CN185579
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185579 vs. ExPASy Swiss-Prot
Match: HS25P_ARATH (25.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.531e-31 Identity = 80/203 (39.41%), Postives = 118/203 (58.13%), Query Frame = 3 Query: 15 RIKAVADNRGSLDHLQR--------SSLNQSQPKKRAAPVSSPGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWP-SQQERVRSGYRRGRTPWAIRETENDYKIRFDVPGMNRNDVKVRVEESMLVIKAEKAQRNEASTDGSTVGEEEEWPTNGYGSYNTRIALPDNIEFEKIKAEVKDGVLYITIPKASSTAKIVDINVQ 596 RI+A S+D +Q+ SS+ + ++ VS G+ D RT++QM++TM+R+ ED T P S + R SG R PW I+E E++ K+RFD+PG+++ DVK+ VE+++LVIK E Q+ E S D W SY TR+ LPDN E +KIKAE+K+GVL+ITIPK K++D+ +Q Sbjct: 41 RIRAQDQRENSIDVVQQGQQKGNQGSSVEKRPQQRLTMDVSPFGLLDPLSPMRTMRQMLDTMDRMFED------TMPVSGRNRGGSGVSEIRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGE--QKKEDSDDS--------WSGRSVSSYGTRLQLPDNCEKDKIKAELKNGVLFITIPKTKVERKVIDVQIQ 227
BLAST of CN185579 vs. ExPASy Swiss-Prot
Match: HS22C_SOYBN (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max GN=HSP22 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.866e-31 Identity = 71/191 (37.17%), Postives = 113/191 (59.16%), Query Frame = 3 Query: 33 DNRGSLDHLQRSSLN---QSQPKKRAAPVSSPGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRFDVPGMNRNDVKVRVEESMLVIKAEKAQRNEASTDGSTVGEEEEWPTNGYGSYNTRIALPDNIEFEKIKAEVKDGVLYITIPKASSTAKIVDINVQ 596 DN + H+ + + +P++ A +S GI D + R+++Q+++TM+R+ ED +T+P + G R PW I++ E++ ++RFD+PG+ + DVKV VE+ MLVIK E G ++ W + Y SY+TR+ LPDN E +K+KAE+K+GVLYITIPK K++D+ VQ Sbjct: 6 DNSVEVQHVSKGDQGTAVEKKPRRTAMDISPFGILDPWSPMRSMRQILDTMDRVFEDT----MTFPGRN----IGGGEIRAPWDIKDEEHEIRMRFDMPGLAKEDVKVSVEDDMLVIKGGHKSEQEH-------GGDDSWSSRTYSSYDTRLKLPDNCEKDKVKAELKNGVLYITIPKTKVERKVIDVQVQ 181
BLAST of CN185579 vs. ExPASy Swiss-Prot
Match: HS22C_PETHY (Small heat shock protein, chloroplastic OS=Petunia hybrida GN=HSP22 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.866e-31 Identity = 74/202 (36.63%), Postives = 120/202 (59.41%), Query Frame = 3 Query: 21 KAVADNRGSLDHLQRSSLNQS----------QPKKRAAPVSSPGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRFDVPGMNRNDVKVRVEESMLVIKAEKAQRNEASTDGSTVGEEEEWPTNGYGSYNTRIALPDNIEFEKIKAEVKDGVLYITIPKASSTAKIVDINVQ 596 +A DN+ + + S+ NQ +P++ A VS G+ D RT++QMM+TM+R+ ED +T+P + R G R PW I++ EN+ K+RFD+PG+++ +VKV VE+ +LVIK E + G+++ W N Y SY+TR++LPDN++ +K+KAE+K+GVL I+IPK K+ D+ ++ Sbjct: 56 QATGDNKDTSVDVHVSNNNQGGNNQGSAVERRPRRMALDVSPFGLLDPMSPMRTMRQMMDTMDRLFEDT----MTFPGSRNR---GTGEIRAPWDIKDDENEIKMRFDMPGLSKEEVKVSVEDDVLVIKGEHKKEES--------GKDDSWGRN-YSSYDTRLSLPDNVDKDKVKAELKNGVLLISIPKTKVEKKVTDVEIK 241
BLAST of CN185579 vs. ExPASy Swiss-Prot
