CN185681

Overview
NameCN185681
Unique NameCN185681
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length754
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12188 contig Csv1_Contig12188:1437..2190. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185681 vs. ExPASy Swiss-Prot
Match: PDC2_PEA (Pyruvate decarboxylase isozyme 2 (Fragment) OS=Pisum sativum GN=PDC2 PE=2 SV=1)

HSP 1 Score: 391.734 bits (1005), Expect = 2.223e-108
Identity = 185/192 (96.35%), Postives = 188/192 (97.92%), Query Frame = -2
Query:  178 QHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCFCFIEVIVHKDDTSKELLEWGSRVSAANSRPPNPQ 753
            QHIQKMLSSETAVIAETGDSWFNCQKLKLP+GCGYEFQMQYGSIGWSVGATLGYAQ+VPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEEL+EAI  ATGPKKD  CFIEVIVHKDDTSKELLEWGSRVSAANSRPPNPQ
Sbjct:  214 QHIQKMLSSETAVIAETGDSWFNCQKLKLPEGCGYEFQMQYGSIGWSVGATLGYAQAVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELVEAIAKATGPKKDSLCFIEVIVHKDDTSKELLEWGSRVSAANSRPPNPQ 405          
BLAST of CN185681 vs. ExPASy Swiss-Prot
Match: PDC2_ORYSI (Pyruvate decarboxylase isozyme 2 OS=Oryza sativa subsp. indica GN=PDC2 PE=2 SV=2)

HSP 1 Score: 360.147 bits (923), Expect = 7.167e-99
Identity = 168/192 (87.50%), Postives = 178/192 (92.71%), Query Frame = -2
Query:  178 QHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCFCFIEVIVHKDDTSKELLEWGSRVSAANSRPPNPQ 753
            +H+QKML+S++AVIAETGDSWFNCQKLKLP+GCGYEFQMQYGSIGWSVGA LGYAQ   +KRVIACIGDGSFQVTAQDVSTM+RC Q +IIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWT+KV CEEEL EAI  A G KKDC CFIEVI HKDDTSKELLEWGSRVSAANSRPPNPQ
Sbjct:  415 KHVQKMLNSDSAVIAETGDSWFNCQKLKLPEGCGYEFQMQYGSIGWSVGALLGYAQGAKDKRVIACIGDGSFQVTAQDVSTMIRCAQNSIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTSKVKCEEELTEAIGMALGEKKDCLCFIEVIAHKDDTSKELLEWGSRVSAANSRPPNPQ 606          
BLAST of CN185681 vs. ExPASy Swiss-Prot
Match: PDC1_ORYSJ (Pyruvate decarboxylase isozyme 1 OS=Oryza sativa subsp. japonica GN=PDC1 PE=2 SV=1)

HSP 1 Score: 357.066 bits (915), Expect = 6.067e-98
Identity = 165/192 (85.94%), Postives = 180/192 (93.75%), Query Frame = -2
Query:  178 QHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCFCFIEVIVHKDDTSKELLEWGSRVSAANSRPPNPQ 753
            +HI++MLS +TAVIAETGDSWFNCQKL+LP+GCGYEFQMQYGSIGWSVGATLGYAQ+  +KRVI+CIGDGSFQ+TAQDVSTMLRCGQK+IIFLINNGGYTIEVEIHDGPYNVIKNW+YTGL+DAIHN +G CWT KV  EEELIEAI  ATG KKDC CFIE+IVHKDDTSKELLEWGSRVSAANSRPPNPQ
Sbjct:  414 KHIKEMLSGDTAVIAETGDSWFNCQKLRLPEGCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVISCIGDGSFQMTAQDVSTMLRCGQKSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLIDAIHNSDGNCWTKKVRTEEELIEAIATATGAKKDCLCFIEIIVHKDDTSKELLEWGSRVSAANSRPPNPQ 605          
BLAST of CN185681 vs. ExPASy Swiss-Prot
Match: PDC1_ORYSI (Pyruvate decarboxylase isozyme 1 OS=Oryza sativa subsp. indica GN=PDC1 PE=2 SV=1)

