CN185628

Overview
NameCN185628
Unique NameCN185628
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10427 contig Csv1_Contig10427:1183..1880. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185628 vs. ExPASy Swiss-Prot
Match: ASPR_CUCPE (Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.355e-77
Identity = 132/178 (74.16%), Postives = 156/178 (87.64%), Query Frame = -3
Query:  163 INMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 696
            +++LL++ +P+KICSQI LCTFDG+RGVSMGIESVV EN  ++S   HD MCS CEM VVWMQNQL+QNQT+ERI+NY+NELCDR+PSPMG+SAVDC +LSS+P VSFTIGGKIFDL P++YILKVGEG  AQCISGF+A D+ PPRGPLWILGDVFMG YHTVFD+  +RVG AEAA
Sbjct:  336 MDLLLSEADPKKICSQINLCTFDGTRGVSMGIESVVDENAGKSSDSLHDGMCSVCEMTVVWMQNQLRQNQTKERIINYINELCDRMPSPMGQSAVDCGQLSSMPTVSFTIGGKIFDLAPEEYILKVGEGPVAQCISGFTAFDIPPPRGPLWILGDVFMGRYHTVFDFGKLRVGSAEAA 513          
BLAST of CN185628 vs. ExPASy Swiss-Prot
Match: ASPR_HORVU (Phytepsin OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 3.819e-72
Identity = 125/178 (70.22%), Postives = 152/178 (85.39%), Query Frame = -3
Query:  163 INMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 696
            +++LLA+ +P+KICSQ+GLCTFDG+RGVS GI SVV +   +++G   D MCS CEMAVVWMQNQL QN+TQ+ IL+YVN+LC+RLPSPMGESAVDC  L S+P + FTIGGK F L P++YILKVGEG AAQCISGF+A+D+ PPRGPLWILGDVFMGPYHTVFDY  +R+GFA+AA
Sbjct:  331 LDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLGSMPDIEFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKAA 508          
BLAST of CN185628 vs. ExPASy Swiss-Prot
Match: ASPR1_ORYSJ (Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2)

HSP 1 Score: 265.388 bits (677), Expect = 2.096e-70
Identity = 122/178 (68.54%), Postives = 149/178 (83.71%), Query Frame = -3
Query:  163 INMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 696
            +++LLA+ +P KICSQ+GLCTFDG  GVS GI+SVV +    ++G     MC+ CEMAVVWMQNQL QN+TQ+ ILNY+N+LCD+LPSPMGES+VDC  L+S+P +SFTIGGK F L P++YILKVGEG AAQCISGF+A+D+ PPRGPLWILGDVFMG YHTVFDY  MRVGFA++A
Sbjct:  332 LDLLLAETQPSKICSQVGLCTFDGKHGVSAGIKSVVDDEAGESNGLQSGPMCNACEMAVVWMQNQLAQNKTQDLILNYINQLCDKLPSPMGESSVDCGSLASMPEISFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGAYHTVFDYGKMRVGFAKSA 509          
BLAST of CN185628 vs. ExPASy Swiss-Prot
Match: CYPR1_CYNCA (Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO1 PE=1 SV=2)

HSP 1 Score: 254.988 bits (650), Expect = 2.832e-67
Identity = 119/178 (66.85%), Postives = 149/178 (83.71%), Query Frame = -3
Query:  163 INMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 696
            I MLL++++P+KICSQ+ LC+FDGS   SM IESVV ++  ++SG      C  C   VVWMQNQ++QN+T+E I+NYV++LC+RLPSPMGESAVDCS LSS+P ++FT+GGK F+L+P+QY+LKVGEG  AQCISGF+A+DVAPP GPLWILGDVFMG YHTVFDY N+RVGFAEAA