Match: HS21C_SOLLC (Small heat shock protein, chloroplastic OS=Solanum lycopersicum GN=HSP21 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.027e-30 Identity = 75/200 (37.50%), Postives = 116/200 (58.00%), Query Frame = 3 Query: 21 KAVADNRGSLDHLQRSSLN---------QSQPKKRAAPVSSPGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRFDVPGMNRNDVKVRVEESMLVIKAEKAQRNEASTDGSTVGEEEEWPTNGYGSYNTRIALPDNIEFEKIKAEVKDGVLYITIPKASSTAKIVDINV 593 +A DN+ + + SS + +P + A VS G+ D RT++QM++TM+R+ ED +T+P + SG RTPW I + EN+ K+RFD+PG+++ DVKV VE MLVIK E + + ++ W N Y SY+TR++LPDN+ +KIKAE+K+GVL+I+IPK K++D+ + Sbjct: 49 RATGDNKDTSVDVHHSSAQGGNNQGTAVERRPTRMALDVSPFGVLDPMSPMRTMRQMIDTMDRLFEDT----MTFPGRNRA--SGTGEIRTPWDIHDDENEIKMRFDMPGLSKEDVKVSVENDMLVIKGEHKKEEDGR-------DKHSWGRN-YSSYDTRLSLPDNVVKDKIKAELKNGVLFISIPKTEVEKKVIDVQI 234
BLAST of CN185579 vs. ExPASy Swiss-Prot
Match: HS21C_PEA (Small heat shock protein, chloroplastic OS=Pisum sativum GN=HSP21 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.289e-30 Identity = 67/173 (38.73%), Postives = 107/173 (61.85%), Query Frame = 3 Query: 78 QSQPKKRAAPVSSPGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRFDVPGMNRNDVKVRVEESMLVIKAEKAQRNEASTDGSTVGEEEEWPTNGYGSYNTRIALPDNIEFEKIKAEVKDGVLYITIPKASSTAKIVDINVQ 596 + +P++ + +S G+ D + R+++QM++TM+RI ED +T P + G R PW I++ E++ ++RFD+PG+++ DVKV VE+ +LVIK++ + N G E+ W Y Y+TR+ LPDN E EK+KAE+KDGVLYITIPK ++D+ +Q Sbjct: 77 ERKPRRSSIDISPFGLLDPWSPMRSMRQMLDTMDRIFED----AITIPGRN----IGGGEIRVPWEIKDEEHEIRMRFDMPGVSKEDVKVSVEDDVLVIKSDHREEN---------GGEDCWSRKSYSCYDTRLKLPDNCEKEKVKAELKDGVLYITIPKTKIERTVIDVQIQ 232
BLAST of CN185579 vs. ExPASy Swiss-Prot
Match: HS21C_WHEAT (Small heat shock protein, chloroplastic OS=Triticum aestivum GN=HSP21 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.535e-26 Identity = 66/189 (34.92%), Postives = 112/189 (59.26%), Query Frame = 3 Query: 30 ADNRGSLDHLQRSSLNQSQPKKRAAPVSSPGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRFDVPGMNRNDVKVRVEESMLVIKAEKAQRNEASTDGSTVGEEEEWPTNGYGSYNTRIALPDNIEFEKIKAEVKDGVLYITIPKASSTAKIVDINVQ 596 A N G+ Q+ + Q +P++ +S G+ D RT++QM++TM+R+ +D V +P++ R + R R PW I E E + K+RFD+PG++R +V+V VE+ LVI+ E + EA +G G + W SY+ R+ALPD + +++AE+K+GVL +++PK + K++D+ VQ Sbjct: 63 AQNAGN----QQGNAVQRRPRRAGFDISPFGLVDPMSPMRTMRQMLDTMDRLFDD----AVGFPTR--RSPAARARRRMPWDIMEDEKEVKMRFDMPGLSREEVRVMVEDDALVIRGE--HKKEAG-EGQGEGGDGWWKERSVSSYDMRLALPDECDKSQVRAELKNGVLLVSVPKRETERKVIDVQVQ 238
BLAST of CN185579 vs. ExPASy Swiss-Prot
Match: HS26P_ORYSJ (26.7 kDa heat shock protein, chloroplastic OS=Oryza sativa subsp. japonica GN=HSP26.7 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.450e-25 Identity = 63/182 (34.62%), Postives = 107/182 (58.79%), Query Frame = 3 Query: 60 QRSSLNQSQPKKRAA--PVSSPGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQER-VRSGYRRGRTPWAIRETENDYKIRFDVPGMNRNDVKVRVEESMLVIKAEKAQRNEASTDGSTVGEEEEWPTNGYGSYNTRIALPDNIEFEKIKAEVKDGVLYITIPKASSTAKIVDINVQ 596 Q+ + Q +P++ +A +S G+ D RT++QM++TM+RI +D + +P+ R + +G R PW + E + + ++RFD+PG++R +VKV VE+ LVI+ E + +GS G W SY+ R+ALPD + K++AE+K+GVL +T+PK K++D+ VQ Sbjct: 67 QQGNAVQRRPRRSSALDGISPFGLVDPMSPMRTMRQMLDTMDRIFDD---VALGFPATPRRSLATG--EVRMPWDVMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGAEGSGDGW---WKERSVSSYDMRLALPDECDKSKVRAELKNGVLLVTVPKTEVERKVIDVQVQ 240