HSP 1 Score: 357.066 bits (915), Expect = 6.067e-98
Identity = 165/192 (85.94%), Postives = 180/192 (93.75%), Query Frame = -2
Query:  178 QHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCFCFIEVIVHKDDTSKELLEWGSRVSAANSRPPNPQ 753
            +HI++MLS +TAVIAETGDSWFNCQKL+LP+GCGYEFQMQYGSIGWSVGATLGYAQ+  +KRVI+CIGDGSFQ+TAQDVSTMLRCGQK+IIFLINNGGYTIEVEIHDGPYNVIKNW+YTGL+DAIHN +G CWT KV  EEELIEAI  ATG KKDC CFIE+IVHKDDTSKELLEWGSRVSAANSRPPNPQ
Sbjct:  414 KHIKEMLSGDTAVIAETGDSWFNCQKLRLPEGCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVISCIGDGSFQMTAQDVSTMLRCGQKSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLIDAIHNSDGNCWTKKVRTEEELIEAIATATGAKKDCLCFIEIIVHKDDTSKELLEWGSRVSAANSRPPNPQ 605          
BLAST of CN185681 vs. ExPASy Swiss-Prot
Match: PDC2_ORYSJ (Pyruvate decarboxylase isozyme 2 OS=Oryza sativa subsp. japonica GN=PDC2 PE=2 SV=1)

HSP 1 Score: 354.369 bits (908), Expect = 3.933e-97
Identity = 167/192 (86.98%), Postives = 178/192 (92.71%), Query Frame = -2
Query:  178 QHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCFCFIEVIVHKDDTSKELLEWGSRVSAANSRPPNPQ 753
            +H+QKML+S++AVIAETGDSWFNCQKLKLP+GCGYEFQMQYGSIGWSVGA LGYAQ   +KRVIACIGDGSFQVTAQDVSTM+RC Q +IIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWT+KV CEEEL EAI  A G +KDC CFIEVI HKDDTSKELLEWGSRVSAANSRPPNPQ
Sbjct:  415 KHVQKMLNSDSAVIAETGDSWFNCQKLKLPEGCGYEFQMQYGSIGWSVGALLGYAQGAKDKRVIACIGDGSFQVTAQDVSTMIRCAQNSIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTSKVKCEEELTEAIGMALG-EKDCLCFIEVIAHKDDTSKELLEWGSRVSAANSRPPNPQ 605          
BLAST of CN185681 vs. ExPASy Swiss-Prot
Match: PDC2_TOBAC (Pyruvate decarboxylase isozyme 2 OS=Nicotiana tabacum GN=PDC2 PE=2 SV=1)

HSP 1 Score: 351.673 bits (901), Expect = 2.549e-96
Identity = 173/218 (79.36%), Postives = 178/218 (81.65%), Query Frame = -2
Query:  178 QHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGY--------------------------EFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCFCFIEVIVHKDDTSKELLEWGSRVSAANSRPPNPQ 753
            QHIQKMLS ETAVIAETGDSWFNCQKLKLP+GCGY                          EFQMQYGSIGWSVGATLGYAQSVP+KRVI+CIGDGSFQVTAQDVSTM+RC QK IIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEG CWT KV  EEEL EAI  ATG KKDC CFIEVIVHKDDTSKELLEWGSRV +AN RPPNPQ
Sbjct:  397 QHIQKMLSDETAVIAETGDSWFNCQKLKLPEGCGYVTNNSLSAWYPFYLQTLEEKSSCCRYEFQMQYGSIGWSVGATLGYAQSVPKKRVISCIGDGSFQVTAQDVSTMIRCEQKNIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGNCWTMKVRTEEELTEAIATATGEKKDCLCFIEVIVHKDDTSKELLEWGSRVCSANGRPPNPQ 614          
BLAST of CN185681 vs. ExPASy Swiss-Prot
Match: PDC1_MAIZE (Pyruvate decarboxylase isozyme 1 OS=Zea mays GN=PDC1 PE=2 SV=1)

