CN185783

Overview
NameCN185783
Unique NameCN185783
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length652
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185783 vs. ExPASy Swiss-Prot
Match: CML30_ARATH (Probable calcium-binding protein CML30 OS=Arabidopsis thaliana GN=CML30 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.742e-28
Identity = 69/144 (47.92%), Postives = 91/144 (63.19%), Query Frame = -3
Query:   54 DEKSKQASFNKKEHDDES-------------LSRDEVEMVMRKLTLFCSFEDEELPQKLGSAELSWLFXXXXXXXXXXXEAFDVFDENKDGFIDAMELQRLLCILGLKEGFELENCKKMIKTFDKNGDGRIDFKEFVKFMEKSF 446
            + K +Q +  K+E DD+              +SR+E EMVMR L LF  + D++L ++  + E+S LF           +AFDVFDENKDGFIDA+ELQR+L ILG K+G  L+NC  MI++ D N DG+IDF EFVKFME SF
Sbjct:   52 NNKDQQETLTKQEDDDDDDDDDDDDDDDDIDISREEAEMVMRSLGLF--YNDDQLQEQYSAKEVSSLFEEKEASLEEVKQAFDVFDENKDGFIDAIELQRVLTILGFKQGSYLDNCLVMIRSLDGNKDGKIDFNEFVKFMETSF 193          
BLAST of CN185783 vs. ExPASy Swiss-Prot
Match: CML45_ARATH (Probable calcium-binding protein CML45 OS=Arabidopsis thaliana GN=CML45 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 6.618e-28
Identity = 69/146 (47.26%), Postives = 93/146 (63.70%), Query Frame = -3
Query:   54 QSCKSRNWDEKSKQASFNK-------KEHDDESLSRDEVEMVMRKLTLFCSFEDEELPQKLGSAELSWLFXXXXXXXXXXXEAFDVFDENKDGFIDAMELQRLLCILGLKEGFELENCKKMIKTFDKNGDGRIDFKEFVKFMEKSF 470
            Q C S   ++KSK   F         ++ DD+ L R++V MVM+ L L    E+E L ++  S E+S LF           +AFDVFDEN+DGFID ++LQR+L ILGLK+G  LENC++MI++FD + DGRIDF  FVKFME +F
Sbjct:   61 QQCVS---EKKSKDLEFQTSIKHEEYRDDDDDGLCREDVGMVMKSLGLSTDQENEGLQKQYSSKEVSNLFEEKEPSLEEVKQAFDVFDENRDGFIDPIDLQRVLTILGLKQGSNLENCRRMIRSFDGSKDGRIDFYGFVKFMENNF 203          
BLAST of CN185783 vs. ExPASy Swiss-Prot
Match: CML47_ARATH (Probable calcium-binding protein CML47 OS=Arabidopsis thaliana GN=CML47 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.439e-14
Identity = 37/64 (57.81%), Postives = 50/64 (78.12%), Query Frame = -3
Query:   54 AFDVFDENKDGFIDAMELQRLLCILGLKEGFELENCKKMIKTFDKNGDGRIDFKEFVKFMEKSF 245
            AF +FDEN+DGFID  EL+ +L +LG  E  ++E C+KM+K +D+N DG+IDF EFVK +EKSF
Sbjct:  120 AFRLFDENQDGFIDENELKHVLSLLGYDECTKME-CRKMVKVYDENRDGKIDFYEFVKLIEKSF 182          
BLAST of CN185783 vs. ExPASy Swiss-Prot
Match: CML7_ARATH (Calmodulin-like protein 7 OS=Arabidopsis thaliana GN=CML7 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.340e-12
Identity = 34/61 (55.74%), Postives = 47/61 (77.05%), Query Frame = -3
Query:   63 AFDVFDENKDGFIDAMELQRLLCILGLKEGFELENCKKMIKTFDKNGDGRIDFKEFVKFME 245
