CN185871

Overview
NameCN185871
Unique NameCN185871
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length465
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig409 contig Csv1_Contig409:50..513. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CN185871 vs. ExPASy Swiss-Prot
Match: QCR8_SOLTU (Cytochrome b-c1 complex subunit 8 OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 3.683e-29
Identity = 58/72 (80.56%), Postives = 65/72 (90.28%), Query Frame = -1 
Query:  238 MGKQPVRMKAVVSPLSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQNYQEKEKLAHRY 453
            MGKQPV++KAVV  +SPFQQKIMPGLWKDL GKIHHKVS+NWIS  LLLGPLVGTY+YVQ++ EKEKL HRY
Sbjct:    1 MGKQPVKLKAVVYAISPFQQKIMPGLWKDLPGKIHHKVSENWISATLLLGPLVGTYSYVQHFLEKEKLEHRY 72
The following BLAST results are available for this feature:
BLAST of CN185871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
QCR8_SOLTU3.683e-2980.56Cytochrome b-c1 complex subunit 8 OS=Solanum tuber... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0001P24_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001P24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185871 ID=CN185871; Name=CN185871; organism=Citrus sinensis; type=EST; length=465bp
TTTTTTTTTTTTTTTTAGCAATCCATGCATCAAATTTATTTCATCCCCTA
TAAAGAGAAAATATTGCTCAGAATTTTGACAATAGTTCTCAATCCATCAA
CAAAACCCACAAATCAAACTACTGTAGTCTCAACTACATAGCAATTTCAA
TTATGTTTCACAACTTCAACAAGAGTTGTAGCTAATTCACAAGAACCTTA
AGCTTCTGAAAAAATAGAGGCACATCAGCTTGCTTCAATACCTGTGTGCC
AACTTCTCCTTCTCCTGGTAATTTTGGACATACGCGTAGGTGCCGACGAG
AGGACCGAGCAAAAGGATAGTGCTGATCCAATTATCGGAGACCTTGTGAT
GGATCTTACCGGTCAGATCCTTCCAAAGCCCCGGCATAATCTTTTGTTGA
AATGGCGACAGGGGGGACACCACCGCCTTCATTCTCACCGGCTGCTTTCC
CATGTCTTTTGATTT
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