CN185866

Overview
NameCN185866
Unique NameCN185866
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length452
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9392 contig Csv1_Contig9392:165..616. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185866 vs. ExPASy Swiss-Prot
Match: ILL5_ARATH (IAA-amino acid hydrolase ILR1-like 5 OS=Arabidopsis thaliana GN=ILL5 PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.086e-43
Identity = 82/134 (61.19%), Postives = 103/134 (76.87%), Query Frame = 1
Query:   49 MSFSKWVFVVFVLHLLNPCPVRFXXXXXXXXXXXDIPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPG 450
            MSF K V  V +LHLLN C +              IPK  L+ AKR++   WM+GIRR+IH+NPELGY+E ETS+L+++ELDKMG+ YK+PVAVTGV+G++GTG  PFVALRADMD+LP+QEMVEWE+KSKIPG
Sbjct:    1 MSFCKLVSFVLILHLLNSCLIS-----CSSNDLSQIPKNFLSLAKREDFFDWMVGIRRRIHENPELGYEEVETSKLVKTELDKMGVSYKNPVAVTGVIGYVGTGHAPFVALRADMDALPIQEMVEWEHKSKIPG 129          
BLAST of CN185866 vs. ExPASy Swiss-Prot
Match: ILL4_ARATH (IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsis thaliana GN=ILL4 PE=1 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 1.418e-43
Identity = 82/134 (61.19%), Postives = 101/134 (75.37%), Query Frame = 1
Query:   49 MSFSKWVFVVFVLHLLNPCPVRFXXXXXXXXXXXDIPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPG 450
            MSF KWV  V +LHLLNP  +              IP K L  AKR +   WM+GIRR+IH+NPELGY+E ETS+L+R+EL+KMG+ YK+PVAVTGVVG++GTG  PFVALRADMD+L +QEMVEWE+KSK+PG
Sbjct:    1 MSFFKWVSFVLILHLLNPTLIS-----CSSNGLSQIPSKFLTLAKRNDFFDWMVGIRRRIHENPELGYEEVETSKLVRAELEKMGVSYKYPVAVTGVVGYVGTGHAPFVALRADMDALAMQEMVEWEHKSKVPG 129          
BLAST of CN185866 vs. ExPASy Swiss-Prot
Match: ILL2_ARATH (IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsis thaliana GN=ILL2 PE=1 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 8.901e-38
Identity = 72/99 (72.73%), Postives = 87/99 (87.88%), Query Frame = 1
Query:  154 IPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPG 450
            I  KLL FAK  E+  WM+ IRRKIH+NPELGY+E ETS+LIRSEL+ +GIKY++PVA+TGV+G+IGTGEPPFVALRADMD+LP+QE VEWE+KSKI G
Sbjct:   34 IQTKLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEPPFVALRADMDALPIQEGVEWEHKSKIAG 132          
BLAST of CN185866 vs. ExPASy Swiss-Prot
Match: ILL1_ORYSJ (IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. japonica GN=ILL1 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.285e-36
Identity = 68/100 (68.00%), Postives = 82/100 (82.00%), Query Frame = 1
Query:  151 DIPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPG 450
            D P  LL  AK  E  GWM+G+RR+IH+NPELGY+EF TS+L+R ELD +GI Y+HP AVTGVV  +GTG PPFVALRADMD+LP+QE VEWE+KSK+PG
Sbjct:   31 DDPAGLLRRAKEAEFAGWMVGLRRRIHENPELGYEEFATSELVRRELDALGIPYRHPFAVTGVVATVGTGGPPFVALRADMDALPMQESVEWEHKSKVPG 130          
BLAST of CN185866 vs. ExPASy Swiss-Prot
Match: ILL1_ORYSI (IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. indica GN=ILL1 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.285e-36
Identity = 68/100 (68.00%), Postives = 82/100 (82.00%), Query Frame = 1
Query:  151 DIPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPG 450
            D P  LL  AK  E  GWM+G+RR+IH+NPELGY+EF TS+L+R ELD +GI Y+HP AVTGVV  +GTG PPFVALRADMD+LP+QE VEWE+KSK+PG
Sbjct:   31 DDPAGLLRRAKEAEFAGWMVGLRRRIHENPELGYEEFATSELVRRELDALGIPYRHPFAVTGVVATVGTGGPPFVALRADMDALPMQESVEWEHKSKVPG 130          
BLAST of CN185866 vs. ExPASy Swiss-Prot
Match: ILL1_ARATH (IAA-amino acid hydrolase ILR1-like 1 OS=Arabidopsis thaliana GN=ILL1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.421e-35
Identity = 68/99 (68.69%), Postives = 83/99 (83.84%), Query Frame = 1
Query:  154 IPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPG 450
            IP   L  AK  E+   M+ IRRKIH+NPELGY+EFETS+ IRSELD +G+KY+ PVA+TG++G+IGTGEPPFVALRADMD+LP+QE VEWE+KSK PG
Sbjct:   33 IPINFLELAKSPEVFDSMVRIRRKIHENPELGYEEFETSKFIRSELDLIGVKYRFPVAITGIIGYIGTGEPPFVALRADMDALPIQEAVEWEHKSKNPG 131          
BLAST of CN185866 vs. ExPASy Swiss-Prot