            AF+VFD+N DGFI   EL+ +L  LGLK+G  L++CKKMIK  D +GDGR+++KEF + M+
Sbjct:   83 AFNVFDQNGDGFITVDELKAVLSSLGLKQGKTLDDCKKMIKKVDVDGDGRVNYKEFRQMMK 143          
BLAST of CN185783 vs. ExPASy Swiss-Prot
Match: CML3_ARATH (Calmodulin-like protein 3 OS=Arabidopsis thaliana GN=CML3 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.750e-12
Identity = 33/61 (54.10%), Postives = 46/61 (75.41%), Query Frame = -3
Query:   63 AFDVFDENKDGFIDAMELQRLLCILGLKEGFELENCKKMIKTFDKNGDGRIDFKEFVKFME 245
            AF+VFD+N+DGFI   EL+ +L  LGLK+G  LE+CK+MI   D +GDG ++FKEF + M+
Sbjct:   82 AFNVFDQNRDGFITVEELRSVLASLGLKQGRTLEDCKRMISKVDVDGDGMVNFKEFKQMMK 142          
BLAST of CN185783 vs. ExPASy Swiss-Prot
Match: CML42_ARATH (Calcium-binding protein CML42 OS=Arabidopsis thaliana GN=CML42 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.091e-12
Identity = 37/67 (55.22%), Postives = 44/67 (65.67%), Query Frame = -3
Query:   45 AFDVFDENKDGFIDAMELQRLLCILGLKEGFELENCKKMIKTFDKNGDGRIDFKEFVKFMEKSFVES 245
            AF VFDEN DGFI A ELQ +L  LGL EG E+E  +KMI + D+N DGR+DF EF   M    + S
Sbjct:  124 AFKVFDENGDGFISARELQTVLKKLGLPEGGEMERVEKMIVSVDRNQDGRVDFFEFKNMMRTVVIPS 190          
BLAST of CN185783 vs. ExPASy Swiss-Prot
Match: CML5_ARATH (Calmodulin-like protein 5 OS=Arabidopsis thaliana GN=CML5 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 8.683e-12
Identity = 31/61 (50.82%), Postives = 46/61 (75.41%), Query Frame = -3
Query:   63 AFDVFDENKDGFIDAMELQRLLCILGLKEGFELENCKKMIKTFDKNGDGRIDFKEFVKFME 245
            AF+VFD++ DGFI   EL+ ++  LGLK+G  L+ CKKMI   D +GDGR+++KEF++ M+
Sbjct:  147 AFNVFDQDGDGFITVEELKSVMASLGLKQGKTLDGCKKMIMQVDADGDGRVNYKEFLQMMK 207          
BLAST of CN185783 vs. ExPASy Swiss-Prot
Match: CML43_ARATH (Probable calcium-binding protein CML43 OS=Arabidopsis thaliana GN=CML43 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.134e-11
Identity = 36/67 (53.73%), Postives = 46/67 (68.66%), Query Frame = -3
Query:   45 AFDVFDENKDGFIDAMELQRLLCILGLKEGFELENCKKMIKTFDKNGDGRIDFKEFVKFMEKSFVES 245
            AF+VFDE+ DGFI A+ELQ++L  LGL E  E+E  +KMI + D N DGR+DF EF   M+   V S
Sbjct:  115 AFNVFDEDGDGFISAVELQKVLKKLGLPEAGEIEQVEKMIVSVDSNHDGRVDFFEFKNMMQTVVVPS 181          
BLAST of CN185783 vs. ExPASy Swiss-Prot
Match: CML28_ORYSJ (Probable calcium-binding protein CML28 OS=Oryza sativa subsp. japonica GN=CML28 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.481e-11
Identity = 32/60 (53.33%), Postives = 43/60 (71.67%), Query Frame = -3
Query:   66 AFDVFDENKDGFIDAMELQRLLCILGLKEGFELENCKKMIKTFDKNGDGRIDFKEFVKFM 245
            AF+VFD+N DGFI   EL+ +L  LGLK G   ++C++MI   D +GDGR+DFKEF + M
