DC900047
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900047 vs. ExPASy Swiss-Prot
Match: COBL6_ARATH (COBRA-like protein 6 OS=Arabidopsis thaliana GN=COBL6 PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 3.102e-22 Identity = 47/61 (77.05%), Postives = 53/61 (86.89%), Query Frame = 3 Query: 27 GXSGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLPDDYPRLPNNAHTAASSSA 209 G GNVQTE+LL KD G FTFREGW FPRRILFNGDECVMP PDD+PRLP +AH+++SSSA Sbjct: 374 GKIGNVQTELLLKKDMGNFTFREGWAFPRRILFNGDECVMPSPDDFPRLPKSAHSSSSSSA 434
BLAST of DC900047 vs. ExPASy Swiss-Prot
Match: COBL6_ORYSJ (COBRA-like protein 6 OS=Oryza sativa subsp. japonica GN=BC1L7 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.543e-16 Identity = 37/59 (62.71%), Postives = 45/59 (76.27%), Query Frame = 3 Query: 27 GXSGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLPDDYPRLPNNAHTAASS 203 G GNVQ+E+L+ KD+ FTFR+GW FPR++ FNGDEC MP PD YP LPN A AA+S Sbjct: 376 GPHGNVQSEVLMRKDARTFTFRQGWAFPRKVYFNGDECQMPPPDSYPYLPNAAPPAAAS 434
BLAST of DC900047 vs. ExPASy Swiss-Prot
Match: COBL4_ARATH (COBRA-like protein 4 OS=Arabidopsis thaliana GN=COBL4 PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 9.664e-16 Identity = 34/53 (64.15%), Postives = 43/53 (81.13%), Query Frame = 3 Query: 27 GXSGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLPDDYPRLPNNA 185 G SGNVQ+E+LL KD FTF++GW FPR++ FNGDEC++P PD YP LPN+A Sbjct: 359 GPSGNVQSEVLLQKDQKTFTFKQGWAFPRKVYFNGDECMLPPPDSYPFLPNSA 411
BLAST of DC900047 vs. ExPASy Swiss-Prot
Match: COBRA_ARATH (Protein COBRA OS=Arabidopsis thaliana GN=COB PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.264e-15 Identity = 35/54 (64.81%), Postives = 39/54 (72.22%), Query Frame = 3 Query: 18 SKPGXSGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLPDDYPRLPN 179 S+ G GNVQ+E+L KD FTF +GW FPRRI FNGD CVMP PD YP LPN Sbjct: 378 SEAGPLGNVQSEILFRKDQSTFTFEKGWAFPRRIYFNGDNCVMPPPDSYPFLPN 431
BLAST of DC900047 vs. ExPASy Swiss-Prot
Match: COBL1_ARATH (COBRA-like protein 1 OS=Arabidopsis thaliana GN=COBL1 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 7.986e-15 Identity = 35/60 (58.33%), Postives = 42/60 (70.00%), Query Frame = 3 Query: 27 GXSGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLPDDYPRLPN-NAHTAASS 203 G GNVQ+E+L K++ FTF +GW FPRRI FNGD CVMP PD YP LPN +H + S Sbjct: 376 GPFGNVQSELLFQKEASAFTFEKGWAFPRRIYFNGDNCVMPPPDSYPWLPNTGSHKSVGS 435 HSP 2 Score: 20.7866 bits (42), Expect = 7.986e-15 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 2 Query: 2 YNDMLLQAG 28 YND+L+QAG Sbjct: 368 YNDLLMQAG 376
BLAST of DC900047 vs. ExPASy Swiss-Prot
Match: COBL5_ORYSJ (COBRA-like protein 5 OS=Oryza sativa subsp. japonica GN=BC1 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.069e-14 Identity = 34/53 (64.15%), Postives = 40/53 (75.47%), Query Frame = 3 Query: 27 GXSGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLPDDYPRLPNNA 185 G GNVQ+E+L+ KD FTF +GW FPR+I FNGDEC MP PD YP LPN+A Sbjct: 393 GPFGNVQSEVLMRKDYNTFTFSQGWAFPRKIYFNGDECKMPPPDSYPYLPNSA 445
BLAST of DC900047 vs. ExPASy Swiss-Prot
Match: COBL5_ORYSI (COBRA-like protein 5 OS=Oryza sativa subsp. indica GN=BC1 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.069e-14 Identity = 34/53 (64.15%), Postives = 40/53 (75.47%), Query Frame = 3 Query: 27 GXSGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLPDDYPRLPNNA 185 G GNVQ+E+L+ KD FTF +GW FPR+I FNGDEC MP PD YP LPN+A Sbjct: 393 GPFGNVQSEVLMRKDYNTFTFSQGWAFPRKIYFNGDECKMPPPDSYPYLPNSA 445
BLAST of DC900047 vs. ExPASy Swiss-Prot
Match: COBL2_ARATH (COBRA-like protein 2 OS=Arabidopsis thaliana GN=COBL2 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 3.109e-14 Identity = 36/62 (58.06%), Postives = 43/62 (69.35%), Query Frame = 3 Query: 18 SKPGXSGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLPDDYPRLPNNAHTAASS 203 S+ G GNVQ+E+L K+ FTF +GW FPRRI FNGD CVMP PD YP LPN + A+S Sbjct: 364 SQAGPVGNVQSELLFQKNPLEFTFEKGWAFPRRIYFNGDNCVMPPPDSYPWLPNASPNIATS 425
BLAST of DC900047 vs. ExPASy Swiss-Prot
Match: COBL1_ORYSJ (COBRA-like protein 1 OS=Oryza sativa subsp. japonica GN=BC1L6 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.109e-14 Identity = 35/59 (59.32%), Postives = 40/59 (67.80%), Query Frame = 3 Query: 27 GXSGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLPDDYPRLPNNAHTAASS 203 G GNVQ+E+L KD FTF +GW FPRR+ FNGD CVMP PD YP LPN + SS Sbjct: 369 GPDGNVQSELLFKKDPKSFTFEKGWAFPRRVYFNGDNCVMPPPDAYPWLPNASTRVMSS 427
BLAST of DC900047 vs. ExPASy Swiss-Prot
Match: COBL7_ORYSJ (COBRA-like protein 7 OS=Oryza sativa subsp. japonica GN=BC1LP1 PE=3 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 4.060e-14 Identity = 35/58 (60.34%), Postives = 40/58 (68.97%), Query Frame = 3 Query: 36 GNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLPDDYPRLPNNAHTAASSSA 209 GNVQTEM+L KD FTF GW FPRR+ F+G ECVMP PD YP LPN + S+A Sbjct: 365 GNVQTEMILKKDKSDFTFSGGWAFPRRVYFDGHECVMPPPDQYPLLPNGGPDSRVSAA 422 The following BLAST results are available for this feature:
BLAST of DC900047 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900047 ID=DC900047; Name=DC900047; organism=Citrus sinensis; type=EST; length=565bpback to top |