CN185560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185560 vs. ExPASy Swiss-Prot
Match: Y1736_ARATH (REF/SRPP-like protein At1g67360 OS=Arabidopsis thaliana GN=At1g67360 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.401e-38 Identity = 75/128 (58.59%), Postives = 94/128 (73.44%), Query Frame = -3 Query: 262 VDEASRKFDEHAPPLAKRVASQVHSLIETASQKAQHLVSEAQTGGPRAAVHYAAVESKHLLVTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVPIDDIAKAFKQ 645 V E S KFDEHAPP+AK+V +Q H LI A++KAQ V EA+TGGP+AA +YAA E K +VTNSVK W KLN Y H M D A+P AA +S +YN LV +MT GY++ GYLPLVP+DDI KA+++ Sbjct: 81 VGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGGPKAAFNYAATEYKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHFSSRYNDLVTDMTNMGYSLVGYLPLVPVDDIVKAYEK 208
BLAST of CN185560 vs. ExPASy Swiss-Prot
Match: Y3550_ARATH (REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana GN=At3g05500 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.856e-15 Identity = 54/145 (37.24%), Postives = 73/145 (50.34%), Query Frame = -3 Query: 262 VDEASRKFDEHAPPLAKRVASQVHSLIETASQKAQHLVSEAQTGG-----------------PRAAVHYAAVESKHLLVTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVPIDDIAKAFKQ 645 VD + + D PP+ K+V++Q S + A A+ L SE + G P A YA E K +V AW KLN LF +A +AVPTAA S+KYN VV+ +KGY V Y+PLVP + I+K F + Sbjct: 90 VDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVARALASEVRRAGVVETASGMAKSVYSKYEPAAKELYANYEPK--AEQCAVSAWKKLNQLPLFPRLAQVAVPTAAFCSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIFAE 232
BLAST of CN185560 vs. ExPASy Swiss-Prot
Match: SRP_VITRI (Stress-related protein OS=Vitis riparia GN=SRP PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.158e-14 Identity = 45/120 (37.50%), Postives = 66/120 (55.00%), Query Frame = -3 Query: 265 EHAPPLAKRVASQVH--SLIETASQKAQHLVSEAQTGGPRAAVHYAAVESKHLLVTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVPIDDIAKAFK 618 + AP LA VAS+V +++TA +++ S+ + Y V ++ +V AW LN LF +A + VPTAA WS+KYN V ++GYTV YLPL+P + IAK F+ Sbjct: 115 QKAPELALAVASEVQRPGVVDTAKNITKNVYSKCEPTAKELCSKYEPVAEQY-----AVSAWRSLNRLPLFPQVAQVVVPTAAYWSEKYNQSVSYTAERGYTVALYLPLIPTERIAKVFQ 229
BLAST of CN185560 vs. ExPASy Swiss-Prot
Match: SRP_PHAVU (Stress-related protein OS=Phaseolus vulgaris GN=SRP PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.042e-12 Identity = 43/125 (34.40%), Postives = 60/125 (48.00%), Query Frame = -3 Query: 268 DEASRKFDEHAPPLAKRVASQVHSLIETASQKAQHLVSEAQTGGPRAAVHYAAVESKHLLVTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVPIDDIAKAF 642 D + D H P K+V+SQ S+ VSE + G + + +V AW KLN LF +A+ +P AA ++KYN ++V +KGY V YLPLVP + IAK F Sbjct: 51 DRKVGELDRHVPSNVKKVSSQARSV-----------VSEVRRDGVSTFAKTVYSKYEPTAEQCAVSAWRKLNQLPLFPQVANAVLPKAAYCTEKYNEVIVSSAEKGYRVSAYLPLVPTEKIAKVF 164
BLAST of CN185560 vs. ExPASy Swiss-Prot
Match: SRPP_HEVBR (Small rubber particle protein OS=Hevea brasiliensis GN=SRPP PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.268e-11 Identity = 44/128 (34.38%), Postives = 67/128 (52.34%), Query Frame = -3 Query: 268 VDEASRKFDEHAPPLAKRVASQVHSLIETASQKAQHLVSEAQTGGPR--AAVHYAAVESKHLLVTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVPIDDIAKAF 645 VD + D PP+ K+V++Q +S+ + A + + S G + A YA +E K +V W LN L +A++ VPTA +S+KYN +V T++GY V YLPL+P + I K F Sbjct: 74 VDVSVTSLDGVVPPVIKQVSAQTYSVAQDAPRIVLDVASSVFNTGVQEGAKALYANLEPK--AEQYAVITWRALNKLPLVPQVANVVVPTAVYFSEKYNDVVRGTTEQGYRVSSYLPLLPTEKITKVF 199 The following BLAST results are available for this feature:
BLAST of CN185560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185560 ID=CN185560; Name=CN185560; organism=Citrus sinensis; type=EST; length=647bpback to top |