CN185576
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185576 vs. ExPASy Swiss-Prot
Match: TTG1_ARATH (Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana GN=TTG1 PE=1 SV=1) HSP 1 Score: 407.912 bits (1047), Expect = 3.333e-113 Identity = 196/221 (88.69%), Postives = 210/221 (95.02%), Query Frame = -3 Query: 142 LNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 804 LNNSK+SEFCAPLTSFDWN++EPKR+GTCSIDTTCTIWDIEK VVETQLIAHDKEV+DI WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPT+PVAELERH+A VNAIAWAPQS +HICS GDD+QA IWE LP VAGPNGIDPMS+YSAGSEINQLQWS +QPDW+ IAF+NKMQLL+V Sbjct: 123 LNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWE--LPTVAGPNGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341
BLAST of CN185576 vs. ExPASy Swiss-Prot
Match: LWD1_ARATH (WD repeat-containing protein LWD1 OS=Arabidopsis thaliana GN=LWD1 PE=2 SV=1) HSP 1 Score: 335.88 bits (860), Expect = 1.610e-91 Identity = 158/221 (71.49%), Postives = 184/221 (83.26%), Query Frame = -3 Query: 142 LNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 804 LN++K+SEFC PLTSFDWNE EP+RIGT S DTTCTIWDIE+ V+TQLIAHDKEV+DI WG VFASVSADGSVR+FDLRDKEHSTIIYES +PDTPL+RL WNKQD RYMATI+MDS KVV+LDIR P LPV EL+RH+A VNAIAWAP S HIC+ GDDSQA IW++ G+DP+ Y+AG+EI QLQWS +QPDW+AIAFS K+Q+L+V Sbjct: 126 LNSNKNSEFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSMGQHVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346
BLAST of CN185576 vs. ExPASy Swiss-Prot
Match: LWD2_ARATH (WD repeat-containing protein LWD2 OS=Arabidopsis thaliana GN=LWD2 PE=2 SV=1) HSP 1 Score: 330.102 bits (845), Expect = 8.833e-90 Identity = 154/221 (69.68%), Postives = 183/221 (82.81%), Query Frame = -3 Query: 142 LNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 804 L++ K+SEF P+TSFDWNE EP+RIGT SIDTTCTIWDIE+ VV+TQLIAHDKEVYDI WG VFASVS DGSVR+FDLRDKEHSTIIYES +P TPL+RL+WNKQD RYMAT++M S K+V+LDIR P LPV EL+RH+A VNAIAWAP S HICS GDDSQA IW++ G+DP+ Y+AG+E+ QLQWS +QPDW+AIAFSNK+Q+L+V Sbjct: 126 LSSDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDIAWGGVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIMGSAKIVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQHVEGGLDPILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILRV 346
BLAST of CN185576 vs. ExPASy Swiss-Prot
Match: DCAF7_MOUSE (DDB1- and CUL4-associated factor 7 OS=Mus musculus GN=Dcaf7 PE=2 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 1.417e-71 Identity = 137/236 (58.05%), Postives = 166/236 (70.34%), Query Frame = -3 Query: 142 LNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVV-----------ETQLIAHDKEVYDICWGEAR----VFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 804 LNN+K+S+FCAPLTSFDWNE++P +GT SIDTTCTIW +E G V +TQLIAHDKEVYDI + A +FASV ADGSVR+FDLR EHSTIIYE PQ PLLRL WNKQD Y+AT+ MD +VVILD+R P PVA L HRACVN IAWAP S HIC+ DD QA IW++ P A DP+ Y+A EIN +QW+ QPDW+AI ++N +++L+V Sbjct: 111 LNNNKNSDFCAPLTSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHH-PLLRLCWNKQDPNYLATMAMDGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMPRAIE---DPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV 342
