CN185845
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODF_SOYBN (Superoxide dismutase [Fe], chloroplastic OS=Glycine max GN=SODB PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 7.186e-63 Identity = 96/170 (56.47%), Postives = 112/170 (65.88%), Query Frame = 1 Query: 190 KTGGQISAKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTP 699 K G +++AKFELKPPPYPLN LEP MS+ TLEFHWGKHH+ YV+NL KQ+VGTEL DGKSLE++++ SYNKGD+LPAFNNAAQ WNHDFFW LIERDFGS TQFGSGWAWL Y+ P P E D L+V+K+P Sbjct: 18 KEGPKVNAKFELKPPPYPLNGLEPVMSQQTLEFHWGKHHKTYVENLKKQVVGTEL-DGKSLEEIIVTSYNKGDILPAFNNAAQVWNHDFFWECMKPGGGGKPSGELLELIERDFGSFVKFLDEFKAAAATQFGSGWAWLAYRARKFDGENVANPPSPDE-DNKLVVLKSP 185 HSP 2 Score: 62.3882 bits (150), Expect = 7.186e-63 Identity = 29/33 (87.88%), Postives = 29/33 (87.88%), Query Frame = 2 Query: 698 PNAVNPLVWD-YSSLLTIDVWEHAYYLDFQNRR 793 PNAVNPLVW Y LLTIDVWEHAYYLDFQNRR Sbjct: 185 PNAVNPLVWGGYYPLLTIDVWEHAYYLDFQNRR 217
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODF_NICPL (Superoxide dismutase [Fe], chloroplastic (Fragment) OS=Nicotiana plumbaginifolia GN=SODB PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.218e-45 Identity = 93/171 (54.39%), Postives = 104/171 (60.82%), Query Frame = 1 Query: 214 KFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPQCCQSSCLG 726 KFEL+PPPYP++ALEPHMS T EFHWGKHHRAYVDNLNKQI GTEL DGK+LED+++ +YNKG LPAFNNAAQAWNH FFW LI RDFGS TQFGSGWAWL YK ++K L +VKTP LG Sbjct: 1 KFELQPPPYPMDALEPHMSSRTFEFHWGKHHRAYVDNLNKQIDGTEL-DGKTLEDIILVTYNKGAPLPAFNNAAQAWNHQFFWESMKPNGGGEPSGELLELINRDFGSYDAFVKEFKAAAATQFGSGWAWLAYK----------------PEEKKLALVKTPNAENPLVLG 154
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODF_ARATH (Superoxide dismutase [Fe], chloroplastic OS=Arabidopsis thaliana GN=SODB PE=1 SV=4) HSP 1 Score: 172.94 bits (437), Expect = 1.758e-42 Identity = 87/174 (50.00%), Postives = 104/174 (59.77%), Query Frame = 1 Query: 205 ISAKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPQCCQSSCLG 726 ++A + LKPPP+ L+ALEPHMSK TLEFHWGKHHRAYVDNL KQ++GTEL +GK LE ++ ++YN GDLLPAFNNAAQAWNH+FFW L+ERDF S TQFG+GWAWL Y ++ L VVKTP LG Sbjct: 7 VTANYVLKPPPFALDALEPHMSKQTLEFHWGKHHRAYVDNLKKQVLGTEL-EGKPLEHIIHSTYNNGDLLPAFNNAAQAWNHEFFWESMKPGGGGKPSGELLALLERDFTSYEKFYEEFNAAAATQFGAGWAWLAY------------------SNEKLKVVKTPNAVNPLVLG 161
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODF_ANASP (Superoxide dismutase [Fe] OS=Anabaena sp. (strain PCC 7120) GN=sodB PE=3 SV=3) HSP 1 Score: 117.472 bits (293), Expect = 5.054e-35 Identity = 61/132 (46.21%), Postives = 73/132 (55.30%), Query Frame = 1 Query: 217 FELKPPPYPLNALEPH-MSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 609 F +P PY NALE + M +T E+H+GKHH+AYVDNLNK GTEL D KSLE+V+ ++ FNNAAQ WNH FFW I +DFGS TQFGSGWAWL+ Sbjct: 3 FVQEPLPYDFNALEQYGMKGETFEYHYGKHHKAYVDNLNKLTDGTELAD-KSLEEVIQIAFKDASKAGIFNNAAQVWNHTFFWNSLKPAGGGAPTGEFAAKINQDFGSFDKLKEEFSNAAATQFGSGWAWLI 133 HSP 2 Score: 51.2174 bits (121), Expect = 5.054e-35 Identity = 21/32 (65.62%), Postives = 25/32 (78.12%), Query Frame = 2 Query: 698 PNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRR 793 PNA NPL +LLT+DVWEHAYY+DF+N R Sbjct: 145 PNAENPLAHGQKALLTLDVWEHAYYIDFRNAR 176