BLAST of CN185579 vs. ExPASy Swiss-Prot
Match: HS26M_ARATH (26.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP26.5 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.881e-16 Identity = 42/109 (38.53%), Postives = 72/109 (66.06%), Query Frame = 3 Query: 276 IRETENDYKIRFDVPGMNRNDVKVRVEESMLVIKAE-KAQRNEASTDGSTVGEEEEWPTNGYGSYNTRIALPDNIEFEKIKAEVKDGVLYITIPKASSTAK-IVDINVQ 596 ++E ++ YK+R++VPG+ + DVK+ V + +L IK + KA+ + S + E+E W + YG YNT ++LPD+ + E IKAE+K+GVL + IP+ K + +I+V+ Sbjct: 129 VKEQDDCYKLRYEVPGLTKEDVKITVNDGILTIKGDHKAEEEKGSPE-----EDEYWSSKSYGYYNTSLSLPDDAKVEDIKAELKNGVLNLVIPRTEKPKKNVQEISVE 232
BLAST of CN185579 vs. ExPASy Swiss-Prot
Match: HS23C_CHERU (Small heat shock protein, chloroplastic OS=Chenopodium rubrum GN=HSP23 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.457e-16 Identity = 57/172 (33.14%), Postives = 89/172 (51.74%), Query Frame = 3 Query: 90 KKRAAPVSSPG---------IWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRFDVPGMNRNDVKVRVEESMLVIKAEKAQRNEASTDGSTVGEEEEWPTNGYGSYNTRIALPDNI-EFEKIKAEVKDGVLYITIPKASSTAK 575 + AP+S G ++D F A R+V Q+M M+++ME+PF R R R W +RE E +++ D+PG+ + DVKV VE++ L+IK+E + E EEE+ Y++RI L N+ + + IKAE+K+GVL +T+PK K Sbjct: 47 RSNRAPISRRGDFPASFFSDVFDPFRATRSVGQLMNLMDQLMENPF---------MAASRGSGRAMRRGWDVREDEEALELKVDMPGLAKEDVKVSVEDNTLIIKSEAEKETE---------EEEQ-----RRRYSSRIELTPNLYKIDGIKAEMKNGVLKVTVPKIKEEEK 195
BLAST of CN185579 vs. ExPASy Swiss-Prot
Match: HS23M_ARATH (23.6 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.6 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.190e-16 Identity = 58/161 (36.02%), Postives = 92/161 (57.14%), Query Frame = 3 Query: 78 QSQPKKRAAPVSSPGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRFDVPGMNRNDVKVRVEESMLVIKAEKAQRNEASTDGSTVGEEEEWPTNGYGSYNTRIALPDNI-EFEKIKAEVKDGVLYITIPK 557 +S P++R S ++D F R+V Q++ M++ ME+P + + SG RRG W I+E ++ +R D+PG++R DVK+ +E+ LVI+ E +NE DG GE +G + +RI LPD I + ++IKAE+K+GVL + IPK Sbjct: 55 RSVPRRRGDFFSD--VFDPFSPTRSVSQVLNLMDQFMENPLL-----SATRGMGASGARRG---WDIKEKDDALYLRIDMPGLSREDVKLALEQDTLVIRGE--GKNE--EDGGEEGE------SGNRRFTSRIGLPDKIYKIDEIKAEMKNGVLKVVIPK 195 The following BLAST results are available for this feature:
BLAST of CN185579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185579 ID=CN185579; Name=CN185579; organism=Citrus sinensis; type=EST; length=733bpback to top |