Sbjct:  298 IEMLLSEEQPEKICSQMKLCSFDGSHDTSMIIESVVDKSKGKSSG--LPMRCVPCARWVVWMQNQIRQNETEENIINYVDKLCERLPSPMGESAVDCSSLSSMPNIAFTVGGKTFNLSPEQYVLKVGEGATAQCISGFTAMDVAPPHGPLWILGDVFMGQYHTVFDYGNLRVGFAEAA 473          
BLAST of CN185628 vs. ExPASy Swiss-Prot
Match: ASPRX_ORYSJ (Aspartic proteinase OS=Oryza sativa subsp. japonica GN=RAP PE=2 SV=2)

HSP 1 Score: 235.728 bits (600), Expect = 1.778e-61
Identity = 108/178 (60.67%), Postives = 139/178 (78.09%), Query Frame = -3
Query:  163 INMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 696
            +N+L+A+ +PQK+CSQ+GLC FDG R VS GIESVV + N  +     DAMCS CEMAVVW++NQL++N+T+E ILNY N+LC+RLPSP GES V C ++S +P ++FTI  K F LTP+QYI+K+ +G    CISGF A D+ PPRGPLWILGDVFMG YHTVFD+   R+GFA++A
Sbjct:  324 LNLLIAQTDPQKVCSQVGLCMFDGKRSVSNGIESVVDKENLGS-----DAMCSVCEMAVVWIENQLRENKTKELILNYANQLCERLPSPNGESTVSCHQISKMPNLAFTIANKTFILTPEQYIVKLEQGGQTVCISGFMAFDIPPPRGPLWILGDVFMGAYHTVFDFGKDRIGFAKSA 496          
BLAST of CN185628 vs. ExPASy Swiss-Prot
Match: CATD_MOUSE (Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.331e-24
Identity = 51/92 (55.43%), Postives = 65/92 (70.65%), Query Frame = -3
Query:  166 LPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEA 441
            +P   GE  + C ++SSLP V   +GGK ++L PD+YILKV +G    C+SGF  +D+ PP GPLWILGDVF+G Y+TVFD  N RVGFA A
Sbjct:  316 VPLIQGEYMIPCEKVSSLPTVYLKLGGKNYELHPDKYILKVSQGGKTICLSGFMGMDIPPPSGPLWILGDVFIGSYYTVFDRDNNRVGFANA 407          
BLAST of CN185628 vs. ExPASy Swiss-Prot
Match: CATD_CHIHA (Cathepsin D OS=Chionodraco hamatus GN=ctsd PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.738e-24
Identity = 51/91 (56.04%), Postives = 65/91 (71.43%), Query Frame = -3
Query:  166 PSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEA 438
            P   GE  V+C  + SLP++SFT+GG+++ LT +QYILKV +     C+SGF  LD+  P GPLWILGDVFMG Y+TVFD    RVGFA+A
Sbjct:  305 PLIQGEYMVNCDTVPSLPVISFTVGGQVYTLTGEQYILKVTQAGKTMCLSGFMGLDIPAPAGPLWILGDVFMGQYYTVFDRDANRVGFAKA 395          
BLAST of CN185628 vs. ExPASy Swiss-Prot
Match: CATD_RAT (Cathepsin D OS=Rattus norvegicus GN=Ctsd PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.606e-24
Identity = 49/93 (52.69%), Postives = 68/93 (73.12%), Query Frame = -3
Query:  163 LPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 441
            +P   GE  + C ++SSLPI++F +GG+ ++L P++YILKV +     C+SGF  +D+ PP GPLWILGDVF+G Y+TVFD    RVGFA+AA
Sbjct:  313 VPLIQGEYMIPCEKVSSLPIITFKLGGQNYELHPEKYILKVSQAGKTICLSGFMGMDIPPPSGPLWILGDVFIGCYYTVFDREYNRVGFAKAA 405          
BLAST of CN185628 vs. ExPASy Swiss-Prot
Match: CATD_HUMAN (Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.472e-23
Identity = 48/93 (51.61%), Postives = 65/93 (69.89%), Query Frame = -3
Query:  163 LPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 441
