CN185702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185702 vs. ExPASy Swiss-Prot
Match: ATL5H_ARATH (RING-H2 finger protein ATL5H OS=Arabidopsis thaliana GN=ATL5H PE=2 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 4.237e-30 Identity = 82/224 (36.61%), Postives = 110/224 (49.11%), Query Frame = -3 Query: 102 ETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTPESNKKVKLCDSNNESNQTHNNSASELSGEQSRAVIDINDEQSNSDAQVLEITNAASHVTPMRNRPPRLGMPERFPRSHSTGHSLVLAGVSVERYTLRFPDEVRKKLMTRGKLKRTASFNAALAMXXXXXXXXXXXXXXXXRNYVDRQIGRSDRWVFSMTPPFVSKM---GFVKVGGEGMGLGDGWNS 764 ETLRLLPKCDHVFHPHCI WL HVTCPVCR NL ++ + + +++ E+ Q QS V+E+ PR+ +FPRSH+TGHS+VL G S +R+TLR P+E+RKK+M KL R+ S VDR +SDRW+F TP F+ + G +++GG G G+ S Sbjct: 135 ETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNLAEQTPEPEVVVETDLEAQQ-----------------------QSAVPVPVVEL--------------PRV----KFPRSHTTGHSVVLPGESTDRFTLRVPEELRKKIMANWKLNRSNS-----------VFVLPRGGSSRSGKQVDRSRAKSDRWLFRKTPSFLWRNRDDGSIRLGGTGSVRGNSVTS 306
BLAST of CN185702 vs. ExPASy Swiss-Prot
Match: ATL3B_ARATH (RING-H2 finger protein ATL3B OS=Arabidopsis thaliana GN=ATL3B PE=1 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 2.325e-28 Identity = 80/220 (36.36%), Postives = 109/220 (49.55%), Query Frame = -3 Query: 129 ETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTPESNKKVKLCDSNNESNQTHNNSASELSGEQSRAVIDINDEQSNSDAQVLEITNAASHVTPMRNRPPRLGMP-----ERFPRSHSTGHSLVLAGVSVERYTLRFPDEVRKKLMTRGKLKRTASFNAALAMXXXXXXXXXXXXXXXXRNYVDRQIGRSDRWVFSMTPPFVSKM---GFVKVGGEG 764 ETLRLLPKCDHVFHPHCID WL +HVTCPVCRANL + ++ +E E + V++ + + L + S P G+P +F RSH+TGHS+V G ER+TLR P++VRK++M KL RT N+ L + +DR RSDRW+F TP F+ + G +++G G Sbjct: 139 ETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQV-----------AEGESVEPGGTEPDLELQQVVVNPEPVVTAPVPEQLVTSEVDSRRLP--------GVPVDLKRVKFSRSHTTGHSVVQPGECTERFTLRLPEDVRKRIMKDWKLNRT---NSLLVLPRGGSSRRGKP--------IDRSRARSDRWLFRKTPSFLWRSRDDGSIRLGATG 328
BLAST of CN185702 vs. ExPASy Swiss-Prot
Match: ATL2G_ARATH (RING-H2 finger protein ATL2G OS=Arabidopsis thaliana GN=ATL2G PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.252e-22 Identity = 66/164 (40.24%), Postives = 97/164 (59.15%), Query Frame = -3 Query: 288 ETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTPESNKKVKLCDSNNESNQTHNNSASELSGEQSRAVIDINDEQSNSDAQVLE-ITNAASHVTPMRNRPPRLGMPE----RFPRSHSTGHSLVLAGVSVERYTLRFPDEVRKKLMTRGKLKRTASFNAAL 764 ETLRL+P C HVFH C+DVWL+ H TCP+CRA+L N++ DS + T + S + + V++ +SDA +L+ +T + S++TP R++ L + FPRSHSTGHSL+ +++R+TLR PD+VR++LM K RT A L Sbjct: 146 ETLRLMPPCCHVFHADCVDVWLSEHSTCPLCRADLV--LNQQGDDDDSTESYSGTDPGTISSSTDPERGMVLE------SSDAHLLDAVTWSNSNITP-RSKSTGLSSWQITGILFPRSHSTGHSLIQPAGNLDRFTLRLPDDVRRQLM---KTSRTMGHVALL 297
BLAST of CN185702 vs. ExPASy Swiss-Prot
