CN185834
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185834 vs. ExPASy Swiss-Prot
Match: C3H40_ARATH (Zinc finger CCCH domain-containing protein 40 OS=Arabidopsis thaliana GN=At3g21810 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.008e-21 Identity = 67/176 (38.07%), Postives = 91/176 (51.70%), Query Frame = 1 Query: 4 RIKELETQLQKDKEESKRIASKIKKFVKAHNRHSQMQDELKRSQARLQKLGYHLGLDATKVGGNEEDSSINIMSDEETTNYHL---VDPQNEKQTIPSPNKKKLHVDRDTTNGFVPEANLTKDGGRVAE---------------SVHLKEVSRWNQHPTNHGSVADESKLKGKNVS 477 RI+ELETQL ++K+E +RI S KKFVK +NR + QD+LKRS+ARLQKLG L GN D ++I+SDEET +L DP NE Q S ++KK +VD+ TT V + + + E S +E WN T + S + E K + S Sbjct: 186 RIQELETQLDREKDECRRITSSSKKFVKEYNRFLRAQDDLKRSEARLQKLGNQLSTYLAGSEGNNRDVGLDIVSDEETNGRNLRTACDPHNELQNTSSLSRKKHYVDQYTTKEPVEDGLIGRGEEEKVENEKKRPPCWNMLSSKSYSEEESGAWNDEDTINRSSSKEDNWKRRRFS 361
BLAST of CN185834 vs. ExPASy Swiss-Prot
Match: C3H13_ORYSJ (Zinc finger CCCH domain-containing protein 13 OS=Oryza sativa subsp. japonica GN=Os02g0161200 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.862e-18 Identity = 67/201 (33.33%), Postives = 99/201 (49.25%), Query Frame = 1 Query: 4 RIKELETQLQKDKEESKRIASKIKKFVKAHNRHSQMQDELKRSQARLQKLGYHLGLDATKVGGNEEDSSINIMSDEETTNYHLVDPQNEKQTIPSPN-------KKKLHVDRDTT------NGFVPEANLTKDGGRVAESVHLKEVSRWNQHPTNHGSVADESKLKGKNVSTSWFSAQAKNVRSANALALPSTGIAAHVND 567 ++ +LE QL+++K+E R+ SK+KKF+KAH R + Q+E+KRSQAR ++LG L D K G NEE SS+N +E + N +K++IP KK+ D DT V + + T G +S++LK+ W + G+ K+KG V LPSTG+AAH D Sbjct: 190 KVNDLEVQLRREKDECHRMTSKMKKFIKAHARFLKAQEEVKRSQARFERLGDLLASDILKRGANEEGSSVNEDLNERSPN----TAATKKRSIPYSTSEEAKAVKKRRERDSDTMTRSDKYRSDVTDFDKTSKGTEATKSLYLKK-KLWEDEKSKLGANIFTEKVKGSPVRH----------------VLPSTGMAAHAID 369 The following BLAST results are available for this feature:
BLAST of CN185834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185834 ID=CN185834; Name=CN185834; organism=Citrus sinensis; type=EST; length=696bpback to top |