CN185553

Overview
NameCN185553
Unique NameCN185553
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length682
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3195 contig Csv1_Contig3195:81..761. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CN185553 vs. ExPASy Swiss-Prot
Match: IF4A8_TOBAC (Eukaryotic initiation factor 4A-8 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.529e-51
Identity = 96/108 (88.89%), Postives = 105/108 (97.22%), Query Frame = 3 
Query:  129 MAGLAPEGSQFDARQYDTQMNELLSTDGQDFFTSYDEVYDSFDAMGLRENLLRGIYAYGFEKPSAIQQRGIVPFCKGREVIQQAQSGTGKTATFCSGILQQLDYGLVQ 452
            MA LAP+G+QFDARQYD++MN+LL+ DG+DFFTSYDEVYDSFDAMGL+ENLLRGIYAYGFEKPSAIQQRGIVPFCKG +VIQQAQSGTGKTATFCSGILQQLDYGLVQ
Sbjct:    1 MARLAPDGAQFDARQYDSKMNDLLAADGKDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQ 108

HSP 2 Score: 148.288 bits (373), Expect = 3.577e-35
Identity = 75/91 (82.42%), Postives = 80/91 (87.91%), Query Frame = 1 
Query:  421 FCSNLIMVLS----KCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVQVAVGTPGRVFDMLRRQSLRPDYIK 681
            FCS ++  L     +CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL AGV V VGTPGRVFDMLRRQSLRPDY++
Sbjct:   94 FCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILAAGVHVIVGTPGRVFDMLRRQSLRPDYLR 184
[Close]
BLAST of CN185553 vs. ExPASy Swiss-Prot
Match: IF415_TOBAC (Eukaryotic initiation factor 4A-15 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 7.862e-51
Identity = 97/108 (89.81%), Postives = 103/108 (95.37%), Query Frame = 3 
Query:  129 MAGLAPEGSQFDARQYDTQMNELLSTDGQDFFTSYDEVYDSFDAMGLRENLLRGIYAYGFEKPSAIQQRGIVPFCKGREVIQQAQSGTGKTATFCSGILQQLDYGLVQ 452
            MAG APEGSQFDARQ+DT+MNELLS DGQDFFTSYDEVYDSFDAMGL+ENLLRGIYAYGFEKPSAIQQRGIVPFCKG +VIQQAQSGTGKTATFCSGILQQL Y L++
Sbjct:    1 MAGAAPEGSQFDARQFDTKMNELLSADGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLAYELLE 108

HSP 2 Score: 144.436 bits (363), Expect = 5.165e-34
Identity = 74/91 (81.32%), Postives = 80/91 (87.91%), Query Frame = 1 
Query:  421 FCSNLIMVLS----KCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVQVAVGTPGRVFDMLRRQSLRPDYIK 681
            FCS ++  L+    +CQALVLAPTRELAQQIEKVMRALGDYLGVKV ACVGGTSVREDQRIL +GV V VGTPGRVFDMLRRQSLRPD+IK
Sbjct:   94 FCSGILQQLAYELLECQALVLAPTRELAQQIEKVMRALGDYLGVKVTACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDHIK 184
[Close]
BLAST of CN185553 vs. ExPASy Swiss-Prot
Match: IF4A7_TOBAC (Eukaryotic initiation factor 4A-7 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 6.656e-50
Identity = 94/108 (87.04%), Postives = 102/108 (94.44%), Query Frame = 3 
Query:  129 MAGLAPEGSQFDARQYDTQMNELLSTDGQDFFTSYDEVYDSFDAMGLRENLLRGIYAYGFEKPSAIQQRGIVPFCKGREVIQQAQSGTGKTATFCSGILQQLDYGLVQ 452
            MAGLAPEGSQFDARQYD +M ELL T+ ++FFTSYDEVYDSFDAMGL+ENLLRGIYAYGFEKPSAIQQRGIVPFCKG +VIQQAQSGTGKTATFCSG+LQQLDY LV+
Sbjct:    1 MAGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVE 108

