DC900039
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900039 vs. ExPASy Swiss-Prot
Match: CNOT3_MOUSE (CCR4-NOT transcription complex subunit 3 OS=Mus musculus GN=Cnot3 PE=1 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 8.348e-42 Identity = 83/153 (54.25%), Postives = 100/153 (65.36%), Query Frame = 3 Query: 183 DQMYNMQMLESAFYKLPQPKDSERARSYIPRHPAVTPPSYPQVQAPIVSNPAFWERLSLDSYGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVANDEFEQGTYVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLED 641 +Q+Y M E+A++ +P P DSER R Y+PR+P TPP + Q+ P F++RLS T+TLFF FYY + T QYLAAK LKKQSWR+H KY WFQRHEEPK DEFEQGTY+YFD+ W QR K FTFEY YLED Sbjct: 608 EQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTVEFYQRLS-----TETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDY--------EKWGQRKKEGFTFEYRYLED 747
BLAST of DC900039 vs. ExPASy Swiss-Prot
Match: CNOT3_HUMAN (CCR4-NOT transcription complex subunit 3 OS=Homo sapiens GN=CNOT3 PE=1 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 8.348e-42 Identity = 83/153 (54.25%), Postives = 100/153 (65.36%), Query Frame = 3 Query: 183 DQMYNMQMLESAFYKLPQPKDSERARSYIPRHPAVTPPSYPQVQAPIVSNPAFWERLSLDSYGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVANDEFEQGTYVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLED 641 +Q+Y M E+A++ +P P DSER R Y+PR+P TPP + Q+ P F++RLS T+TLFF FYY + T QYLAAK LKKQSWR+H KY WFQRHEEPK DEFEQGTY+YFD+ W QR K FTFEY YLED Sbjct: 610 EQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTVEFYQRLS-----TETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDY--------EKWGQRKKEGFTFEYRYLED 749
BLAST of DC900039 vs. ExPASy Swiss-Prot
Match: NOT3_SCHPO (General negative regulator of transcription subunit 3 OS=Schizosaccharomyces pombe GN=not3 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.435e-33 Identity = 67/139 (48.20%), Postives = 86/139 (61.87%), Query Frame = 3 Query: 228 LPQPKDSERARSYIPRHPAVTPPSYPQVQAPIVSNPAFWERLSLDSYGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVANDEFEQGTYVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDE 644 +P D+ + + YIP+ P P YPQ P+ + E + DTLF+ FYY+ TYQQY+A +ELKKQSWR+H+KY TWFQRHEEPK+ DEFE G+Y YFDF + W QR K +F F Y YLED+ Sbjct: 499 VPDATDAAKPQYYIPKDPYPVPHYYPQQPLPLFDSSEMTELVD-----PDTLFYMFYYRPGTYQQYIAGQELKKQSWRFHKKYTTWFQRHEEPKMITDEFESGSYRYFDF-------EGDWVQRKKADFRFTYQYLEDD 625 The following BLAST results are available for this feature:
BLAST of DC900039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900039 ID=DC900039; Name=DC900039; organism=Citrus sinensis; type=EST; length=772bpback to top |