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODF_PLEBO (Superoxide dismutase [Fe] OS=Plectonema boryanum GN=sodB PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 9.253e-34 Identity = 57/132 (43.18%), Postives = 71/132 (53.79%), Query Frame = 1 Query: 217 FELKPPPYPLNALEPH-MSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 609 F P P+P +ALEP+ M +T ++H+GKHH AYV NLNK + GT + + SLEDV+ S+ + FNNAAQ WNH FFW I+ FGS TQFGSGWAWLV Sbjct: 3 FTQPPLPFPKDALEPYGMKAETFDYHYGKHHAAYVTNLNKLVEGTPM-ESLSLEDVIKQSFGDSSKVGVFNNAAQVWNHTFFWNCLKAGGGGAPTGELAAKIDAAFGSLDKFKEEFSNAAATQFGSGWAWLV 133 HSP 2 Score: 54.299 bits (129), Expect = 9.253e-34 Identity = 24/32 (75.00%), Postives = 25/32 (78.12%), Query Frame = 2 Query: 698 PNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRR 793 PNA NPLV LLT+DVWEHAYYLDFQN R Sbjct: 145 PNAENPLVHGQKPLLTLDVWEHAYYLDFQNAR 176
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODF_SYNY3 (Superoxide dismutase [Fe] OS=Synechocystis sp. (strain PCC 6803) GN=sodB PE=1 SV=3) HSP 1 Score: 112.079 bits (279), Expect = 4.517e-33 Identity = 58/125 (46.40%), Postives = 66/125 (52.80%), Query Frame = 1 Query: 235 PYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 609 PY ALEP +SK TLEFH KHH AYV+N N + GT+L D +S+EDV+ A FNNAAQAWNH F+W I DFGS TQFGSGWAWLV Sbjct: 9 PYDYTALEPCISKSTLEFHHDKHHAAYVNNFNNAVAGTDL-DNQSIEDVIKAVAGDASKAGIFNNAAQAWNHSFYWNCMKPGGGGQPSGALADKINADFGSFDAFVEAFKQAGATQFGSGWAWLV 132 HSP 2 Score: 50.0618 bits (118), Expect = 4.517e-33 Identity = 21/31 (67.74%), Postives = 25/31 (80.65%), Query Frame = 2 Query: 701 NAVNPLVWDYSSLLTIDVWEHAYYLDFQNRR 793 NA NP+ + LLT+DVWEHAYYLD+QNRR Sbjct: 145 NAENPMTAGQTPLLTMDVWEHAYYLDYQNRR 175
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODF_LEGPH (Superoxide dismutase [Fe] OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=sodB PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 3.096e-31 Identity = 58/131 (44.27%), Postives = 73/131 (55.73%), Query Frame = 1 Query: 217 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 609 F L PY L+AL PH+SK+TLE+H+GKHH YV NLNK I GTE + +LE++++ + KG + FNNAAQ WNH F+W I + FGS T FGSGWAWLV Sbjct: 3 FTLPQLPYALDALAPHVSKETLEYHYGKHHNTYVTNLNKLIPGTEF-ESMTLEEIIMKA--KGGI---FNNAAQVWNHTFYWHSMSPNGGGEPKGRLAEAINKSFGSFAAFKEQFSQTAATTFGSGWAWLV 127 HSP 2 Score: 45.0542 bits (105), Expect = 3.096e-31 Identity = 18/31 (58.06%), Postives = 24/31 (77.42%), Query Frame = 2 Query: 701 NAVNPLVWDYSSLLTIDVWEHAYYLDFQNRR 793 NA P+ ++LLT DVWEHAYY+D++NRR Sbjct: 141 NAGTPMTEGLNALLTCDVWEHAYYIDYRNRR 171
