CN185640

Overview
NameCN185640
Unique NameCN185640
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length568
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN185640 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.482e-13
Identity = 35/64 (54.69%), Postives = 42/64 (65.62%), Query Frame = -3 
Query:  258 DTFGKCD*SDRSQIVTKGSS*DADFVETALSFVNTVVVRDVQADEIEGNCKCGPTCPCVNCTCG 449
            DT G CD +D++Q V KGSS  AD +ET  S +   VV D  A E +G CKCGP+C C NCTCG
Sbjct:    3 DTCGNCDCADKTQCVKKGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64
The following BLAST results are available for this feature:
BLAST of CN185640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MT3_CARPA3.482e-1354.69Metallothionein-like protein type 3 OS=Carica papa... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0001K11_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001K11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185640 ID=CN185640; Name=CN185640; organism=Citrus sinensis; type=EST; length=568bp
ATTACCCCTTTTAAGGCCACAGTCATGGCCATGGCCATATATTACACCTT
TATGAAGAAGGAAACACAAAACATTACCAGTGATGGGTGACACAACTCGC
ACATCACTCCACACACTAATTCTATACCATCATAAAAACGAATTAAAGAA
TTTTTCTTTTTTTTTTGATCACCCTTACATTATTCTTAACCCCCCCAATA
TTTAGGCACACTTGCAGCTTCTTATTTTTTGCTGCATGTGTTTGCTTATT
AATGACTACCACAAGTGCAGTTCACACAAGGGCAAGTGGGGCCGCACTTG
CAATTACCTTCAATCTCATCAGCCTGAACGTCCCTGACAACCACGGTGTT
GACAAAACTCAAGGCAGTCTCTACGAAGTCAGCATCCTAACTGCTTCCCT
TCGTCACAATCTGGCTCCTGTCACTTCAGTCGCATTTGCCGAAGGTGTCC
CAAATGTTAATTGAGCTTAGAACTTGGAATTTAAAACTGGAAATAAAGGG
GTCTTTATTGTTTATTTTTTTTTTTACCCGAAATGTAACAAAATATTAAT
AACGCATTTTCACTGTTC
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