HSP 1 Score: 350.903 bits (899), Expect = 4.348e-96
Identity = 164/192 (85.42%), Postives = 177/192 (92.19%), Query Frame = -2
Query:  178 QHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCFCFIEVIVHKDDTSKELLEWGSRVSAANSRPPNPQ 753
            +HI+ MLS ++AV+AETGDSWFNCQKL+LP+GCGYEFQMQYGSIGWSVGATLGYAQ+  +KRVIACIGDGSFQVTAQDVSTMLRCGQK+IIFLINNGGYTIEVEIHDGPYNVIKNW+YTGLV+AIHN EG CWT KV  EE+L EAI   TG KKDC CFIEVIVHKDDTSKELLEWGSRVSAANSRPPNPQ
Sbjct:  419 KHIKGMLSGDSAVVAETGDSWFNCQKLRLPEGCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQDVSTMLRCGQKSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVNAIHNSEGNCWTMKVRTEEQLKEAIATVTGAKKDCLCFIEVIVHKDDTSKELLEWGSRVSAANSRPPNPQ 610          
BLAST of CN185681 vs. ExPASy Swiss-Prot
Match: PDC1_PEA (Pyruvate decarboxylase isozyme 1 OS=Pisum sativum GN=PDC1 PE=2 SV=1)

HSP 1 Score: 342.428 bits (877), Expect = 1.547e-93
Identity = 157/192 (81.77%), Postives = 174/192 (90.62%), Query Frame = -2
Query:  178 QHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCFCFIEVIVHKDDTSKELLEWGSRVSAANSRPPNPQ 753
            +HIQ ++S +TAVIAETGDSWFNCQKL+LP+ CGYEFQMQYGSIGWSVGATLGYAQ+  +KRVIACIGDGSFQVTAQD+STM+RCGQ++IIFLINNGGYTIEVEIHDGPYNVIKNW+YTG V AIHNG+GKCWT KV  EE+L EAI  ATG +KD  CFIEV  HKDDTSKELLEWGSRV+AANSRPPNPQ
Sbjct:  402 KHIQALISGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAATDKRVIACIGDGSFQVTAQDISTMIRCGQRSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGFVSAIHNGQGKCWTAKVRTEEDLTEAIATATGAEKDSLCFIEVFAHKDDTSKELLEWGSRVAAANSRPPNPQ 593          
BLAST of CN185681 vs. ExPASy Swiss-Prot
Match: PDC3_MAIZE (Pyruvate decarboxylase isozyme 3 (Fragment) OS=Zea mays GN=PDC3 PE=2 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 1.890e-91
Identity = 160/192 (83.33%), Postives = 171/192 (89.06%), Query Frame = -2
Query:  178 QHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCFCFIEVIVHKDDTSKELLEWGSRVSAANSRPPNPQ 753
            +H+QKML+ ++AVIAETGDSWFNCQKLKLP+GCGYEFQMQYGSIGWSVGA LGY Q    KRVIA IGDGSFQVTAQDVST+LRC Q +IIFLINNGGYTIEVEIHDGPYNVIKNWNYTG VDAIHNG GKCWT+KV  EE+L  AIE A G +KDC CFIEVI HKDDTSKELLEWGSRVSAANSRPPNPQ
Sbjct:   12 KHVQKMLTGDSAVIAETGDSWFNCQKLKLPEGCGYEFQMQYGSIGWSVGALLGYPQGANHKRVIAFIGDGSFQVTAQDVSTILRCEQNSIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGFVDAIHNGLGKCWTSKVKSEEDLTAAIETALG-EKDCLCFIEVIAHKDDTSKELLEWGSRVSAANSRPPNPQ 202          
BLAST of CN185681 vs. ExPASy Swiss-Prot
Match: PDC3_ORYSJ (Pyruvate decarboxylase isozyme 3 OS=Oryza sativa subsp. japonica GN=PDC3 PE=2 SV=1)

