DC900045
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900045 vs. ExPASy Swiss-Prot
Match: GEM1_CRYNE (Mitochondrial Rho GTPase 1 OS=Cryptococcus neoformans GN=GEM1 PE=3 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 2.932e-31 Identity = 78/187 (41.71%), Postives = 109/187 (58.29%), Query Frame = 2 Query: 20 DQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESPWDEAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGYGGDPA------AALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGKSALLNSFLERPFS------ENYAPTTGEQYAVNVVDQPGGNKKTLILQE 544 D SVEL+ +FL IF YD D DGA+ EL+DLF T+P +PW + D T +G +TL+G++++W++ TLL+ R +L L Y+GY PA AL VTR R DR++++ RNVF C + G +GK++LL SF+ RPF Y PTT VN V+ G +K L+LQE Sbjct: 333 DCSVELSPLGNQFLTDIFEAYDKDQDGALSQNELDDLFSTSPGNPWLSQGFPDTTITDDMGRVTLQGWLAQWSMTTLLNHRTTLNYLAYLGYSSSPATDLPTPTALHVTRPRKQDRRQRKVTRNVFLCYVLGATGSGKTSLLRSFVNRPFKGGEDGLGGYEPTTKVLSVVNSVEME-GVEKYLVLQE 518
BLAST of DC900045 vs. ExPASy Swiss-Prot
Match: GEM1_CANGA (Mitochondrial Rho GTPase 1 OS=Candida glabrata GN=GEM1 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.234e-30 Identity = 76/189 (40.21%), Postives = 114/189 (60.32%), Query Frame = 2 Query: 17 PDQ-SVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESP--WDEAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGYGGDPAAALRVTRKRSVDRKKQQ------TERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEE 556 P+Q SVEL+S+ FL IF +D DNDGA+ EL LF + P P W E + + A G +TL+G++++W + T LD + + A L+Y+G+ D A+++T+ R + R++ + T+R VF C + G +N+GKS+LL SFL R FSE Y+PT + AVN V+ G + LILQE E+ Sbjct: 310 PEQASVELSSKGYRFLVDIFIKFDSDNDGALNDTELHTLFRSTPGLPNLWLETNFPASTVVNAKGFVTLQGWLAQWTMTTYLDYKITTAYLVYLGFQEDAKLAVQITKSRRMRRRQGRLYRSYVTDRKVFNCFVVGKRNSGKSSLLESFLGRLFSEAYSPTIRPRVAVNNVEVTGDKQYYLILQEFGEQ 498
BLAST of DC900045 vs. ExPASy Swiss-Prot
Match: GEM1_GIBZE (Mitochondrial Rho GTPase 1 OS=Gibberella zeae GN=GEM1 PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.034e-28 Identity = 69/183 (37.70%), Postives = 107/183 (58.47%), Query Frame = 2 Query: 26 SVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESP--WDEAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGYG-GDP----AAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPE 553 S EL+ F +F ++D DNDG + ELE LF AP P W ++ + + G++TL+G++++W++ T ++P+ ++ L Y+G+ +P AAL++T+ R + + ERNV C + G AGKSALL+SFL RPF Y PT + AVN V+ PGG + LIL+E+ E Sbjct: 299 SAELSPAGYRFFVDLFLIFDKDNDGGLNDEELEALFAPAPGLPSSWTDSSFPSSTVRNEAGHVTLQGWLAQWSMTTFIEPKTTIEYLAYLGFEPSNPKDSITAALKITKPRKRRSRLGRVERNVVLCYVLGASGAGKSALLDSFLNRPFYGLYHPTIKPRRAVNSVELPGGKQVYLILEELGE 481
BLAST of DC900045 vs. ExPASy Swiss-Prot
