CN185875
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185875 vs. ExPASy Swiss-Prot
Match: RNF38_HUMAN (RING finger protein 38 OS=Homo sapiens GN=RNF38 PE=1 SV=4) HSP 1 Score: 77.0258 bits (188), Expect = 1.194e-13 Identity = 35/96 (36.46%), Postives = 56/96 (58.33%), Query Frame = -3 Query: 206 DPDELSYEELLALGEVVG-SESRGLSADTLATLPTVNYKGGTSQNGSNDSCVICRLDYEDGETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVS 490 D + +YE LL L E +G ++ RGL+ + LP+ + Q+ CV+C D+E + L VL C H +H++C++ WLK N+ CP+C A+ S Sbjct: 414 DGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQS-EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADAS 508
BLAST of CN185875 vs. ExPASy Swiss-Prot
Match: RNF44_HUMAN (RING finger protein 44 OS=Homo sapiens GN=RNF44 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.660e-13 Identity = 37/99 (37.37%), Postives = 60/99 (60.61%), Query Frame = -3 Query: 206 EVDPDEL-SYEELLALGEVVG-SESRGLSADTLATLPTVNYKGGTSQNGSNDSCVICRLDYEDGETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVS 496 +VD E+ +YE LL L E +G ++ RGL+ + LP+ + + Q+ CV+C D+E + L VL C H +H++C++ WLK N+ CP+C A+ S Sbjct: 328 DVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQS-EQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADAS 425
BLAST of CN185875 vs. ExPASy Swiss-Prot
Match: RNF38_MOUSE (RING finger protein 38 OS=Mus musculus GN=Rnf38 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.660e-13 Identity = 35/96 (36.46%), Postives = 56/96 (58.33%), Query Frame = -3 Query: 206 DPDELSYEELLALGEVVG-SESRGLSADTLATLPTVNYKGGTSQNGSNDSCVICRLDYEDGETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVS 490 D + +YE LL L E +G ++ RGL+ + LP+ + Q+ CV+C D+E + L VL C H +H++C++ WLK N+ CP+C A+ S Sbjct: 417 DGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPSNHQS-EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICRADAS 511
BLAST of CN185875 vs. ExPASy Swiss-Prot
Match: RNF44_RAT (RING finger protein 44 OS=Rattus norvegicus GN=Rnf44 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.475e-13 Identity = 37/99 (37.37%), Postives = 60/99 (60.61%), Query Frame = -3 Query: 206 EVDPDEL-SYEELLALGEVVG-SESRGLSADTLATLPTVNYKGGTSQNGSNDSCVICRLDYEDGETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVS 496 +VD E+ +YE LL L E +G ++ RGL+ + LP+ + + Q+ CV+C D+E + L VL C H +H++C++ WLK N+ CP+C A+ S Sbjct: 246 DVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQS-EQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADAS 343
BLAST of CN185875 vs. ExPASy Swiss-Prot
Match: RNF44_MOUSE (RING finger protein 44 OS=Mus musculus GN=Rnf44 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.475e-13 Identity = 37/99 (37.37%), Postives = 60/99 (60.61%), Query Frame = -3 Query: 206 EVDPDEL-SYEELLALGEVVG-SESRGLSADTLATLPTVNYKGGTSQNGSNDSCVICRLDYEDGETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVS 496 +VD E+ +YE LL L E +G ++ RGL+ + LP+ + + Q+ CV+C D+E + L VL C H +H++C++ WLK N+ CP+C A+ S Sbjct: 303 DVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQS-EQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADAS 400
BLAST of CN185875 vs. ExPASy Swiss-Prot
Match: RNF44_DANRE (RING finger protein 44 OS=Danio rerio GN=rnf44 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.538e-13 Identity = 37/99 (37.37%), Postives = 59/99 (59.60%), Query Frame = -3 Query: 206 EVDPDEL-SYEELLALGEVVG-SESRGLSADTLATLPTVNYKGGTSQNGSNDSCVICRLDYEDGETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVS 496 +VD E+ +YE LL L E +G ++ RGL+ + LP+ + Q+ CV+C D+E + L VL C H +H++C++ WLK N+ CP+C A+ S Sbjct: 344 DVDDVEMENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNLENHQS-EQTLCVVCFSDFESRQLLRVLPCNHEFHAKCVDKWLKTNRTCPICRADAS 441
BLAST of CN185875 vs. ExPASy Swiss-Prot
Match: RF12B_XENLA (E3 ubiquitin-protein ligase rnf12-B OS=Xenopus laevis GN=rnf12-B PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.547e-11 Identity = 47/163 (28.83%), Postives = 67/163 (41.10%), Query Frame = -3 Query: 197 EEDNNPSVEYDSDVFSSDEAYARALQDAEERDMAARLLALAEIHDREIEDPEDHGGHSQDTWEEVDPDELSYEELLALGEVVGSESRGLSADTLATLPTVNYKGGTSQNGSNDSCVICRLDYEDGETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVSTSG 685 E NNPS E + + E A E D + + A E GG + + E LS + L E + RGL+ + + L T NY +N + +C +C +Y +G L L C H YH CI+ WL N CP+C V +G Sbjct: 604 EVQNNPSAEVRAPIAEPAEPVAPV-----ESDEGSNVATSATRR----EGRNSRGGVTLE--ESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLSTRNY----GENDALKTCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVLVAG 751 The following BLAST results are available for this feature:
BLAST of CN185875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185875 ID=CN185875; Name=CN185875; organism=Citrus sinensis; type=EST; length=750bpback to top |