CN185677
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185677 vs. ExPASy Swiss-Prot
Match: SPDE_COFAR (Spermidine synthase OS=Coffea arabica PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 1.756e-53 Identity = 93/137 (67.88%), Postives = 117/137 (85.40%), Query Frame = -1 Query: 189 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMGLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREV 599 YDAIIVDSSDP+GPAQEL EKPFF+++AKALRPGGV+C AES+ LH H+IED+++ CR+ FKGSV+YAW +VPTYPSG+IGF++CSTEGP VDF +PINPI+ +G K + L+FYNSEIHSAAF LP+F K+ + Sbjct: 175 YDAIIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVCTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPSGVIGFMLCSTEGPPVDFKHPINPIDANDGRSKTMKPLKFYNSEIHSAAFCLPSFAKKVI 311
BLAST of CN185677 vs. ExPASy Swiss-Prot
Match: SPD1_DATST (Spermidine synthase 1 OS=Datura stramonium PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.486e-52 Identity = 91/141 (64.54%), Postives = 117/141 (82.98%), Query Frame = -1 Query: 177 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMGLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSVLG 599 YDA+IVDSSDP+GPAQEL EKPFF+++A+ALRPGGV+C AES+ LH H+IED+++ CR+ FKGSV+YAW +VPTYPSG+IGF++CSTEGP VDF NPINP++ + K + L+FYNSEIHSA+F LP+F KR + G Sbjct: 167 YDAVIVDSSDPIGPAQELFEKPFFESVARALRPGGVVCTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPSGVIGFMLCSTEGPAVDFKNPINPVDADDSHTKTRGPLKFYNSEIHSASFCLPSFAKRVIESKG 307
BLAST of CN185677 vs. ExPASy Swiss-Prot
Match: SPD2_HYONI (Spermidine synthase 2 OS=Hyoscyamus niger PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 7.376e-52 Identity = 91/137 (66.42%), Postives = 115/137 (83.94%), Query Frame = -1 Query: 189 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMGLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREV 599 YDA+IVDSSDP+GPAQEL EKPFF+++A+AL PGGV+C AES+ LH H+IED++S CR+ FKGSV+YAW +VPTYPSG+IGF++CSTEGP VDF NPINPI+ + K + L+FYNSEIHSA+F LP+F KR + Sbjct: 167 YDAVIVDSSDPIGPAQELFEKPFFESVARALCPGGVVCTQAESIWLHMHIIEDIVSNCRQIFKGSVNYAWTTVPTYPSGVIGFMLCSTEGPAVDFKNPINPIDADDSHTKTRGPLKFYNSEIHSASFCLPSFAKRVI 303
BLAST of CN185677 vs. ExPASy Swiss-Prot
Match: SPD1_ORYSJ (Spermidine synthase 1 OS=Oryza sativa subsp. japonica GN=SPDSYN1 PE=2 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 6.244e-51 Identity = 91/137 (66.42%), Postives = 114/137 (83.21%), Query Frame = -1 Query: 189 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMGLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREV 599 YDA+IVDSSDP+GPAQEL EKPFF ++A+ALRPGGV+C AES+ LH H+IED+++ CR+ FKGSV+YAW +VPTYPSG+IGF++CSTEGP VDF +PI IE E + K K L+FYNSEIHSA+F LP+F KR + Sbjct: 182 YDAVIVDSSDPIGPAQELFEKPFFQSVARALRPGGVVCTQAESIWLHMHIIEDIVANCRQVFKGSVNYAWTTVPTYPSGVIGFMLCSTEGPTVDFQHPIFNIEDNEFSTKSKGPLKFYNSEIHSASFCLPSFAKRVI 318
BLAST of CN185677 vs. ExPASy Swiss-Prot
Match: SPD1_PEA (Spermidine synthase 1 OS=Pisum sativum GN=SPDSYN1 PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 8.155e-51 Identity = 89/138 (64.49%), Postives = 116/138 (84.06%), Query Frame = -1 Query: 186 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMGLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVS 599 YDA+IVDSSDP+GPAQEL EKPFF+++A+ALRPGGV+C AES+ LH H+IED++ CR+ FKGSV+YAW +VPTYPSG+IGF++CSTEGP VDF +P+NPI++ + + R L+FYN EIHSAAF LP+F KR ++ Sbjct: 194 YDAVIVDSSDPIGPAQELFEKPFFESVARALRPGGVVCTQAESIWLHMHIIEDIVVNCRQVFKGSVNYAWTTVPTYPSGMIGFMLCSTEGPSVDFKHPVNPIDE-NDSQQAARPLKFYNREIHSAAFCLPSFAKRAIA 330
BLAST of CN185677 vs. ExPASy Swiss-Prot