HSP 2 Score: 149.443 bits (376), Expect = 1.606e-35
Identity = 76/91 (83.52%), Postives = 81/91 (89.01%), Query Frame = 1 
Query:  421 FCSNLIMVLS----KCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVQVAVGTPGRVFDMLRRQSLRPDYIK 681
            FCS ++  L     +CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ+GV V VGTPGRVFDMLRRQSLRPD+IK
Sbjct:   94 FCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIK 184
[Close]
BLAST of CN185553 vs. ExPASy Swiss-Prot
Match: IF414_TOBAC (Eukaryotic initiation factor 4A-14 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 6.656e-50
Identity = 94/108 (87.04%), Postives = 102/108 (94.44%), Query Frame = 3 
Query:  129 MAGLAPEGSQFDARQYDTQMNELLSTDGQDFFTSYDEVYDSFDAMGLRENLLRGIYAYGFEKPSAIQQRGIVPFCKGREVIQQAQSGTGKTATFCSGILQQLDYGLVQ 452
            MAGLAPEGSQFDARQYD +M ELL T+ ++FFTSYDEVYDSFDAMGL+ENLLRGIYAYGFEKPSAIQQRGIVPFCKG +VIQQAQSGTGKTATFCSG+LQQLDY LV+
Sbjct:    1 MAGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVE 108

HSP 2 Score: 149.443 bits (376), Expect = 1.606e-35
Identity = 76/91 (83.52%), Postives = 81/91 (89.01%), Query Frame = 1 
Query:  421 FCSNLIMVLS----KCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVQVAVGTPGRVFDMLRRQSLRPDYIK 681
            FCS ++  L     +CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ+GV V VGTPGRVFDMLRRQSLRPD+IK
Sbjct:   94 FCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIK 184
[Close]
BLAST of CN185553 vs. ExPASy Swiss-Prot
Match: IF413_TOBAC (Eukaryotic initiation factor 4A-13 (Fragment) OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 6.656e-50
Identity = 94/108 (87.04%), Postives = 102/108 (94.44%), Query Frame = 3 
Query:  129 MAGLAPEGSQFDARQYDTQMNELLSTDGQDFFTSYDEVYDSFDAMGLRENLLRGIYAYGFEKPSAIQQRGIVPFCKGREVIQQAQSGTGKTATFCSGILQQLDYGLVQ 452
            MAGLAPEGSQFDARQYD +M ELL T+ ++FFTSYDEVYDSFDAMGL+ENLLRGIYAYGFEKPSAIQQRGIVPFCKG +VIQQAQSGTGKTATFCSG+LQQLDY LV+
Sbjct:    1 MAGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVE 108

HSP 2 Score: 149.443 bits (376), Expect = 1.606e-35
Identity = 76/91 (83.52%), Postives = 81/91 (89.01%), Query Frame = 1 
Query:  421 FCSNLIMVLS----KCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVQVAVGTPGRVFDMLRRQSLRPDYIK 681
            FCS ++  L     +CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ+GV V VGTPGRVFDMLRRQSLRPD+IK
Sbjct:   94 FCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIK 184
[Close]
BLAST of CN185553 vs. ExPASy Swiss-Prot
Match: IF411_TOBAC (Eukaryotic initiation factor 4A-11 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 6.656e-50
Identity = 95/108 (87.96%), Postives = 102/108 (94.44%), Query Frame = 3 
Query:  129 MAGLAPEGSQFDARQYDTQMNELLSTDGQDFFTSYDEVYDSFDAMGLRENLLRGIYAYGFEKPSAIQQRGIVPFCKGREVIQQAQSGTGKTATFCSGILQQLDYGLVQ 452
            MAGLAPEGSQFDARQYD +M ELL T+ Q+FFTSYDEVY+SFDAMGL+ENLLRGIYAYGFEKPSAIQQRGIVPFCKG +VIQQAQSGTGKTATFCSGILQQLDY LV+
Sbjct:    1 MAGLAPEGSQFDARQYDAKMTELLGTEQQEFFTSYDEVYESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYSLVE 108