BLAST of CN185576 vs. ExPASy Swiss-Prot
Match: DCAF7_HUMAN (DDB1- and CUL4-associated factor 7 OS=Homo sapiens GN=DCAF7 PE=1 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 1.417e-71 Identity = 137/236 (58.05%), Postives = 166/236 (70.34%), Query Frame = -3 Query: 142 LNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVV-----------ETQLIAHDKEVYDICWGEAR----VFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 804 LNN+K+S+FCAPLTSFDWNE++P +GT SIDTTCTIW +E G V +TQLIAHDKEVYDI + A +FASV ADGSVR+FDLR EHSTIIYE PQ PLLRL WNKQD Y+AT+ MD +VVILD+R P PVA L HRACVN IAWAP S HIC+ DD QA IW++ P A DP+ Y+A EIN +QW+ QPDW+AI ++N +++L+V Sbjct: 111 LNNNKNSDFCAPLTSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHH-PLLRLCWNKQDPNYLATMAMDGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMPRAIE---DPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV 342
BLAST of CN185576 vs. ExPASy Swiss-Prot
Match: DCAF7_DICDI (DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum GN=wdr68 PE=3 SV=2) HSP 1 Score: 266.159 bits (679), Expect = 1.566e-70 Identity = 133/216 (61.57%), Postives = 162/216 (75.00%), Query Frame = -3 Query: 142 SEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGEAR-VFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 786 SEFCAPL+SFDWNE +P + T SIDTTCTIW+IE G +TQLIAHDKEV+DI + +FASV ADGS+R+FDLR+ EHSTIIYE+P PLLRL WNKQD Y+ATI DS KV+ILDIR P++P AEL H++ VN I+WAP S HIC+V DD QA IW+L P DP+ Y+A +EINQL WS +QPDW+AIAFS+ +Q+LKV Sbjct: 114 SEFCAPLSSFDWNETDPSLLATSSIDTTCTIWNIETGQAKTQLIAHDKEVFDIAFARGTDLFASVGADGSLRMFDLRNLEHSTIIYETPS-FVPLLRLCWNKQDPNYLATIQQDSPKVIILDIRVPSVPAAELVFHKSAVNGISWAPHSSCHICTVSDDKQALIWDLSSMPKPIE---DPLLTYNALAEINQLSWSSSQPDWIAIAFSSHLQILKV 325
BLAST of CN185576 vs. ExPASy Swiss-Prot
Match: YBE8_SCHPO (Uncharacterized WD repeat-containing protein C17D11.08 OS=Schizosaccharomyces pombe GN=SPBC17D11.08 PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.211e-38 Identity = 98/268 (36.57%), Postives = 130/268 (48.51%), Query Frame = -3 Query: 142 APLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICW--GEARVFASVSADGSVRIFDLRDKEHSTIIYE---------------SPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLP----------------------------------------PVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 774 APLTSFDW + +P I S+DTTCT+WDI +TQLIAHDKEVYD+ + VF SV ADGSVR+FDLR +HSTIIYE SP PLLRL+ D+ MAT +S+ V ++DIR P A L H+ VNA+ W P S+ + + GDD +W+L P P+ N P+ + E+N L WS + D LA+ + +++LKV Sbjct: 167 APLTSFDWCKTDPSYIVVSSLDTTCTVWDIVAQQSKTQLIAHDKEVYDVAFLKDSINVFVSVGADGSVRMFDLRSLDHSTIIYEGDSTFWKRNGDYTNASPPVSAPLLRLSACDSDVNLMATFHHNSSDVQMIDIRVPGTAYATLRGHKGDVNAVKWMPGSKSKLATCGDDCVVSLWDLDQPVNPSPAPTLSVSGTTPGMTGSTSEYVTPVSSVNSMRETASPLNADNQYSPLLSWKLEHEVNNLSWS-VKNDGLAVVYGKSLEILKV 433
BLAST of CN185576 vs. ExPASy Swiss-Prot