Match: MIRO2_CHICK (Mitochondrial Rho GTPase 2 OS=Gallus gallus GN=RHOT2 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 8.828e-28 Identity = 76/189 (40.21%), Postives = 103/189 (54.50%), Query Frame = 2 Query: 8 KLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESPWDEAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGYG-----GDPAAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGKSALLNSFLERPF-SENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEE 556 +L P S EL +FL+ +F +D D DGA+ PAEL++ F P PW Y TT G L+L GF+ +W L+ LD RH L L Y+GY AL VTR++ +D +K QT+RNVF C + G + AGKSA L +FL R ++ +P Y +N V Q G +K LIL E+ E Sbjct: 292 RLPPGCSTELNHLGYQFLQRLFEKHDKDQDGALSPAELQNFFSVFPCMPWGPELYNTVC-TTDKGLLSLHGFLCQWTLIAYLDVRHCLECLGYLGYPILSEQDSQTQALTVTREKRIDLEKGQTQRNVFLCKVLGARGAGKSAFLQAFLGRSLAAQRESPGEPSPYTINTV-QVNGQEKYLILHEVSAE 478
BLAST of DC900045 vs. ExPASy Swiss-Prot
Match: GEM1_ASHGO (Mitochondrial Rho GTPase 1 OS=Ashbya gossypii GN=GEM1 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.967e-27 Identity = 70/190 (36.84%), Postives = 103/190 (54.21%), Query Frame = 2 Query: 11 LSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESP--WDEAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGYGGDPAAALRVTRKRSVDRKK------QQTERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEE 556 ++ SVEL+ FL +F +D DNDG + EL LF P P W E + + G +TL+G+++ W++ T +D + + L+Y+G+ D AL VTR R R+ +R VF C + G N+GKS+LL SFL RPFSE Y+PT + AVN ++ GG + LILQE ++ Sbjct: 316 ITDTSSVELSPLGYRFLVDVFLAFDKDNDGGLNEDELNVLFKCTPGLPKLWSETCFPYSTVVNNRGFITLQGWLAHWSMTTFIDYKTTTEYLVYLGFEKDAKLALHVTRARRKRRRNGIFYRAPVNDRKVFNCYILGKPNSGKSSLLESFLGRPFSETYSPTIRPKIAVNSLELKGGKQYYLILQEFGQQ 505
BLAST of DC900045 vs. ExPASy Swiss-Prot
Match: GEM1_YEAST (Mitochondrial Rho GTPase 1 OS=Saccharomyces cerevisiae GN=GEM1 PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.382e-27 Identity = 72/194 (37.11%), Postives = 107/194 (55.15%), Query Frame = 2 Query: 2 PTKLSPD-QSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESP--WDEAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGYGGDPAAALRVTRKRSVDRKKQQ------TERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEE 556 P + PD SVEL+ + FL IF +DIDNDG + EL LF P P W + + G +TL+G++++W++ T L+ + A L+Y G+ D AL+VT+ R + R+ + +R VF C + G GKS+LL +FL R FSE Y+PT + AVN ++ GG + LILQE+ E+ Sbjct: 315 PRLVVPDTSSVELSPKGYRFLVDIFLKFDIDNDGGLNNQELHRLFKCTPGLPKLWTSTNFPFSTVVNNKGCITLQGWLAQWSMTTFLNYSTTTAYLVYFGFQEDARLALQVTKPRKMRRRSGKLYRSNINDRKVFNCFVIGKPCCGKSSLLEAFLGRSFSEEYSPTIKPRIAVNSLELKGGKQYYLILQELGEQ 508
BLAST of DC900045 vs. ExPASy Swiss-Prot
Match: GEM1_ASPOR (Mitochondrial Rho GTPase 1 OS=Aspergillus oryzae GN=gem1 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 7.474e-27 Identity = 70/190 (36.84%), Postives = 103/190 (54.21%), Query Frame = 2 Query: 8 KLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESP--WDEAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGYGGDP------AAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPE 553 ++ P S EL+ E F +F L D DNDG + AEL LF P P W + + + G++TL+G++++W++ T P+ +L L Y+G+ AAL+VTR R ++ + RNV + GP +GKSALL++FL R FS Y PT + AVN V+ PGG + LIL E+ E Sbjct: 294 EVPPYASAELSPEGYRFFVNLFLLSDKDNDGGLNDAELASLFAPTPGLPASWADGSFPSSTVRNEAGHVTLQGWLAQWSMTTFTSPKTTLEYLAYLGFESSDRSNPSTTAALKVTRPRKRRKRPGRVGRNVVLGHVLGPPGSGKSALLDAFLARGFSTTYHPTIQPRTAVNTVELPGGKQCYLILDELGE 483