HSP 2 Score: 148.288 bits (373), Expect = 3.577e-35
Identity = 76/91 (83.52%), Postives = 80/91 (87.91%), Query Frame = 1 
Query:  421 FCSNLIMVLS----KCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVQVAVGTPGRVFDMLRRQSLRPDYIK 681
            FCS ++  L     +CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ+GV V VGTPGRVFDMLRRQSLRPD IK
Sbjct:   94 FCSGILQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDNIK 184
[Close]
BLAST of CN185553 vs. ExPASy Swiss-Prot
Match: IF410_TOBAC (Eukaryotic initiation factor 4A-10 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 6.656e-50
Identity = 94/108 (87.04%), Postives = 102/108 (94.44%), Query Frame = 3 
Query:  129 MAGLAPEGSQFDARQYDTQMNELLSTDGQDFFTSYDEVYDSFDAMGLRENLLRGIYAYGFEKPSAIQQRGIVPFCKGREVIQQAQSGTGKTATFCSGILQQLDYGLVQ 452
            MAGLAPEGSQFDARQYD +M ELL T+ ++FFTSYDEVYDSFDAMGL+ENLLRGIYAYGFEKPSAIQQRGIVPFCKG +VIQQAQSGTGKTATFCSG+LQQLDY LV+
Sbjct:    1 MAGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVE 108

HSP 2 Score: 149.443 bits (376), Expect = 1.606e-35
Identity = 76/91 (83.52%), Postives = 81/91 (89.01%), Query Frame = 1 
Query:  421 FCSNLIMVLS----KCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVQVAVGTPGRVFDMLRRQSLRPDYIK 681
            FCS ++  L     +CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ+GV V VGTPGRVFDMLRRQSLRPD+IK
Sbjct:   94 FCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIK 184
[Close]
BLAST of CN185553 vs. ExPASy Swiss-Prot
Match: IF4A9_TOBAC (Eukaryotic initiation factor 4A-9 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.529e-49
Identity = 94/107 (87.85%), Postives = 101/107 (94.39%), Query Frame = 3 
Query:  129 MAGLAPEGSQFDARQYDTQMNELLSTDGQDFFTSYDEVYDSFDAMGLRENLLRGIYAYGFEKPSAIQQRGIVPFCKGREVIQQAQSGTGKTATFCSGILQQLDYGLV 449
            MAG APEGSQFDARQYD++M ELL+ +GQDFFTSYDEVY SFDAMGL+ENLLRGIYAYGFEKPSAIQQRGIVPFCKG +VIQQAQSGTGKTATFCSGILQQLDY L+
Sbjct:    1 MAGAAPEGSQFDARQYDSKMTELLNAEGQDFFTSYDEVYHSFDAMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYELL 107

HSP 2 Score: 147.132 bits (370), Expect = 7.968e-35
Identity = 75/91 (82.42%), Postives = 79/91 (86.81%), Query Frame = 1 
Query:  421 FCSNLIMVLS----KCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVQVAVGTPGRVFDMLRRQSLRPDYIK 681
            FCS ++  L      CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL +GV V VGTPGRVFDMLRRQSLRPD+IK
Sbjct:   94 FCSGILQQLDYELLDCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDHIK 184
[Close]
BLAST of CN185553 vs. ExPASy Swiss-Prot
Match: IF4A2_NICPL (Eukaryotic initiation factor 4A-2 OS=Nicotiana plumbaginifolia PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 9.611e-49
Identity = 92/108 (85.19%), Postives = 101/108 (93.52%), Query Frame = 3 
Query:  129 MAGLAPEGSQFDARQYDTQMNELLSTDGQDFFTSYDEVYDSFDAMGLRENLLRGIYAYGFEKPSAIQQRGIVPFCKGREVIQQAQSGTGKTATFCSGILQQLDYGLVQ 452
            MAG APEGSQFDARQ+D +M ELL T+ ++FFTSYDEVYDSFDAMGL+ENLLRGIYAYGFEKPSAIQQRGIVPFCKG +VIQQAQSGTGKTATFCSG+LQQLDY LV+
Sbjct:    1 MAGSAPEGSQFDARQFDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVE 108

HSP 2 Score: 149.443 bits (376), Expect = 1.606e-35
Identity = 76/91 (83.52%), Postives = 81/91 (89.01%), Query Frame = 1 
Query:  421 FCSNLIMVLS----KCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVQVAVGTPGRVFDMLRRQSLRPDYIK 681
            FCS ++  L     +CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ+GV V VGTPGRVFDMLRRQSLRPD+IK
Sbjct:   94 FCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIK 184
[Close]
BLAST of CN185553 vs. ExPASy Swiss-Prot
Match: IF4A3_ORYSJ (Eukaryotic initiation factor 4A-3 OS=Oryza sativa subsp. japonica GN=Os02g0146600 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.534e-46
Identity = 90/109 (82.57%), Postives = 101/109 (92.66%), Query Frame = 3 
Query:  129 MAGLAPEGSQFDARQYDTQMNELLST-DGQDFFTSYDEVYDSFDAMGLRENLLRGIYAYGFEKPSAIQQRGIVPFCKGREVIQQAQSGTGKTATFCSGILQQLDYGLVQ 452
            MAG+APEGSQFDA+ YD++M ELL   D ++FFTSYDEV++SFD MGL+ENLLRGIYAYGFEKPSAIQQRGIVPFCKG +VIQQAQSGTGKTATFCSGILQQLDYGLV+
Sbjct:    1 MAGMAPEGSQFDAKHYDSKMQELLHQGDNEEFFTSYDEVFESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVE 109