            +P   GE  + C ++S+LP ++  +GGK + L+P+ Y LKV +     C+SGF  +D+ PP GPLWILGDVF+G Y+TVFD  N RVGFAEAA
Sbjct:  318 VPLIQGEYMIPCEKVSTLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVFIGRYYTVFDRDNNRVGFAEAA 410          
BLAST of CN185628 vs. ExPASy Swiss-Prot
Match: CATD_CHICK (Cathepsin D OS=Gallus gallus GN=CTSD PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.922e-23
Identity = 49/90 (54.44%), Postives = 63/90 (70.00%), Query Frame = -3
Query:  169 PSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAE 438
            P   G+  + C ++SSLP+V+  +GGK + LT +QY+ KV       C+SGFS LDV PP GPLWILGDVF+GPY+TVFD  N  VGFA+
Sbjct:  307 PLIKGQYVISCDKISSLPVVTLMLGGKPYQLTGEQYVFKVSAQGETICLSGFSGLDVPPPGGPLWILGDVFIGPYYTVFDRDNDSVGFAK 396          
The following BLAST results are available for this feature:
BLAST of CN185628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
ASPR_CUCPE1.355e-7774.16Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1[more]
ASPR_HORVU3.819e-7270.22Phytepsin OS=Hordeum vulgare PE=1 SV=1[more]
ASPR1_ORYSJ2.096e-7068.54Aspartic proteinase oryzasin-1 OS=Oryza sativa sub... [more]
CYPR1_CYNCA2.832e-6766.85Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO... [more]
ASPRX_ORYSJ1.778e-6160.67Aspartic proteinase OS=Oryza sativa subsp. japonic... [more]
CATD_MOUSE1.331e-2455.43Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1[more]
CATD_CHIHA1.738e-2456.04Cathepsin D OS=Chionodraco hamatus GN=ctsd PE=1 SV... [more]
CATD_RAT6.606e-2452.69Cathepsin D OS=Rattus norvegicus GN=Ctsd PE=1 SV=1[more]
CATD_HUMAN1.472e-2351.61Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1[more]
CATD_CHICK1.922e-2354.44Cathepsin D OS=Gallus gallus GN=CTSD PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001K03_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001K03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185628 ID=CN185628; Name=CN185628; organism=Citrus sinensis; type=EST; length=698bp
CATATAAACAAAGTCCAACGTCATTGGGCTTCTCAACAGCTGTCATACAT
CAGAGCATTTACATAGAACAGTTATTTAAGGTTTAGTTTCAACATCTTAA
AGAAACAACTGAAATTCCACGAGGTACGGTTCACTGAGCATAATTTAAAA
CAAACTTATTTACGCGGCTTCAGCAAATCCCACTCTCATGTTGCTGTAGT
CAAAGACTGTGTGGTAGGGACCCATAAAAACATCCCCCAAGATCCAGAGA
GGTCCACGTGGTGGGGCAACATCTAGAGCTGAGAATCCACTTATACATTG
AGCTGCATCTCCCTCGCCCACTTTGAGGATGTACTGATCAGGAGTAAGGT
CAAATATCTTTCCACCAATCGTAAAGGAAACAATAGGCAAGGAAGACAAT
CTGCTACAGTCAACAGCCGATTCTCCCATAGGACTAGGCAACCGATCACA
GAGCTCATTGACATAGTTAAGAATGCGCTCTTGTGTTTGGTTCTGCTTGA
GCTGGTTCTGCATCCACACAACTGCCATCTCACAAGTAGAGCACATTGCA
TCATGGAAACCACCAGATGCTCTATGATTATTCTCAGGAACGACACTCTC
AATGCCCATACTCACACCTCGAGACCCATCAAATGTGCACAAACCAATCT
GTGAGCAAATTTTTTGAGGTTCATCCTTAGCTAAAAGCATATTGATGA
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