CN185641
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185641 vs. ExPASy Swiss-Prot
Match: RN181_XENTR (E3 ubiquitin-protein ligase rnf181 OS=Xenopus tropicalis GN=rnf181 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.237e-16 Identity = 38/89 (42.70%), Postives = 59/89 (66.29%), Query Frame = 2 Query: 410 PPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCRYKMPVEEEESGYKRYERRIE 676 PPA+K VE++P + V + +A +C VCL E+E GE R++PC+H FH++CI WLG SCP+CR+++P + E Y+ Y++ E Sbjct: 53 PPAAKKVVESLPKVTVTPEQADA-ALKCPVCLLEFEEGETVRQLPCEHLFHSSCILPWLGKTNSCPLCRHELPTDSPE--YEEYKQEKE 138
BLAST of CN185641 vs. ExPASy Swiss-Prot
Match: CIP8_ARATH (E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.985e-16 Identity = 40/114 (35.09%), Postives = 67/114 (58.77%), Query Frame = 2 Query: 350 IEGTSSLETLLRNFV--------GKDGQPPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCRYKMPVEEEESGYKRYER 667 I+ + E LL+N G+ G PPA+K+++EA+ + +V SE E + C VC + +GE +++PC H +H +CI WLG + SCPVCR+++ ++ E +R +R Sbjct: 203 IDDAAGYEALLQNLAEGDGGGGGGRRGAPPAAKSAIEALETFEVSSSEGEMVM-VCAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRNSCPVCRFQLETDDAEYEEERKKR 315
BLAST of CN185641 vs. ExPASy Swiss-Prot
Match: RN181_XENLA (E3 ubiquitin-protein ligase rnf181 OS=Xenopus laevis GN=rnf181 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.450e-15 Identity = 39/97 (40.21%), Postives = 61/97 (62.89%), Query Frame = 2 Query: 410 PPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCRYKMPVE--------EEESGYKRYERRIE 676 PPASK VE++P + V + +A +C VCL E+E GE R++PC+H FH+ CI WLG SCP+CR+++P + +E++ ++ E R+E Sbjct: 53 PPASKKVVESLPKVTVTPEQADA-ALKCPVCLLEFEEGETVRQLPCEHLFHSACILPWLGKTNSCPLCRHELPTDSPDYEEFKQEKARRQQKEHRLE 148
BLAST of CN185641 vs. ExPASy Swiss-Prot
Match: RN126_MOUSE (RING finger protein 126 OS=Mus musculus GN=Rnf126 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.474e-15 Identity = 39/87 (44.83%), Postives = 51/87 (58.62%), Query Frame = 2 Query: 356 GTSSLETLLRNFVGKDGQPPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCR 616 G ++ T L N G PPA K ++A+P++ V E E G EC VC E+Y +GE R++PC H FH +CI WL SCPVCR Sbjct: 187 GLDTIITQLLNQFENTGPPPADKEKIQALPTVPVTE-EHVGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCR 272
BLAST of CN185641 vs. ExPASy Swiss-Prot
Match: R126A_XENLA (RING finger protein 126-A OS=Xenopus laevis GN=rnf126-A PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.511e-15 Identity = 38/87 (43.68%), Postives = 51/87 (58.62%), Query Frame = 2 Query: 356 GTSSLETLLRNFVGKDGQPPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCR 616 G ++ T L N G PPA ++A+P+I++ E E G EC VC E+Y VGE R++PC H FH +CI WL +CPVCR Sbjct: 184 GLDTIITQLLNQFENTGPPPADNEKIQALPTIQITE-EHVGSGLECPVCKEDYTVGECVRQLPCNHLFHNDCIIPWLEQHDTCPVCR 269
BLAST of CN185641 vs. ExPASy Swiss-Prot
Match: R126B_XENLA (RING finger protein 126-B OS=Xenopus laevis GN=rnf126-B PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.198e-15 Identity = 38/87 (43.68%), Postives = 51/87 (58.62%), Query Frame = 2 Query: 356 GTSSLETLLRNFVGKDGQPPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCR 616 G ++ T L N G PPA ++A+P+I++ E E G EC VC E+Y VGE R++PC H FH +CI WL +CPVCR Sbjct: 184 GLDTIITQLLNQFENTGPPPADTDKIQALPTIQITE-EHVGFGLECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCR 269
BLAST of CN185641 vs. ExPASy Swiss-Prot
Match: RN126_XENTR (RING finger protein 126 OS=Xenopus tropicalis GN=rnf126 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.400e-15 Identity = 38/87 (43.68%), Postives = 51/87 (58.62%), Query Frame = 2 Query: 356 GTSSLETLLRNFVGKDGQPPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCR 616 G ++ T L N G PPA ++A+P+I++ E E G EC VC E+Y VGE R++PC H FH +CI WL +CPVCR Sbjct: 183 GLDTIITQLLNQFENTGPPPADTEKIQALPTIQITE-EHVGSGLECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCR 268
BLAST of CN185641 vs. ExPASy Swiss-Prot
Match: RN126_HUMAN (RING finger protein 126 OS=Homo sapiens GN=RNF126 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.400e-15 Identity = 38/87 (43.68%), Postives = 50/87 (57.47%), Query Frame = 2 Query: 356 GTSSLETLLRNFVGKDGQPPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCR 616 G ++ T L N G PPA K ++A+P++ V E E G EC VC ++Y +GE R++PC H FH CI WL SCPVCR Sbjct: 185 GLDAIITQLLNQFENTGPPPADKEKIQALPTVPVTE-EHVGSGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCR 270
BLAST of CN185641 vs. ExPASy Swiss-Prot
Match: RN126_BOVIN (RING finger protein 126 OS=Bos taurus GN=RNF126 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.228e-14 Identity = 38/87 (43.68%), Postives = 50/87 (57.47%), Query Frame = 2 Query: 356 GTSSLETLLRNFVGKDGQPPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCR 616 G ++ T L N G PPA K ++A+P++ V E E G EC VC ++Y +GE R++PC H FH CI WL SCPVCR Sbjct: 188 GLDAIITQLLNQFENTGPPPADKEKIQALPTVPVTE-EHVGSGLECPVCKDDYGLGEHVRQLPCNHLFHDGCIVPWLEQHDSCPVCR 273
BLAST of CN185641 vs. ExPASy Swiss-Prot
Match: RN115_HUMAN (RING finger protein 115 OS=Homo sapiens GN=RNF115 PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.228e-14 Identity = 36/97 (37.11%), Postives = 59/97 (60.82%), Query Frame = 2 Query: 356 GTSSLETLLRNFVGK---DGQPPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCRYKMPVEE 637 G + L+ ++ +G+ G PPA K + ++P++ V + E+ +G EC VC E+Y V E R++PC H FH++CI WL + +CPVCR + E+ Sbjct: 181 GQTGLDAIVTQLLGQLENTGPPPADKEKITSLPTVTVTQ-EQVDMGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGED 276 The following BLAST results are available for this feature:
BLAST of CN185641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185641 ID=CN185641; Name=CN185641; organism=Citrus sinensis; type=EST; length=692bpback to top |