CN185873

Overview
NameCN185873
Unique NameCN185873
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length768
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185873 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.736e-23
Identity = 46/66 (69.70%), Postives = 55/66 (83.33%), Query Frame = -2
Query:  294 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 491
            MSDTCGNCDCAD++QCVKKGSSY AD +ET+ S ++  VVMD  AAE +G CKCGP+C+C NCTCG
Sbjct:    1 MSDTCGNCDCADKTQCVKKGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64          
BLAST of CN185873 vs. ExPASy Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.288e-18
Identity = 39/64 (60.94%), Postives = 48/64 (75.00%), Query Frame = -2
Query:  291 TCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCGS 482
            TCGNCDC D+SQCVKKG+SY  D VET+ S+V  V+V   +AAE +G CKCG  CAC +C CG+
Sbjct:    3 TCGNCDCVDKSQCVKKGNSYGIDIVETEKSYVDEVIVA-AEAAEHDGKCKCGAACACTDCKCGN 65          
BLAST of CN185873 vs. ExPASy Swiss-Prot
Match: MT3_ACTDE (Metallothionein-like protein type 3 OS=Actinidia deliciosa GN=pKIWI503 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.682e-18
Identity = 44/65 (67.69%), Postives = 49/65 (75.38%), Query Frame = -2
Query:  297 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTC 491
            MSD CGNCDCAD SQCVKKG+S   D VETD S++  VV M V AAE+ G CKCG +C CVNCTC
Sbjct:    1 MSDKCGNCDCADSSQCVKKGNSI--DIVETDKSYIEDVV-MGVPAAESGGKCKCGTSCPCVNCTC 62          
BLAST of CN185873 vs. ExPASy Swiss-Prot
Match: MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium GN=MT1 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.685e-16
Identity = 38/65 (58.46%), Postives = 45/65 (69.23%), Query Frame = -2
Query:  297 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTC 491
            MS  C NCDC+D SQC KKG S+    VET+   + TV+ MD  AAE  GNCKCGP+CACV+C C
Sbjct:    1 MSSKCSNCDCSDSSQCTKKGYSFDLVIVETENRSMDTVI-MDAPAAENGGNCKCGPSCACVDCKC 64          
BLAST of CN185873 vs. ExPASy Swiss-Prot
Match: MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica GN=MT2 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.580e-16
Identity = 39/66 (59.09%), Postives = 46/66 (69.70%), Query Frame = -2
Query:  294 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 491
            MS  C NCDCAD +QCVKKG+SY    VET+   + TV V D  AAE +G CKCG  C+CV+CTCG
Sbjct:    1 MSGKCDNCDCADSTQCVKKGNSYDLVIVETENRSMDTVFV-DAPAAEHDGKCKCGTGCSCVSCTCG 65          
BLAST of CN185873 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSJ (Metallothionein-like protein 3A OS=Oryza sativa subsp. japonica GN=MT3A PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.740e-15
Identity = 36/66 (54.55%), Postives = 43/66 (65.15%), Query Frame = -2
Query:  294 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 491
            MSD CGNCDCAD+SQCVKKG+SY    VE + S        +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of CN185873 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica GN=MT3A PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.740e-15
Identity = 36/66 (54.55%), Postives = 43/66 (65.15%), Query Frame = -2
Query:  294 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 491
            MSD CGNCDCAD+SQCVKKG+SY    VE + S        +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of CN185873 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSJ (Metallothionein-like protein 3B OS=Oryza sativa subsp. japonica GN=MT3B PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.629e-13
Identity = 33/66 (50.00%), Postives = 41/66 (62.12%), Query Frame = -2
Query:  294 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 491
            MSD CGNCDCAD+SQCVKKG+SY    V+ + S     +  +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
BLAST of CN185873 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSI (Metallothionein-like protein 3B OS=Oryza sativa subsp. indica GN=MT3B PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.190e-13
Identity = 32/66 (48.48%), Postives = 41/66 (62.12%), Query Frame = -2
Query:  294 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 491
            MSD CG+CDCAD+SQCVKKG+SY    V+ + S     +  +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGHCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
The following BLAST results are available for this feature:
BLAST of CN185873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
MT3_CARPA1.736e-2369.70Metallothionein-like protein type 3 OS=Carica papa... [more]
MT3_MUSAC1.288e-1860.94Metallothionein-like protein type 3 OS=Musa acumin... [more]
MT3_ACTDE1.682e-1867.69Metallothionein-like protein type 3 OS=Actinidia d... [more]
MT3_PRUAV2.685e-1658.46Metallothionein-like protein 1 OS=Prunus avium GN=... [more]
MT3_MALDO4.580e-1659.09Metallothionein-like protein type 3 OS=Malus domes... [more]
MT3A_ORYSJ1.740e-1554.55Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3A_ORYSI1.740e-1554.55Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3B_ORYSJ1.629e-1350.00Metallothionein-like protein 3B OS=Oryza sativa su... [more]
MT3B_ORYSI6.190e-1348.48Metallothionein-like protein 3B OS=Oryza sativa su... [more]
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Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Properties
Property NameValue
Genbank descriptionUCRCS05_0002A01_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185873 ID=CN185873|Name=CN185873|organism=Citrus sinensis|type=EST|length=768bp
TTTTTTTTTTTTTTTTTGACTAACAATAATACATTAAAATTAAACCCCTT
AGGGCACGGGCATGGCCATGGCCATATATTACATGACTTTGAAGAAGGAA
ACACAAAACATTACGAGTGATGGGTGACACAACACGCACATCACTCCACA
CACTAGTAGTACACCATCATAAAAACGAAGTAGAGAATTTTTCTTTTTTT
TTAATCACCCTTACATTATTCTTAACCCCCACAATATTTAGGCACACTTG
CAGCTTCTTATTTTTTGCTGCATGTGTTTGCTTATTAGTGACTACCACAA
GTGCAGTTCACACAAGCGCAGGTGGGGCCGCACTTGCAGTTACCTTCAGT
CTCAGCAGCCTGAACGTCCATGACAACAACGGTGCTGACAAAGCTCAAGT
CAGTCTCGACGAAGTCAGCAGCATAGCTGCTTCCCTTCTTCACACACTGG
CTCCTGTCAGCGCAGTCGCAGTTGCCGCAGGTGTCCGACATGTTGATTGA
GCTTAGAACTTGGAATTTAAAACTGGAAATAGAGGGCTCTTTATTGTACG
AAACTTGATAAAAGCAAGTTTCCAATAGACAATTGTTTTCTCGCTAACAA
AACATAAGTTGGTTCACCAACTCTTCTTGCATACTACAAGGGAAAATCTA
AGCACAACCCTGCATGAGCAGGTAAGGCTCTGGATAATGTCTTGGAAACA
ATTTTATTTAAACTCAGACCCTCTACATAGAAACACAAACACCACATTTA
GCGCAAAGAAACACCACA
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