CN185643
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185643 vs. ExPASy Swiss-Prot
Match: SNAK2_SOLTU (Snakin-2 OS=Solanum tuberosum GN=SN2 PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 4.337e-30 Identity = 54/75 (72.00%), Postives = 60/75 (80.00%), Query Frame = 3 Query: 105 TINSSKGTGYPKPSIDCGGACHARCRLSSRPNLCHRACGTCCARCNCVPPGTAGNTEVCPCYANMTTHHGRRKCP 329 T N+ Y IDCGGAC ARCRLSSRP LC+RACGTCCARCNCVPPGT+GNTE CPCYA++TTH +RKCP Sbjct: 30 TSNAISEAAYSYKKIDCGGACAARCRLSSRPRLCNRACGTCCARCNCVPPGTSGNTETCPCYASLTTHGNKRKCP 104
BLAST of CN185643 vs. ExPASy Swiss-Prot
Match: GASA1_ARATH (Gibberellin-regulated protein 1 OS=Arabidopsis thaliana GN=GASA1 PE=1 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 3.108e-28 Identity = 54/73 (73.97%), Postives = 57/73 (78.08%), Query Frame = 3 Query: 111 NSSKGTGYPKPSIDCGGACHARCRLSSRPNLCHRACGTCCARCNCVPPGTAGNTEVCPCYANMTTHHGRRKCP 329 NS K GY K IDCG AC ARCRLS RP LCHRACGTCC RCNCVPPGT GN + C CYA++TTH GRRKCP Sbjct: 27 NSQKKNGYAK-KIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 98
BLAST of CN185643 vs. ExPASy Swiss-Prot
Match: GASA3_ARATH (Gibberellin-regulated protein 3 OS=Arabidopsis thaliana GN=GASA3 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.035e-23 Identity = 48/73 (65.75%), Postives = 53/73 (72.60%), Query Frame = 3 Query: 111 NSSKGTGYPKPSIDCGGACHARCRLSSRPNLCHRACGTCCARCNCVPPGTAGNTEVCPCYANMTTHHGRRKCP 329 +S G G K IDCGG C RC SSRPNLC RAC +CC RCNCVPPGTAGN +CPCYA++TT GR KCP Sbjct: 29 DSQVGEGVVK--IDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKCP 99
BLAST of CN185643 vs. ExPASy Swiss-Prot
Match: GASA2_ARATH (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana GN=GASA2 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.765e-23 Identity = 48/77 (62.34%), Postives = 56/77 (72.73%), Query Frame = 3 Query: 102 HTINSSK-GTGYPKPSIDCGGACHARCRLSSRPNLCHRACGTCCARCNCVPPGTAGNTEVCPCYANMTTHHGRRKCP 329 H + +K G G K IDCGG C RC SSR LC RAC +CC+RCNCVPPGT+GNT +CPCYA++TTH GR KCP Sbjct: 25 HAADGAKVGEGVVK--IDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKCP 99
BLAST of CN185643 vs. ExPASy Swiss-Prot
Match: GAST1_SOLLC (Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.643e-11 Identity = 32/71 (45.07%), Postives = 38/71 (53.52%), Query Frame = 3 Query: 117 SKGTGYPKPSIDCGGACHARCRLSSRPNLCHRACGTCCARCNCVPPGTAGNTEVCPCYANMTTHHGRRKCP 329 S+G +P+ DC C RC +S C C CCA+C CVP GT GN + CPCY N T G KCP Sbjct: 45 SEGRLHPQ---DCQPKCTYRCSKTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSCPCYNNWKTKRGGPKCP 112
BLAST of CN185643 vs. ExPASy Swiss-Prot
Match: RSI1_SOLLC (Protein RSI-1 OS=Solanum lycopersicum GN=RSI-1 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.509e-11 Identity = 28/60 (46.67%), Postives = 31/60 (51.67%), Query Frame = 3 Query: 150 DCGGACHARCRLSSRPNLCHRACGTCCARCNCVPPGTAGNTEVCPCYANMTTHHGRRKCP 329 DC C RC +S C C CCA C CVP G GN + CPCY N T G+ KCP Sbjct: 37 DCKPRCTYRCSATSHKKPCMFFCQKCCATCLCVPKGVYGNKQSCPCYNNWKTQEGKPKCP 96
BLAST of CN185643 vs. ExPASy Swiss-Prot
Match: SNAK1_SOLTU (Snakin-1 OS=Solanum tuberosum GN=SN1 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.691e-11 Identity = 25/59 (42.37%), Postives = 30/59 (50.85%), Query Frame = 3 Query: 153 CGGACHARCRLSSRPNLCHRACGTCCARCNCVPPGTAGNTEVCPCYANMTTHHGRRKCP 329 C C RC + + C + CG CC C CVP GT GN CPCY + G+ KCP Sbjct: 30 CDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGNKHECPCYRDKKNSKGKSKCP 88 The following BLAST results are available for this feature:
BLAST of CN185643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185643 ID=CN185643; Name=CN185643; organism=Citrus sinensis; type=EST; length=519bpback to top |