HSP 1 Score: 333.954 bits (855), Expect = 5.501e-91
Identity = 158/194 (81.44%), Postives = 174/194 (89.69%), Query Frame = -2
Query:  178 QHIQKMLSSET--AVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCFCFIEVIVHKDDTSKELLEWGSRVSAANSRPPNPQ 753
            +HIQ+M+      AV+AETGDSWFNCQKL+LP+GCGYEFQMQYGSIGWSVGA LGYAQ+V +KRV+ACIGDGSFQVTAQDVSTMLRCGQ++IIFLINNGGYTIEVEIHDGPYNVIKNW+Y GLV+AIHNGEG+CW T+V CEEEL  AI  ATG K D  CFIEV+ HKDDTSKELLEWGSRVSAANSRPPNPQ
Sbjct:  395 KHIQRMIGGTEIGAVMAETGDSWFNCQKLRLPEGCGYEFQMQYGSIGWSVGALLGYAQAV-QKRVVACIGDGSFQVTAQDVSTMLRCGQRSIIFLINNGGYTIEVEIHDGPYNVIKNWDYVGLVNAIHNGEGRCWATRVRCEEELEAAIATATGDKADSLCFIEVVAHKDDTSKELLEWGSRVSAANSRPPNPQ 587          
The following BLAST results are available for this feature:
BLAST of CN185681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
PDC2_PEA2.223e-10896.35Pyruvate decarboxylase isozyme 2 (Fragment) OS=Pis... [more]
PDC2_ORYSI7.167e-9987.50Pyruvate decarboxylase isozyme 2 OS=Oryza sativa s... [more]
PDC1_ORYSJ6.067e-9885.94Pyruvate decarboxylase isozyme 1 OS=Oryza sativa s... [more]
PDC1_ORYSI6.067e-9885.94Pyruvate decarboxylase isozyme 1 OS=Oryza sativa s... [more]
PDC2_ORYSJ3.933e-9786.98Pyruvate decarboxylase isozyme 2 OS=Oryza sativa s... [more]
PDC2_TOBAC2.549e-9679.36Pyruvate decarboxylase isozyme 2 OS=Nicotiana taba... [more]
PDC1_MAIZE4.348e-9685.42Pyruvate decarboxylase isozyme 1 OS=Zea mays GN=PD... [more]
PDC1_PEA1.547e-9381.77Pyruvate decarboxylase isozyme 1 OS=Pisum sativum ... [more]
PDC3_MAIZE1.890e-9183.33Pyruvate decarboxylase isozyme 3 (Fragment) OS=Zea... [more]
PDC3_ORYSJ5.501e-9181.44Pyruvate decarboxylase isozyme 3 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001L12_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001L12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185681 ID=CN185681; Name=CN185681; organism=Citrus sinensis; type=EST; length=754bp
GAGGAGCAAGAGGATTTAGTAGATATTAAATTTTAAAATGAATTTACATT
AGAAACCAGCAAATAGTTCAAAATACCCAAAACTTAGTAAAGTAACCACA
GAAAAGACATGCGCTCATTTAATTTGGCTATAAATGGTAGTAGAGTGCAA
TTTGCAGTATGAGCCGCCTCATATCTACTGAGGATTTGGTGGGCGGCTAT
TCGCAGCGGAGACCCTGGAGCCCCATTCCAAAAGCTCTTTGCTTGTATCA
TCCTTGTGAACAATTACTTCAATGAAGCAAAAGCAATCCTTCTTGGGTCC
AGTAGCGTTCTCAATGGCTTCGATGAGCTCCTCCTCGCAGAAGACCTTGG
TTGTCCAGCACTTGCCTTCGCCATTGTGGATTGCATCAACCAACCCGGTG
TAGTTCCAGTTCTTGATCACATTGTAAGGTCCATCATGGATCTCAACTTC
AATGGTGTAACCACCATTGTTAATTAGGAAGATTATAGTCTTCTGCCCAC
ATCGCAGCATTGTTGACACATCTTGTGCAGTTACCTGGAAGCTACCATCA
CCGATGCAAGCAATTACACGCTTCTCTGGCACAGACTGTGCATATCCAAG
AGTAGCACCAACAGACCAACCAATTGATCCATATTGCATTTGGAACTCAT
ACCCGCATCCCTTAGGCAATTTCAGTTTCTGGCAGTTAAACCAAGAGTCC
CCTGTCTCAGCAATCACAGCAGTTTCACTAGACAGCATCTTCTGTATATG
TTGG
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