CN185831
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPR4_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic OS=Arabidopsis thaliana GN=CLPR4 PE=1 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 1.377e-45 Identity = 88/96 (91.67%), Postives = 90/96 (93.75%), Query Frame = 1 Query: 151 YWYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 Y +KNRIVYLGMS VPSVTELILAEFLYLQYED EKPIYLYINSTGTTK GEKLGY+TEAFAIYDVMGYVKPPIFTLCVGNAWGEA LLL AGAKG Sbjct: 109 YLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGYDTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKG 204 HSP 2 Score: 67.3958 bits (163), Expect = 2.826e-11 Identity = 33/60 (55.00%), Postives = 41/60 (68.33%), Query Frame = 3 Query: 3 SDFSGLRLRPDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASVLVQESNCLLG 182 SD G +LR + LNP +F SKP+ V+TMVIPF+ G+A EQPPPDLAS L + LG Sbjct: 60 SDLCGAKLRAESLNPLNFSSSKPKRGVVTMVIPFSKGSAHEQPPPDLASYLFKNRIVYLG 119
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPR_SYNE7 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechococcus elongatus (strain PCC 7942) GN=clpR PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.533e-25 Identity = 54/104 (51.92%), Postives = 70/104 (67.31%), Query Frame = 1 Query: 160 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 K RI+YLGM S VTELI+A+ LYL++++ EKPIY YINSTGT+ G+ +GYETEAFAI D M Y+KPP+ T+C+G A G A ++L G G Sbjct: 31 KERIIYLGMPLFSSDDVKRQVGFDVTELIIAQLLYLEFDNPEKPIYFYINSTGTSWYTGDAIGYETEAFAICDTMRYIKPPVHTICIGQAMGTAAMILSGGTPG 134 HSP 2 Score: 27.335 bits (59), Expect = 5.533e-25 Identity = 11/28 (39.29%), Postives = 17/28 (60.71%), Query Frame = 3 Query: 99 PFTSGTAWEQPPPDLASVLVQESNCLLG 182 P+ ++ PPPDL S+L++E LG Sbjct: 11 PYYGDVSYRTPPPDLPSLLLKERIIYLG 38
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPR_SYNY3 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp. (strain PCC 6803) GN=clpR PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 5.535e-25 Identity = 54/104 (51.92%), Postives = 72/104 (69.23%), Query Frame = 1 Query: 160 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 K RIVYLGM S VT+LI+A+ LYLQ++D +KPIY YINSTGT+ G+ +G+ETEAFAI D + Y+KPP+ T+C+G A G A ++L +G KG Sbjct: 29 KERIVYLGMPLFSSDEVKQQVGIDVTQLIIAQLLYLQFDDPDKPIYFYINSTGTSWYTGDAVGFETEAFAICDTLNYIKPPVHTICIGQAMGTAAMILSSGTKG 132 HSP 2 Score: 25.7942 bits (55), Expect = 5.535e-25 Identity = 11/22 (50.00%), Postives = 16/22 (72.73%), Query Frame = 3 Query: 117 AWEQPPPDLASVLVQESNCLLG 182 A++ PPPDL S+L++E LG Sbjct: 15 AFKTPPPDLESLLLKERIVYLG 36
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPR3_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic OS=Arabidopsis thaliana GN=CLPR3 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 6.650e-24 Identity = 54/92 (58.70%), Postives = 71/92 (77.17%), Query Frame = 1 Query: 166 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 RIVY+GM VP+VTEL++AE +YLQ+ D ++PIY+YINSTGTT+ GE +G E+E FAIYD + +K + T+CVG A G+A LLL AG KG Sbjct: 130 RIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKG 221
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPR1_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic OS=Arabidopsis thaliana GN=CLPR1 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 4.461e-20 Identity = 48/92 (52.17%), Postives = 66/92 (71.74%), Query Frame = 1 Query: 166 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 RI YLGM VP+VTEL++A+F++L Y++ KPIYLYINS GT + E +G ETEA+AI D + Y K ++T+ G A+G+A +LL G KG Sbjct: 180 RICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEKMETVGSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKG 271
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP2_GLOVI (ATP-dependent Clp protease proteolytic subunit 2 OS=Gloeobacter violaceus GN=clpP2 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.747e-18 Identity = 46/91 (50.55%), Postives = 59/91 (64.84%), Query Frame = 1 Query: 166 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 RIVYLG V EL++A+ LYL+ ED KPI +YINS G G+ET AFA+YD M +V+ PI T+C+G A G + LL+ AG KG Sbjct: 37 RIVYLGTPINDVVAELLIAQLLYLESEDNAKPIEIYINSPGVA------GFETSAFAVYDTMRHVRMPIKTICLGLAGGFSALLMAAGTKG 121 HSP 2 Score: 23.8682 bits (50), Expect = 8.747e-18 Identity = 10/27 (37.04%), Postives = 15/27 (55.56%), Query Frame = 3 Query: 102 FTSGTAWEQPPPDLASVLVQESNCLLG 182 ++ + PPPDL S+L+ E LG Sbjct: 16 YSGDYGFRTPPPDLPSLLLNERIVYLG 42
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_THEPX (ATP-dependent Clp protease proteolytic subunit OS=Thermoanaerobacter sp. (strain X514) GN=clpP PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.908e-16 Identity = 45/93 (48.39%), Postives = 57/93 (61.29%), Query Frame = 1 Query: 160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 K+RIV+LG + L++A+ L+L+ ED +K I+LYINS G G T FAIYD M Y+KP + TLCVG A A LL AGAKG Sbjct: 26 KDRIVFLGEEINDTTASLVIAQLLFLEAEDPDKDIWLYINSPG--------GSITAGFAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKG 110
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_THEP3 (ATP-dependent Clp protease proteolytic subunit OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=clpP PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.908e-16 Identity = 45/93 (48.39%), Postives = 57/93 (61.29%), Query Frame = 1 Query: 160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 K+RIV+LG + L++A+ L+L+ ED +K I+LYINS G G T FAIYD M Y+KP + TLCVG A A LL AGAKG Sbjct: 26 KDRIVFLGEEINDTTASLVIAQLLFLEAEDPDKDIWLYINSPG--------GSITAGFAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKG 110
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_THETN (ATP-dependent Clp protease proteolytic subunit OS=Thermoanaerobacter tengcongensis GN=clpP PE=3 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 2.533e-15 Identity = 44/93 (47.31%), Postives = 56/93 (60.22%), Query Frame = 1 Query: 160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 K+RIV+LG + L++A+ L+L+ ED +K I+LYINS G G T AIYD M Y+KP + TLCVG A A LL AGAKG Sbjct: 26 KDRIVFLGDEINDTTASLVIAQMLFLEAEDPDKDIWLYINSPG--------GSITAGLAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKG 110
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_FUSNN (ATP-dependent Clp protease proteolytic subunit OS=Fusobacterium nucleatum subsp. nucleatum GN=clpP PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 3.308e-15 Identity = 42/93 (45.16%), Postives = 56/93 (60.22%), Query Frame = 1 Query: 160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 K+RI+++G + +V I+A+ LYL+ ED EK I +YINS G G T+ AIYD M Y+KP + T+CVG A LL AGAKG Sbjct: 25 KDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPG--------GSVTDGMAIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKG 109 The following BLAST results are available for this feature:
BLAST of CN185831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 408
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185831 ID=CN185831; Name=CN185831; organism=Citrus sinensis; type=EST; length=438bpback to top |