HSP 2 Score: 146.362 bits (368), Expect = 1.359e-34
Identity = 74/91 (81.32%), Postives = 80/91 (87.91%), Query Frame = 1 
Query:  421 FCSNLIMVLS----KCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVQVAVGTPGRVFDMLRRQSLRPDYIK 681
            FCS ++  L     +CQ+LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL +GV V VGTPGRVFDMLRRQSLRPD+IK
Sbjct:   95 FCSGILQQLDYGLVECQSLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDHIK 185
The following BLAST results are available for this feature:
BLAST of CN185553 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 478
Match NameE-valueIdentityDescription
IF4A8_TOBAC3.529e-5188.89Eukaryotic initiation factor 4A-8 OS=Nicotiana tab... [more]
IF415_TOBAC7.862e-5189.81Eukaryotic initiation factor 4A-15 OS=Nicotiana ta... [more]
IF4A7_TOBAC6.656e-5087.04Eukaryotic initiation factor 4A-7 OS=Nicotiana tab... [more]
IF414_TOBAC6.656e-5087.04Eukaryotic initiation factor 4A-14 OS=Nicotiana ta... [more]
IF413_TOBAC6.656e-5087.04Eukaryotic initiation factor 4A-13 (Fragment) OS=N... [more]
IF411_TOBAC6.656e-5087.96Eukaryotic initiation factor 4A-11 OS=Nicotiana ta... [more]
IF410_TOBAC6.656e-5087.04Eukaryotic initiation factor 4A-10 OS=Nicotiana ta... [more]
IF4A9_TOBAC2.529e-4987.85Eukaryotic initiation factor 4A-9 OS=Nicotiana tab... [more]
IF4A2_NICPL9.611e-4985.19Eukaryotic initiation factor 4A-2 OS=Nicotiana plu... [more]
IF4A3_ORYSJ1.534e-4682.57Eukaryotic initiation factor 4A-3 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001I07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001I07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185553 ID=CN185553; Name=CN185553; organism=Citrus sinensis; type=EST; length=682bp
GCAGGCCGAGGAGTTTGGTAACCCTAGCAACTATTTTCTCTTAGATCAAT
CTTCTCCTTCTCTTTGAAGAAAAAAGAAAACCAACTCTTTCTCTCGATTT
TAATCGCCAGCATCAAAGCTTTGCAGATATGGCTGGTTTGGCACCCGAAG
GATCTCAATTTGATGCTCGTCAGTATGACACCCAGATGAATGAACTGCTC
TCTACTGATGGGCAAGATTTCTTCACTTCTTATGATGAAGTTTATGACAG
TTTTGATGCAATGGGACTGCGGGAAAACCTTTTGAGGGGAATCTATGCCT
ATGGGTTTGAGAAGCCCTCTGCTATTCAGCAAAGGGGAATTGTTCCCTTC
TGCAAGGGACGTGAGGTCATTCAGCAGGCTCAGTCTGGAACTGGGAAAAC
AGCAACTTTCTGCTCTGGAATTTTGCAGCAACTTGATTATGGTCTTGTCC
AAGTGTCAGGCCCTGGTATTGGCACCCACTAGGGAACTAGCTCAACAGAT
TGAGAAAGTAATGAGGGCACTTGGTGATTATCTTGGTGTTAAGGTTCATG
CTTGTGTCGGTGGGACAAGTGTTCGCGAGGATCAGCGCATTCTTCAAGCT
GGTGTTCAGGTTGCTGTTGGCACTCCGGGTCGTGTGTTTGACATGCTGCG
CCGACAGTCTTTACGCCCTGATTACATTAAGA
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