Match: SPD2_PEA (Spermidine synthase 2 OS=Pisum sativum GN=SPDSYN2 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.391e-50 Identity = 90/137 (65.69%), Postives = 115/137 (83.94%), Query Frame = -1 Query: 189 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMGLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREV 599 YDA+IVDSSDP+GPAQEL EKPFF ++A+ALRPGGV+C AES+ LH +IED++S CR FKGSV+YAW +VPTYPSG+IGF++CSTEGP VDF +P+NPI++ + K R L+FYNSEIH+AAF LP+F KR++ Sbjct: 202 YDAVIVDSSDPIGPAQELFEKPFFQSVARALRPGGVMCTQAESIWLHMDIIEDIVSNCRHIFKGSVNYAWTTVPTYPSGMIGFMLCSTEGPLVDFKHPVNPIDQ-KDCQKSVRPLKFYNSEIHTAAFCLPSFAKRKI 337
BLAST of CN185677 vs. ExPASy Swiss-Prot
Match: SPD1_ARATH (Spermidine synthase 1 OS=Arabidopsis thaliana GN=SPDSYN1 PE=1 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.391e-50 Identity = 90/137 (65.69%), Postives = 114/137 (83.21%), Query Frame = -1 Query: 189 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMGLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREV 599 YDA+IVDSSDP+GPA+EL EKPFF ++A+ALRPGGV+C AES+ LH +IED++S CRE FKGSV+YAW SVPTYPSG+IGF++CSTEGP VDF +P+NPI+ E + K L+FYN+EIHSAAF LP+F K+ + Sbjct: 195 YDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNCREIFKGSVNYAWTSVPTYPSGVIGFMLCSTEGPDVDFKHPLNPID--ESSSKSNGPLKFYNAEIHSAAFCLPSFAKKVI 329
BLAST of CN185677 vs. ExPASy Swiss-Prot
Match: SPDE_SOLLC (Spermidine synthase OS=Solanum lycopersicum GN=SPDSYN PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.099e-50 Identity = 92/141 (65.25%), Postives = 114/141 (80.85%), Query Frame = -1 Query: 177 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMGLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSVLG 599 YDA+IVDSSDP+GPAQEL EKPFF++IAKALRPGGV+ AES+ LH H+IE++++ CR+ FKGSV+YAW +VPTYPSG+IGF++CSTEGP VDF NPINPI+ E K L+FYNSEIH A+F LP+F KR + G Sbjct: 202 YDAVIVDSSDPIGPAQELFEKPFFESIAKALRPGGVVSTQAESIWLHMHIIEEIVANCRQIFKGSVNYAWTTVPTYPSGMIGFMLCSTEGPAVDFKNPINPIDD-ESPAKSIEPLKFYNSEIHQASFCLPSFAKRVIETKG 341
BLAST of CN185677 vs. ExPASy Swiss-Prot
Match: SPD2_DATST (Spermidine synthase 2 OS=Datura stramonium PE=2 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 6.904e-50 Identity = 92/141 (65.25%), Postives = 114/141 (80.85%), Query Frame = -1 Query: 177 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMGLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSVLG 599 YDA+IVDSSDP+GPAQEL EKPFF+TIA+ALRPGGV+ AES+ LH H+IE++++ CRE FKGSV+YAW +VPTYPSG+IGF++CSTEGP VDF NPINPI+ E + L+FYNSEIH A+F LP+F KR + G Sbjct: 177 YDAVIVDSSDPIGPAQELFEKPFFETIARALRPGGVVSTQAESIWLHMHIIEEIVANCREIFKGSVNYAWTTVPTYPSGMIGFMLCSTEGPAVDFKNPINPIDD-ESHGQTIGPLKFYNSEIHQASFCLPSFAKRVIETKG 316
BLAST of CN185677 vs. ExPASy Swiss-Prot
Match: SPD1_HYONI (Spermidine synthase 1 OS=Hyoscyamus niger PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.178e-49 Identity = 91/141 (64.54%), Postives = 114/141 (80.85%), Query Frame = -1 Query: 177 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMGLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSVLG 599 YDA+IVDSSDP+GPAQEL EKPFF++IA+ALRPGGV+ AES+ LH H+IE++++ CR+ FKGSV+YAW +VPTYPSG+IGF++CSTEGP VDF NPINPI+ E K L+FYNSEIH A+F LP+F KR + G Sbjct: 175 YDAVIVDSSDPIGPAQELFEKPFFESIARALRPGGVVSTQAESIWLHMHIIEEIVANCRQIFKGSVNYAWTTVPTYPSGMIGFMLCSTEGPAVDFKNPINPIDD-ESGPKTIAPLKFYNSEIHQASFCLPSFAKRVIESKG 314 The following BLAST results are available for this feature:
BLAST of CN185677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185677 ID=CN185677; Name=CN185677; organism=Citrus sinensis; type=EST; length=602bpback to top |