Match: YP247_YEAST (WD repeat-containing protein YPL247C OS=Saccharomyces cerevisiae GN=YPL247C PE=1 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 8.675e-37 Identity = 99/278 (35.61%), Postives = 131/278 (47.12%), Query Frame = -3 Query: 142 PLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKG-VVETQLIAHDKEVYDICW--GEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPD---------TP-------LLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWEL------------PLPPVAG-----PNGIDPMSMYSAGS--------------------------------EINQLQWSPAQPDWLAIAFSNKMQLLKV 771 P+TSFDWN ++ I + SIDTTC +WD++ V+TQLIAHD EV+D+ + ++FAS DGSVR+FDLR HSTIIYE P TP LLRL + D +AT DSNK++ILD+R+P P+ L+ H + VN I W P R + S GDD Q W+L P + G P+G M+ AGS EIN + W P + DW K Q ++V Sbjct: 245 PITSFDWNTVDTNLIISSSIDTTCIVWDLQSSHYVKTQLIAHDSEVFDVRFLTKSTQLFASCGGDGSVRVFDLRSLAHSTIIYEPPSSSVSGATAGTITPSSKGSDALLRLEPSPYDPNVLATFAADSNKIIILDMRNPESPILNLQGHGSSVNGIKWHPTKRNVLLSCGDDCQVLYWDLNSSFMEINAAGSKSPSIHGTSLEDPDGDTEMTDGGAGSGLNEDPLSLNNNSKQVCKTLETPNMMYANKTQEINNIAWRPQRGDWFGCVSGKKFQNVRV 522
BLAST of CN185576 vs. ExPASy Swiss-Prot
Match: HAT2_ASHGO (Histone acetyltransferase type B subunit 2 OS=Ashbya gossypii GN=HAT2 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.794e-11 Identity = 52/189 (27.51%), Postives = 91/189 (48.15%), Query Frame = -3 Query: 181 SIDTTCTIWDIEKGVVETQLI-AHDKEVYDICWGE--ARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVA-----GPNGIDPMSMYSAG--SEINQLQWSPAQPDWL 717 S DTT +WDIE ++ +HD V D+ W E + VF +VS D ++++ D R + + +P L+++K +A +DS ++ + D+R + P+ + H+ V + ++P + ICS G D +A IW+L +G + M AG S +N+ ++P P WL Sbjct: 206 SDDTTVALWDIEAAKKPKSILTSHDDIVNDVKWHEFESNVFGTVSEDKTLQVHDKRVRLEPV---KKLPTASPFNTLSFSKHSRNLLAAAGVDS-QIYLYDMRDMSSPLHVMSGHQDSVTTVEFSPHTDGIICSSGSDRRAIIWDLTQIGAEQSQDDADDGAPELMMMHAGHRSPVNEFSFNPQIP-WL 389
BLAST of CN185576 vs. ExPASy Swiss-Prot
Match: GRWD1_MOUSE (Glutamate-rich WD repeat-containing protein 1 OS=Mus musculus GN=Grwd1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.177e-11 Identity = 52/211 (24.64%), Postives = 95/211 (45.02%), Query Frame = -3 Query: 190 SFDWNEIEPKRIGTCSIDTTCTIWDIEKG----VVETQLIAHDKEVYDICWG--EARVFASVSADGSVRIFDLRDKE-HSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRS--PTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPL--PPVAGPNGIDP---------MSMYSAGSEINQLQWSPAQP 762 + DW+ P R+ T +W +G V + + H + V D+ W E VFAS SAD S+RI+D+R + ++ + D + ++W++++ ++ D + + D+R PVA ++H A V ++ W PQ + G D+Q W+L + P G DP + ++ +++ +L W P P Sbjct: 219 ALDWSPRVPGRLLTGDCQKNVHLWTPTEGGSWNVDQRPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTATAHDGDVNVISWSRREPFLLSG--GDDGALKVWDLRQFKSGSPVATFKQHMAPVTSVEWHPQDSGVFAASGADNQITQWDLAVERDPEPGETETDPGLAALPQQLLFVHQGETDLKELHWHPQCP 427 The following BLAST results are available for this feature:
BLAST of CN185576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185576 ID=CN185576; Name=CN185576; organism=Citrus sinensis; type=EST; length=806bpback to top |