CN185728
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: RUBB_PEA (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Pisum sativum PE=1 SV=2) HSP 1 Score: 207.608 bits (527), Expect = 5.186e-53 Identity = 111/120 (92.50%), Postives = 115/120 (95.83%), Query Frame = 1 Query: 337 LVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSELADVAAVS 696 L P+ VLESKYG+PKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALV+ELK+MSKEVEDSELADVAAVS Sbjct: 80 LGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVAELKKMSKEVEDSELADVAAVS 199 HSP 2 Score: 78.9518 bits (193), Expect = 2.782e-14 Identity = 41/59 (69.49%), Postives = 46/59 (77.97%), Query Frame = 3 Query: 216 RRARTPKIYA-AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVCSREQVRCPK 389 R+ R K+ A AK+LHFNKDG A+KKLQNGVNKLADLVGVTLGPKGRNV + PK Sbjct: 39 RKNRNVKVSAMAKELHFNKDGSAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPK 97
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: RUBB_BRANA (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.668e-51 Identity = 107/120 (89.17%), Postives = 114/120 (95.00%), Query Frame = 1 Query: 337 LVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSELADVAAVS 696 L P+ VLESKYG+P+IVNDGVTVA+EVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQG IAEGVKVVAAGANPVLITRGIEKT+KALV+ELK+MSKEVEDSELADVAAVS Sbjct: 86 LGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVAELKKMSKEVEDSELADVAAVS 205 HSP 2 Score: 102.449 bits (254), Expect = 2.350e-21 Identity = 60/112 (53.57%), Postives = 69/112 (61.61%), Query Frame = 3 Query: 60 MASTFTAMSSISSMIAPNGRMTDXXXXXXXXXXXXXXXXXXXXFGRRQSV--ALRRARTPKIYAAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVCSREQVRCPK 389 MASTFTA SSI SM+APN TD FGRRQ+V LRR+ + AAK+LHFNKDG ++KLQ GVNKLADLVGVTLGPKGRNV + P+ Sbjct: 1 MASTFTATSSIGSMVAPNAHKTDKKLMNKLSSSS---------FGRRQNVFPKLRRSSPAVVCAAKELHFNKDGTTIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPR 103
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: RUBB_ARATH (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Arabidopsis thaliana GN=At1g55490 PE=1 SV=3) HSP 1 Score: 202.601 bits (514), Expect = 1.668e-51 Identity = 107/120 (89.17%), Postives = 114/120 (95.00%), Query Frame = 1 Query: 337 LVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSELADVAAVS 696 L P+ VLESKYG+P+IVNDGVTVA+EVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQG IAEGVKVVAAGANPVLITRGIEKT+KALV+ELK+MSKEVEDSELADVAAVS Sbjct: 86 LGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVTELKKMSKEVEDSELADVAAVS 205 HSP 2 Score: 101.293 bits (251), Expect = 5.234e-21 Identity = 59/112 (52.68%), Postives = 69/112 (61.61%), Query Frame = 3 Query: 60 MASTFTAMSSISSMIAPNGRMTDXXXXXXXXXXXXXXXXXXXXFGRRQSVALRRARTPK--IYAAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVCSREQVRCPK 389 MASTFTA SSI SM+APNG +D FGRRQSV R R+ + AAK+LHFNKDG +++LQ GVNKLADLVGVTLGPKGRNV + P+ Sbjct: 1 MASTFTATSSIGSMVAPNGHKSDKKLISKLSSSS---------FGRRQSVCPRPRRSSSAIVCAAKELHFNKDGTTIRRLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPR 103
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: RUBB_SECCE (RuBisCO large subunit-binding protein subunit beta, chloroplastic (Fragment) OS=Secale cereale GN=CPN60 PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 6.140e-46 Identity = 97/104 (93.27%), Postives = 102/104 (98.08%), Query Frame = 1 Query: 385 PKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSELADVAAVS 696 P+IVNDGVTVA+EVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKV+AAGANPV ITRGIEKT+KALV ELK+MSKEVEDSELADVAAVS Sbjct: 1 PQIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVIAAGANPVQITRGIEKTAKALVLELKKMSKEVEDSELADVAAVS 104
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_LACH4 (60 kDa chaperonin OS=Lactobacillus helveticus (strain DPC 4571) GN=groL PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.407e-37 Identity = 71/119 (59.66%), Postives = 89/119 (74.79%), Query Frame = 1 Query: 343 PRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED-SELADVAAVS 696 P+ VLE YG P I NDGVT+AK +EL+D EN+GAKLV +AA KTND+AGDGTTT+ VL Q ++ EG+K V AGANPV I RGIEK +KA V EL ++S +VE ++A+VAAVS Sbjct: 32 PKGRNVVLEQSYGNPDITNDGVTIAKSIELKDRYENMGAKLVAEAAQKTNDIAGDGTTTATVLTQAIVREGMKNVTAGANPVGIRRGIEKATKAAVDELHKISHKVESKDQIANVAAVS 150 HSP 2 Score: 41.5874 bits (96), Expect = 1.407e-37 Identity = 21/38 (55.26%), Postives = 28/38 (73.68%), Query Frame = 3 Query: 246 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNV 359 AKD+ F+++ A + L GV+KLAD V T+GPKGRNV Sbjct: 2 AKDIKFSEN--ARRSLLKGVDKLADTVKTTIGPKGRNV 37