Match: ATL4O_ARATH (RING-H2 finger protein ATL4O OS=Arabidopsis thaliana GN=ATL4O PE=2 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 3.595e-21 Identity = 65/161 (40.37%), Postives = 89/161 (55.28%), Query Frame = -3 Query: 288 ETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTPESNKKVKLCDSNNESNQTHNNSASELSGEQSRAVIDINDEQSNSDAQVLEITNAASHVTPMRNRPPRLGMPERFPRSHSTGHSLVLAGVSVERYTLRFPDEVRKKLM-TRG-KLKRTASFNAAL 764 ET+RLLP C+H+FH CID WL SH TCPVCR+NLT +SNK + L+ + V+DI + +E+ A SH +R + +FPRS+STGHS+ ER+TLR PD+V+ +LM +G +LKRT SF+ L Sbjct: 134 ETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNLTAKSNK------------PGDEDDGVPLAAMRDHVVVDI---------ETVEV--AKSH-----HRRLSSEISGKFPRSNSTGHSMDRFSDGTERFTLRLPDDVKMRLMAVKGRRLKRTRSFDVDL 266
BLAST of CN185702 vs. ExPASy Swiss-Prot
Match: ATL1N_ARATH (RING-H2 finger protein ATL1N OS=Arabidopsis thaliana GN=ATL1N PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 8.009e-21 Identity = 82/257 (31.91%), Postives = 125/257 (48.64%), Query Frame = -3 Query: 18 ETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTPESNKKVKLCDSNNESNQTHNNSASELSGEQSRAVIDINDEQSNSDAQVLE-ITNAASHVTPMRNRPPRLGMPERFPRSHSTGHSLVLAGVSVERYTLRFPDEVRKKLMTRGKLKRTASFNAALAMXXXXXXXXXXXXXXXXRN--YVDR--QIGRSDRWVFSMTPPF-VSKMGFVKVGGEGMGLGDGWN-SNGRNLLTAVKSPLNCLNV-KIGQGGESSS 764 ETLRL+PKC HVFHP CID WL SH TCP+CRA+L P + + S ++ S+ +G++ R++ + DA+++E + + P R+ + F S TG +++R+TLR P ++ KL+ + + AL RN Y +R Q GR DR FS+TPP+ S + + GG G GD S+ ++LL A++SP + L + K GE+SS Sbjct: 155 ETLRLIPKCCHVFHPGCIDAWLRSHTTCPLCRADLIPVPGESIV---SIQIPGLVNDPPGSDPNGDRIRSL-------GSPDARLIESVALTCNQSMPRRSMSTGWNLAGMFTNSDRTGQH----SENLDRFTLRLPQDIHNKLVN----PNLSKVHVALPQVMSSTRGYRTGSLGSERNYFYYERFDQDGRLDRRPFSITPPYRTSSINHMSPGGSG---GDKVRASSPKSLLLAMRSPFDRLFLGKNNNVGENSS 390
BLAST of CN185702 vs. ExPASy Swiss-Prot
Match: ATL4D_ARATH (Putative RING-H2 finger protein ATL4D OS=Arabidopsis thaliana GN=ATL4D PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.366e-20 Identity = 62/157 (39.49%), Postives = 91/157 (57.96%), Query Frame = -3 Query: 309 ETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTPESNKKVKLCDSNNESNQTHNNSASELSGEQSRAVIDINDEQSNSDAQVLEITNAASHVTPMRNRPPRL----GMPERF-PRSHSTGHSLVLAGVSVERYTLRFPDEVRKKLMTRGKLKRT 764 E LR +P C H FH +CID WL+S TCPVCRANL+ +S + + S +G R V + DE+S + + V N A++ TP R+R L +PE F PRSHSTGHSLV +++R+TL+ P+EV+++L++ +KR+ Sbjct: 131 EPLRWMPPCSHTFHANCIDEWLSSRSTCPVCRANLSLKS------------GDSFPHPSMDVETGNAQRGVQESPDERSLTGSSV-TCNNNANYTTP-RSRSTGLLSSWHVPELFLPRSHSTGHSLVQPCQNIDRFTLQLPEEVQRQLVSLNLIKRS 273
BLAST of CN185702 vs. ExPASy Swiss-Prot
Match: ATL1H_ARATH (RING-H2 finger protein ATL1H OS=Arabidopsis thaliana GN=ATL1H PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.855e-20 Identity = 60/149 (40.27%), Postives = 82/149 (55.03%), Query Frame = -3 Query: 336 ETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTPESNKKVKLCDSNN--ESNQTHNNSASELSGEQSRAVIDINDEQSNSDAQVLEITNAASHVTPMRNRPPRLG----MPERFPRSHSTGHSLVLAGVSVERYTLRFPDEVRKKL 764 ETLRL+P C H FH CIDVWL+S TCPVCRA+L P+ D N+ + H+N +L +R + + + D L +N TP R+R L FPRSHSTGHSLV +++R+TL+ P+EVR++L Sbjct: 139 ETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRASLPPKPGS-----DQNSLYPFIRPHDNQDMDLENVTARRSVLESPDVRLLDR--LSWSNNTGANTPPRSRSTGLSNWRITELLFPRSHSTGHSLVPRVENLDRFTLQLPEEVRRQL 280