BLAST of DC900045 vs. ExPASy Swiss-Prot
Match: GEM1_NEUCR (Mitochondrial Rho GTPase 1 OS=Neurospora crassa GN=gem-1 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 9.761e-27 Identity = 67/183 (36.61%), Postives = 100/183 (54.64%), Query Frame = 2 Query: 26 SVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESP--WDEAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGYGGDPA-----AALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPE 553 S EL+ F +F +D DNDG + EL LF P P W E + G++TL+G++++W++ T L+P+ +L L Y+G+ A AAL++T+ R R+ + +RNV C + G AGKS+LL+ FL RPF Y PT + AVN V+ GG + LIL+E+ E Sbjct: 300 SAELSPAGYRFFMDLFLTFDKDNDGGLNDRELAALFAPTPGLPHSWAETSFPSTTVRNEAGHITLQGWLAQWSMTTFLEPKTTLEYLAYLGFETPNARETTTAALKITKPRKRRRRPGRVDRNVVLCYILGSSGAGKSSLLDVFLNRPFDTLYHPTIKPRQAVNSVELQGGKQCYLILEELGE 482
BLAST of DC900045 vs. ExPASy Swiss-Prot
Match: GEM1_ASPFU (Mitochondrial Rho GTPase 1 OS=Aspergillus fumigatus GN=gem1 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.709e-26 Identity = 69/190 (36.32%), Postives = 102/190 (53.68%), Query Frame = 2 Query: 8 KLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESP--WDEAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGYGGDP------AAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPE 553 ++ P S EL+ E F +F L D DNDG + AEL LF P P W + + + G++TL+G++++W++ T P+ +L L Y+G+ AAL+VTR R ++ + RNV + G +GKSALL++FL R FS Y PT + AVN V+ PGG + LIL E+ E Sbjct: 294 EVPPFASAELSPEGYRFFVNLFLLSDKDNDGGLNDAELASLFAPTPGLPASWADGSFPSSTVRNEAGHVTLQGWLAQWSMTTFQSPKTTLEYLAYLGFESSDRSNPSTTAALKVTRPRKKRKRPGRVGRNVVLGHVLGAPGSGKSALLDAFLARGFSHTYRPTIQPRTAVNTVELPGGKQCYLILDELGE 483
BLAST of DC900045 vs. ExPASy Swiss-Prot
Match: MIRO2_BOVIN (Mitochondrial Rho GTPase 2 OS=Bos taurus GN=RHOT2 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 6.327e-26 Identity = 72/194 (37.11%), Postives = 107/194 (55.15%), Query Frame = 2 Query: 2 PTKLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESPWDEAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGY-----GGDPAAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQ--YAVNVVDQPGGNKKTLILQEIPEEGV 562 P ++ P S EL +F++ +F +D D DGA+ PAEL+ LF P +PW P+ + T G L L G++ +W L+T LD R SL +L Y+GY A A+ VTR++ +D++K QT+RNV C + G + GKS+ L +FL A GE YA++ V Q G +K LIL E+ + + Sbjct: 290 PLRVPPGCSAELNHRGYQFVQRMFEKHDQDRDGALSPAELQSLFSVFPAAPW--GPHLPSTVRTKAGRLPLHGYLCQWTLVTYLDVRRSLEHLGYLGYPTLCEQDSQAHAITVTREKRLDQEKGQTQRNVLLCKVVGARGVGKSSFLRAFLGHSLGHQDA---GEPSVYAIDTV-QVNGQEKYLILCEVAADSL 477 The following BLAST results are available for this feature:
BLAST of DC900045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900045 ID=DC900045; Name=DC900045; organism=Citrus sinensis; type=EST; length=579bpback to top |