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_LACAC (60 kDa chaperonin OS=Lactobacillus acidophilus GN=groL PE=3 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 4.051e-37 Identity = 72/119 (60.50%), Postives = 88/119 (73.95%), Query Frame = 1 Query: 343 PRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSE-LADVAAVS 696 P+ VLE YG P I NDGVT+AK +EL+D EN+GAKLV +AA KTND+AGDGTTT+ VL Q + EG+K V AGANPV I RGIEK +KA V EL ++S +VE E +A+VAAVS Sbjct: 32 PKGRNVVLEQSYGNPDITNDGVTIAKSIELKDHYENMGAKLVAEAAQKTNDIAGDGTTTATVLTQAIAREGMKNVTAGANPVGIRRGIEKATKAAVDELHKISHKVESKEQIANVAAVS 150 HSP 2 Score: 40.4318 bits (93), Expect = 4.051e-37 Identity = 21/38 (55.26%), Postives = 27/38 (71.05%), Query Frame = 3 Query: 246 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNV 359 AKD+ F ++ A + L GV+KLAD V T+GPKGRNV Sbjct: 2 AKDIKFAEN--ARRSLLKGVDKLADTVKTTIGPKGRNV 37
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_LACHE (60 kDa chaperonin OS=Lactobacillus helveticus GN=groL PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.052e-37 Identity = 71/119 (59.66%), Postives = 88/119 (73.95%), Query Frame = 1 Query: 343 PRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED-SELADVAAVS 696 P+ VLE YG P I NDGVT+AK +EL+D EN+GAKLV +AA KTND+AGDGTTT+ VL Q + EG+K V AGANPV I RGIEK +KA V EL ++S +VE ++A+VAAVS Sbjct: 32 PKGRNVVLEQSYGNPDITNDGVTIAKSIELKDRYENMGAKLVAEAAQKTNDIAGDGTTTATVLTQAIAREGMKNVTAGANPVGIRRGIEKATKAAVDELHKISHKVESKDQIANVAAVS 150 HSP 2 Score: 41.5874 bits (96), Expect = 4.052e-37 Identity = 21/38 (55.26%), Postives = 28/38 (73.68%), Query Frame = 3 Query: 246 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNV 359 AKD+ F+++ A + L GV+KLAD V T+GPKGRNV Sbjct: 2 AKDIKFSEN--ARRSLLKGVDKLADTVKTTIGPKGRNV 37
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH602_ANAVT (60 kDa chaperonin 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=groL2 PE=3 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 7.523e-36 Identity = 73/124 (58.87%), Postives = 100/124 (80.65%), Query Frame = 1 Query: 325 LELPLVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSELADVAAVS 696 +++ L P+ +LE KYG P+IVNDG+TVAKE+ELEDP+EN GA+L+++ AAKT D+AGDGTTT+ VL Q LI EG+K VAAG+NPV + RGI+KT++ALV+E+ +++K VE S +A VA VS Sbjct: 26 VKITLGPKGRNVLLEKKYGTPQIVNDGITVAKEIELEDPLENTGARLIQEVAAKTKDVAGDGTTTATVLVQALIKEGLKNVAAGSNPVSLKRGIDKTTEALVAEIAKVAKPVEGSAIAQVATVS 149
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_STRAG (60 kDa chaperonin OS=Streptococcus agalactiae GN=groL PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 9.671e-36 Identity = 69/121 (57.02%), Postives = 88/121 (72.73%), Query Frame = 1 Query: 337 LVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSE-LADVAAVS 696 L P+ VLE +G+P I NDGVT+AKE+ELED EN+GAKLV + A+KTND+AGDGTTT+ VL Q ++ EG+K V AGANP+ I RGIE A V ELK++++ V E +A VAAVS Sbjct: 30 LGPKGRNVVLEKAFGSPLITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLPQAIVREGLKNVTAGANPIGIRRGIETAVSAAVEELKEIAQPVSGKEAIAQVAAVS 150 HSP 2 Score: 39.6614 bits (91), Expect = 9.671e-36 Identity = 22/38 (57.89%), Postives = 26/38 (68.42%), Query Frame = 3 Query: 246 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNV 359 AKD+ F+ D A + GV+ LAD V VTLGPKGRNV Sbjct: 2 AKDIKFSAD--ARSAMVRGVDILADTVFVTLGPKGRNV 37
BLAST of CN185728 vs. ExPASy Swiss-Prot
Match: CH60_LACZE (60 kDa chaperonin OS=Lactobacillus zeae GN=groL PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.641e-35 Identity = 70/121 (57.85%), Postives = 90/121 (74.38%), Query Frame = 1 Query: 337 LVPRAGMFVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DSELADVAAVS 696 L P+ VL+ YG+P+I NDGVT+AK ++LED EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANPV I GIEK +KA V EL ++S +V E+A VA+VS Sbjct: 30 LGPKGRNVVLDKSYGSPEITNDGVTIAKSIDLEDHYENMGAKLVAEVASKTNDIAGDGTTTATVLAQSIIREGMKNVTAGANPVGIRTGIEKATKAAVDELHKISHKVNGKKEIAQVASVS 150 HSP 2 Score: 36.965 bits (84), Expect = 1.641e-35 Identity = 19/38 (50.00%), Postives = 27/38 (71.05%), Query Frame = 3 Query: 246 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNV 359 AK++ F++D A + GV++LA+ V TLGPKGRNV Sbjct: 2 AKEIKFSEDARAA--MLRGVDQLANTVKTTLGPKGRNV 37 The following BLAST results are available for this feature:
BLAST of CN185728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185728 ID=CN185728; Name=CN185728; organism=Citrus sinensis; type=EST; length=698bpback to top |