BLAST of CN185702 vs. ExPASy Swiss-Prot
Match: ATL1C_ARATH (RING-H2 finger protein ATL1C OS=Arabidopsis thaliana GN=ATL1C PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.859e-18 Identity = 72/255 (28.24%), Postives = 113/255 (44.31%), Query Frame = -3 Query: 21 ETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTPESNKKVKLCDSNNESNQTHNNSASELSGEQSRAVIDINDEQSNSDAQVLEITNAASHVTPMRNRPPRLGMPERFPRSHSTGHSLVLAGVSVERYTLRFPDEVRKKLMTRGKLKRTASFNAALAMXXXXXXXXXXXXXXXXRN--YVDR--QIGRSDRWVFSMTPPFVSKMGFVKVGGEGMGLGDGWNSNG---RNLLTAVKSPLNCLNVKIGQGGESS 764 ETLRL+P+C HVFHP CID WL S TCP+CRANL P + V + + +T NS + + V+ DE+ + + + P ++ + E + + S G +++RYTLR P E+ +L+ K+ + AL +N Y +R Q GR DR FS+TPP+ ++ ++ E + + + LL A++SP + L GE S Sbjct: 129 ETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCRANLVPVPGESVS-SEIPGLARETGQNSLRTPIDDNRKRVLTSPDER-----LIDSVAWTGNQSMPRKSMSTGWKLAELYSPASSPGQ----PEENLDRYTLRLPQEIHDQLVNSSLGKQGSKGQLALPQERSSVRGFRTGSLGTEKNYFYFERFDQDGRLDRRPFSITPPYHTRS--IQSPDEIINASGNYQDRAGAPKGLLLAIRSPFDRLFTGKKNAGERS 371
BLAST of CN185702 vs. ExPASy Swiss-Prot
Match: ATL4C_ARATH (Putative RING-H2 finger protein ATL4C OS=Arabidopsis thaliana GN=ATL4C PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.016e-17 Identity = 56/154 (36.36%), Postives = 86/154 (55.84%), Query Frame = -3 Query: 309 ETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTPESNKKVKLCDSNNESNQTHNNSASELSGEQSRAVIDINDEQSNSDAQVLEITNAASHVTPMRNRPPRLGMPERF-PRSHSTGHSLV-LAGVSVERYTLRFPDEVRKKLMTRGKLKRT 764 ETLR +P C H FH +CIDVWL+S TCPVCRANL+ + + + + N E G Q + +E+S + V + + ++ R M E F PRSHSTGHSLV G +++R+TL+ P+EV+++L++ ++R+ Sbjct: 134 ETLRWMPPCSHTFHANCIDVWLSSWSTCPVCRANLSLKPGE-----------SYPYLNMDVETGGVQK-----LPNERSLTGNSVTTRSRSTGLLSSWR-------MAEIFVPRSHSTGHSLVQQLGENLDRFTLQLPEEVQRQLVSLNLIRRS 264
BLAST of CN185702 vs. ExPASy Swiss-Prot
Match: ATL5L_ARATH (Putative RING-H2 finger protein ATL5L OS=Arabidopsis thaliana GN=ATL5L PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.939e-16 Identity = 52/153 (33.99%), Postives = 74/153 (48.37%), Query Frame = -3 Query: 303 LRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTPESNKKVKLCDSNNESNQTHNNSASELSGEQSRAVIDINDEQSNSDAQVLEITNAASHVTPMRNRPPRLGMPERFPRSHSTGHSLVLAGVSVE-RYTLRFPDEVRKKLMTRGKLKRTAS 758 LRLL C HVFH CID WL S+ TCPVCR NL P + + +K H N E + + + ++ + S ++ + +E +P++F RS +TGHS+V E RYTLR PD V+ K+ R +T S Sbjct: 128 LRLLTTCYHVFHQECIDQWLESNKTCPVCRRNLDPNAPENIKELIIEVIQENAHENRDQEQTSTSNEVM--LSRQSSGNNERKIET------------------LPDKFSRSKTTGHSIVRNKPEEEDRYTLRLPDHVKIKVTRRHNNNQTES 260 The following BLAST results are available for this feature:
BLAST of CN185702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185702 ID=CN185702; Name=CN185702; organism=Citrus sinensis; type=EST; length=766bpback to top |