Match: ILR1_ARATH (IAA-amino acid hydrolase ILR1 OS=Arabidopsis thaliana GN=ILR1 PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 3.276e-32
Identity = 70/134 (52.24%), Postives = 88/134 (65.67%), Query Frame = 1
Query:   49 MSFSKWVFVVFVLHLLNPCPVRFXXXXXXXXXXXDIPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPG 450
            M FS   FV+FV     P P+              + + +L+ AK  E   WM GIRRKIH+NPE G+QEF+TSQL+R ELD +G+KYK+PVA TGVV +IG+   P   LRADMD+LPLQE+VEWE KSK+ G
Sbjct:    1 MDFSGSFFVIFVTFFFLP-PLSSAGSYDSGSGLESLARGMLHSAKDPEFFEWMRGIRRKIHENPETGFQEFKTSQLVRDELDSLGVKYKYPVAKTGVVAWIGSCSKPVFGLRADMDALPLQELVEWESKSKVDG 133          
BLAST of CN185866 vs. ExPASy Swiss-Prot
Match: ILL2_ORYSJ (IAA-amino acid hydrolase ILR1-like 2 OS=Oryza sativa subsp. japonica GN=ILL2 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 5.230e-30
Identity = 57/93 (61.29%), Postives = 75/93 (80.65%), Query Frame = 1
Query:  166 LLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKI 444
            +L+ A+R E   WM G+R  IH+ PEL ++E ETS+L+R+ELD MG+ Y+HPVA TGVV  +GTG PPFVALRADMD+LP+QE V+WE+KSK+
Sbjct:   50 VLDRARRPEFAAWMAGVRWAIHERPELAFEEIETSRLVRAELDAMGVAYRHPVAGTGVVATVGTGRPPFVALRADMDALPMQEEVQWEHKSKV 142          
BLAST of CN185866 vs. ExPASy Swiss-Prot
Match: ILL6_ORYSJ (IAA-amino acid hydrolase ILR1-like 6 OS=Oryza sativa subsp. japonica GN=ILL6 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.522e-29
Identity = 58/97 (59.79%), Postives = 74/97 (76.29%), Query Frame = 1
Query:  160 KKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPG 450
            +++   A R E   W+  +RR+IH+ PEL Y+E ETS+L+R ELD MG+ ++HPVA TGVV  IGTG PP VALRADMD+LP+QE VEWE+KSK PG
Sbjct:   97 EEIAGMAGRPETAAWLRAVRRRIHERPELAYEEVETSRLVRDELDAMGVGFRHPVARTGVVANIGTGRPPVVALRADMDALPIQEAVEWEHKSKNPG 193          
BLAST of CN185866 vs. ExPASy Swiss-Prot
Match: ILL6_ARATH (IAA-amino acid hydrolase ILR1-like 6 OS=Arabidopsis thaliana GN=ILL6 PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 6.393e-28
Identity = 54/96 (56.25%), Postives = 77/96 (80.21%), Query Frame = 1
Query:  163 KLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPG 450
            ++L    + + V W+  +RR IH+NPEL ++E+ETS+LIRSELD+MGI Y++P+A TG+  +IG+G PPFVA+RADMD+LP+QE VEWE+ SK+ G
Sbjct:   75 EILRLTYQPDNVAWLKRVRRTIHENPELAFEEYETSRLIRSELDRMGIMYRYPLAKTGIRAWIGSGGPPFVAVRADMDALPIQEAVEWEHISKVAG 170          
The following BLAST results are available for this feature:
BLAST of CN185866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
ILL5_ARATH1.086e-4361.19IAA-amino acid hydrolase ILR1-like 5 OS=Arabidopsi... [more]
ILL4_ARATH1.418e-4361.19IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsi... [more]
ILL2_ARATH8.901e-3872.73IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsi... [more]
ILL1_ORYSJ1.285e-3668.00IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sati... [more]
ILL1_ORYSI1.285e-3668.00IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sati... [more]
ILL1_ARATH1.421e-3568.69IAA-amino acid hydrolase ILR1-like 1 OS=Arabidopsi... [more]
ILR1_ARATH3.276e-3252.24IAA-amino acid hydrolase ILR1 OS=Arabidopsis thali... [more]
ILL2_ORYSJ5.230e-3061.29IAA-amino acid hydrolase ILR1-like 2 OS=Oryza sati... [more]
ILL6_ORYSJ1.522e-2959.79IAA-amino acid hydrolase ILR1-like 6 OS=Oryza sati... [more]
ILL6_ARATH6.393e-2856.25IAA-amino acid hydrolase ILR1-like 6 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001P21_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001P21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185866 ID=CN185866; Name=CN185866; organism=Citrus sinensis; type=EST; length=452bp
GAGGATTCCTCATTTTGTTCTTGGAAATCGAAACTTATGGGTGGAGCCAT
GAGTTTCTCGAAGTGGGTCTTCGTAGTTTTTGTTCTTCATTTGCTCAATC
CATGTCCTGTTAGATTCTCGTATGGCTCTTCAAGCTCAAATGGGTTATCG
GATATTCCAAAAAAGTTGCTTAATTTTGCAAAAAGACAAGAGCTTGTTGG
CTGGATGATTGGTATCAGGAGAAAAATACATCAGAATCCAGAACTGGGCT
ATCAGGAATTTGAGACTAGTCAGCTTATTAGATCAGAATTGGATAAAATG
GGTATTAAATACAAACACCCGGTAGCAGTAACTGGTGTTGTTGGTTTTAT
TGGGACTGGTGAGCCTCCTTTTGTTGCATTGAGAGCAGATATGGATTCTC
TTCCTCTGCAGGAAATGGTTGAGTGGGAGTACAAGAGTAAAATTCCTGGG
AA
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