Sbjct:  103 AFNVFDQNGDGFITVDELRSVLSSLGLKHGRTADDCRRMISMVDADGDGRVDFKEFKQMM 162          
BLAST of CN185783 vs. ExPASy Swiss-Prot
Match: CML6_ARATH (Calmodulin-like protein 6 OS=Arabidopsis thaliana GN=CML6 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.934e-11
Identity = 33/62 (53.23%), Postives = 44/62 (70.97%), Query Frame = -3
Query:   60 AFDVFDENKDGFIDAMELQRLLCILGLKEGFELENCKKMIKTFDKNGDGRIDFKEFVKFMEK 245
            AF+VFD N DGFI   EL+ +L  LGLK+G  LE C+KMI   D +GDGR+++ EF + M+K
Sbjct:   85 AFNVFDRNGDGFITVDELKAVLSSLGLKQGKTLEECRKMIMQVDVDGDGRVNYMEFRQMMKK 146          
The following BLAST results are available for this feature:
BLAST of CN185783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
CML30_ARATH1.742e-2847.92Probable calcium-binding protein CML30 OS=Arabidop... [more]
CML45_ARATH6.618e-2847.26Probable calcium-binding protein CML45 OS=Arabidop... [more]
CML47_ARATH5.439e-1457.81Probable calcium-binding protein CML47 OS=Arabidop... [more]
CML7_ARATH1.340e-1255.74Calmodulin-like protein 7 OS=Arabidopsis thaliana ... [more]
CML3_ARATH1.750e-1254.10Calmodulin-like protein 3 OS=Arabidopsis thaliana ... [more]
CML42_ARATH5.091e-1255.22Calcium-binding protein CML42 OS=Arabidopsis thali... [more]
CML5_ARATH8.683e-1250.82Calmodulin-like protein 5 OS=Arabidopsis thaliana ... [more]
CML43_ARATH1.134e-1153.73Probable calcium-binding protein CML43 OS=Arabidop... [more]
CML28_ORYSJ1.481e-1153.33Probable calcium-binding protein CML28 OS=Oryza sa... [more]
CML6_ARATH1.934e-1153.23Calmodulin-like protein 6 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001N20_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001N20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185783 ID=CN185783; Name=CN185783; organism=Citrus sinensis; type=EST; length=652bp
ATGATCAAGTTCTGTACTTTTATTTATTTTTCAGAAATGAGTTATGATTC
AACAAAGCTCTTCTCCATAAACTTTACAAATTCCTTAAAATCTATCCTTC
CATCTCCATTTTTATCAAAAGTTTTGATCATTTTCTTGCAATTCTCCAGC
TCAAATCCCTCTTTCAAGCCCAAAATACAGAGCAATCTCTGCAACTCCAT
GGCATCAATGAAGCCATCTTTGTTCTCATCAAACACATCAAAAGCTTCTT
TCACCTCCTCCAAGCTTGGCTCTTTCTCCTCAAACAACCACGAAAGCTCA
GCAGAACCCAGCTTCTGTGGAAGCTCCTCATCTTCAAAGCTGCAAAAAAG
TGTCAACTTTCGCATGACCATTTCCACTTCATCTCTAGAGAGACTCTCAT
CATCATGTTCCTTCTTATTGAAGGAAGCTTGTTTGCTCTTCTCATCCCAA
TTTCTTGACTTACAAGACTGAACGGATTGGAGAAAAGAACTATACAATAA
AAACCTATAAGACAATATAACCTGAATGAATGCAGAAAATTGATTAAAGG
GGTGTTGGTTCTTTTTTGCTGATGATTTCAATTTCTTCAAAACATCTCCC
ACAATTTTGTTTACGAGTTGTGCCTCAGACCTGATTGTCATGGAATCCCA
TC
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