CN185691

Overview
NameCN185691
Unique NameCN185691
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1508 contig Csv1_Contig1508:266..944. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CN185691 vs. ExPASy Swiss-Prot
Match: PCP_PYRFU (Pyrrolidone-carboxylate peptidase OS=Pyrococcus furiosus GN=pcp PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11
Identity = 46/148 (31.08%), Postives = 73/148 (49.32%), Query Frame = -1 
Query:  194 GVTLGSCTVLEAAGDGALPTLLKTLESSISQTNSNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQIPVVLEDGGISRSRQTSLSTEAILKFLKKKGFDVVISDDAGRFVCNYVYYHSLRFAEQKGHKSL--FVHVP 631
            G+ +G   V        LP +    +  + +T    +  I IHVG+  G S  ++ER AVN      PD  G + +  P+V    G   +  ++L  + I+K L ++G    IS+ AG ++CNYV Y SL  +  KG+  +  F+HVP
Sbjct:   28 GIKIGDAQVFGRV----LPVVFGKAKEVLEKTLEEIKPDIAIHVGLAPGRSAISIERIAVNAIDARIPDNEGKKIEDEPIV---PGAPTAYFSTLPIKKIMKKLHERGIPAYISNSAGLYLCNYVMYLSLHHSATKGYPKMSGFIHVP 168
The following BLAST results are available for this feature:
BLAST of CN185691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PCP_PYRFU3.570e-1131.08Pyrrolidone-carboxylate peptidase OS=Pyrococcus fu... [more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0001L17_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001L17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185691 ID=CN185691; Name=CN185691; organism=Citrus sinensis; type=EST; length=679bp
TTTTTTTTTTTTGGACGTAAAGCAAATTATTATTTCATAATCATATTGAT
ACAGTTGTTTCATTACACACCAACAACACAAGAGAAAACAGATGGAAATT
CAAATAATCATATATTCAACATGTTGATGCAACGGCCTCGAAGAGTGTGG
CTACGAATTGCATCTGAGTGTCTTCATCAATTGTTGAGAAGAGAGGAACA
TGGACAAACAGCGACTTGTGACCCTTCTGCTCTGCAAACCGAAGTGAGTG
GTAATAGACATAATTGCAAACGAAACGGCCTGCATCGTCAGATATAACTA
CATCAAAGCCCTTCTTCTTCAAGAACTTCAGGATTGCTTCAGTGGATAGA
GATGTCTGTCTTGATCGGGAAATTCCTCCATCCTCAAGGACTACTGGAAT
TTGCTGAGGTTGCCATCCCAGTTGGTCTGGACAAAGGAACGTGGCTTCAT
TCACTGCTCGCCGCTCTAAGGCAAACTTTGATGACCCACTATTTACCCCC
ACATGAATCCAGATGACTTGTTCATTGTTTGAATTTGTTTGAGATATGCT
CGATTCCAAGGTCTTTAAAAGTGTGGGAAGTGCACCATCTCCAGCTGCCT
CCAGAACAGTGCAACTGCCTAAAGTAACACCAGCTGGCAGTCCTCTTCTT
TCAACATAAGCCTTTAGATTGTTAACTAC
back to top