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODF_SYNE7 (Superoxide dismutase [Fe] OS=Synechococcus elongatus (strain PCC 7942) GN=sodB PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.891e-31 Identity = 55/131 (41.98%), Postives = 68/131 (51.91%), Query Frame = 1 Query: 217 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 609 +EL P+ AL P+++K+TLEFH KHH AYV+N N + T+L DG+ +E V+ A FNNAAQAWNH F+W I DFGS TQFGSGWAWLV Sbjct: 3 YELPALPFDYTALAPYITKETLEFHHDKHHAAYVNNYNNAVKDTDL-DGQPIEAVIKAIAGDASKAGLFNNAAQAWNHSFYWNSIKPNGGGAPTGALADKIAADFGSFENFVTEFKQAAATQFGSGWAWLV 132 HSP 2 Score: 48.9062 bits (115), Expect = 8.891e-31 Identity = 21/31 (67.74%), Postives = 24/31 (77.42%), Query Frame = 2 Query: 701 NAVNPLVWDYSSLLTIDVWEHAYYLDFQNRR 793 NA P+ + LLTIDVWEHAYYLD+QNRR Sbjct: 145 NADTPIAHGQTPLLTIDVWEHAYYLDYQNRR 175
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODF_SALTY (Superoxide dismutase [Fe] OS=Salmonella typhimurium GN=sodB PE=3 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 7.358e-30 Identity = 57/131 (43.51%), Postives = 69/131 (52.67%), Query Frame = 1 Query: 217 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 609 FEL PY +AL PH+S +TLE+H+GKHH+ YV NLN I GT +GKSLE++V S +G + FNNAAQ WNH F+W I FGS FGSGW WLV Sbjct: 3 FELPALPYAKDALAPHISAETLEYHYGKHHQTYVTNLNNLIKGTAF-EGKSLEEIVRTS--EGGI---FNNAAQVWNHTFYWNCLAPNAGGEPTGKLADAIAASFGSFAEFKAQFTDAAIKNFGSGWTWLV 127 HSP 2 Score: 46.9802 bits (110), Expect = 7.358e-30 Identity = 19/31 (61.29%), Postives = 24/31 (77.42%), Query Frame = 2 Query: 701 NAVNPLVWDYSSLLTIDVWEHAYYLDFQNRR 793 NA PL D + LLT+DVWEHAYY+D++N R Sbjct: 141 NAGTPLTTDATPLLTVDVWEHAYYIDYRNAR 171
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODF_SALTI (Superoxide dismutase [Fe] OS=Salmonella typhi GN=sodB PE=3 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 7.358e-30 Identity = 57/131 (43.51%), Postives = 69/131 (52.67%), Query Frame = 1 Query: 217 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 609 FEL PY +AL PH+S +TLE+H+GKHH+ YV NLN I GT +GKSLE++V S +G + FNNAAQ WNH F+W I FGS FGSGW WLV Sbjct: 3 FELPALPYAKDALAPHISAETLEYHYGKHHQTYVTNLNNLIKGTAF-EGKSLEEIVRTS--EGGI---FNNAAQVWNHTFYWNCLAPNAGGEPTGKLADAIAASFGSFAEFKAQFTDAAIKNFGSGWTWLV 127 HSP 2 Score: 46.9802 bits (110), Expect = 7.358e-30 Identity = 19/31 (61.29%), Postives = 24/31 (77.42%), Query Frame = 2 Query: 701 NAVNPLVWDYSSLLTIDVWEHAYYLDFQNRR 793 NA PL D + LLT+DVWEHAYY+D++N R Sbjct: 141 NAGTPLTTDATPLLTVDVWEHAYYIDYRNAR 171 The following BLAST results are available for this feature:
BLAST of CN185845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185845 ID=CN185845; Name=CN185845; organism=Citrus sinensis; type=EST; length=793bpback to top |