GAPCRSERLAKYNQLLRIEEELG+EAVYAGA FR PVEPY
Sbjct:  401 GAPCRSERLAKYNQLLRIEEELGSEAVYAGANFRTPVEPY 440

[Close]

BLAST of CN185917 vs. ExPASy Swiss-Prot
Match: ENO1_MAIZE (Enolase 1 OS=Zea mays GN=ENO1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.595e-15
Identity = 38/40 (95.00%), Postives = 38/40 (95.00%), Query Frame = -1

Query:  260 GAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 379
            GAPCRSERLAKYNQLLRIEEELG  AVYAGAKFRAPVEPY
Sbjct:  407 GAPCRSERLAKYNQLLRIEEELGDAAVYAGAKFRAPVEPY 446

[Close]

BLAST of CN185917 vs. ExPASy Swiss-Prot
Match: ENO_SOLLC (Enolase OS=Solanum lycopersicum GN=PGH1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.614e-15
Identity = 37/40 (92.50%), Postives = 38/40 (95.00%), Query Frame = -1

Query:  260 GAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 379
            GAPCRSERLAKYNQLLRIEEELG+EAVYAGA FR PVEPY
Sbjct:  405 GAPCRSERLAKYNQLLRIEEELGSEAVYAGASFRKPVEPY 444

[Close]

BLAST of CN185917 vs. ExPASy Swiss-Prot
Match: ENO1_HEVBR (Enolase 1 OS=Hevea brasiliensis GN=ENO1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.614e-15
Identity = 37/40 (92.50%), Postives = 38/40 (95.00%), Query Frame = -1

Query:  260 GAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 379
            GAPCRSERLAKYNQLLRIEEELG+EAVYAGA FR PVEPY
Sbjct:  406 GAPCRSERLAKYNQLLRIEEELGSEAVYAGANFRKPVEPY 445

[Close]

BLAST of CN185917 vs. ExPASy Swiss-Prot
Match: ENO_ARATH (Enolase OS=Arabidopsis thaliana GN=ENO PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.273e-14
Identity = 35/40 (87.50%), Postives = 37/40 (92.50%), Query Frame = -1

Query:  260 GAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 379
            GAPCRSERLAKYNQLLRIEEELG+EA+YAG  FR PVEPY
Sbjct:  405 GAPCRSERLAKYNQLLRIEEELGSEAIYAGVNFRKPVEPY 444

[Close]

BLAST of CN185917 vs. ExPASy Swiss-Prot
Match: ENO_MESCR (Enolase OS=Mesembryanthemum crystallinum GN=PGH1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.583e-14
Identity = 36/40 (90.00%), Postives = 37/40 (92.50%), Query Frame = -1

Query:  260 GAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 379
            GAPCRSERLAKYNQLLRIEEELG +AVYAGA FR PVEPY
Sbjct:  405 GAPCRSERLAKYNQLLRIEEELGDKAVYAGANFRRPVEPY 444

The following BLAST results are available for this feature:

BLAST of CN185917 vs. ExPASy Swiss-Prot

BLAST of CN185917 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13


Match Name	E-value	Identity	Description
ENO_RICCO	7.791e-16	97.50	Enolase OS=Ricinus communis PE=2 SV=1	[more]
ENO_ORYSJ	1.329e-15	97.50	Enolase OS=Oryza sativa subsp. japonica GN=ENO1 PE...	[more]
ENO2_MAIZE	2.267e-15	97.50	Enolase 2 OS=Zea mays GN=ENO2 PE=2 SV=1	[more]
ENO2_HEVBR	2.960e-15	95.00	Enolase 2 OS=Hevea brasiliensis GN=ENO2 PE=1 SV=1	[more]
ENO_ALNGL	6.595e-15	92.50	Enolase OS=Alnus glutinosa GN=PGH1 PE=2 SV=1	[more]
ENO1_MAIZE	6.595e-15	95.00	Enolase 1 OS=Zea mays GN=ENO1 PE=2 SV=1	[more]
ENO_SOLLC	8.614e-15	92.50	Enolase OS=Solanum lycopersicum GN=PGH1 PE=2 SV=1	[more]
ENO1_HEVBR	8.614e-15	92.50	Enolase 1 OS=Hevea brasiliensis GN=ENO1 PE=1 SV=1	[more]
ENO_ARATH	3.273e-14	87.50	Enolase OS=Arabidopsis thaliana GN=ENO PE=1 SV=1	[more]
ENO_MESCR	5.583e-14	90.00	Enolase OS=Mesembryanthemum crystallinum GN=PGH1 P...	[more]

Pages

Properties


Property Name	Value
Genbank description	UCRCS05_0002A24_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002A24, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CN185917 ID=CN185917; Name=CN185917; organism=Citrus sinensis; type=EST; length=382bp
TTTTTTTTTTTTTTTTTAAGAAAGAAACAATGCCTTAGCACCGCAACCAG
ATACTCATTTTAATAAAACATGCTCTAGGAAATGGTTCCTCATACAGCAA
GGTTCAAGCTCTCAGACAAAAACTGTGTCAAAATTATTGAGGAAATATCT
TGGGTCACAAAATGCTAAAAACCCATAAAAATCCATTTTACATAACTTAT
TGAAGTAAACCTCCATTGCTCAAATCCAGCACCACACCAGATCAGCATCT
CAAACTCTAGTAGGGTTCAACAGGGGCACGGAACTTGGCACCAGCATAAA
CTGCTTCAGCACCGAGCTCTTCTTCAATTCTCAGAAGCTGATTATACTTT
GCAAGACGCTCTGACCTGCATGGTGCTCCCCT